BLASTX nr result
ID: Cornus23_contig00023555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00023555
(1121 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012070606.1| PREDICTED: uncharacterized protein LOC105632... 104 2e-19
emb|CDP17738.1| unnamed protein product [Coffea canephora] 92 6e-16
ref|XP_011629152.1| PREDICTED: probable RNA 3'-terminal phosphat... 82 6e-13
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 80 4e-12
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 78 1e-11
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera] 75 1e-10
emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera] 74 3e-10
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 67 4e-08
gb|KQL05447.1| hypothetical protein SETIT_004631mg [Setaria ital... 65 8e-08
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712... 65 1e-07
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera] 65 1e-07
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 65 1e-07
gb|KQK90171.1| hypothetical protein SETIT_039667mg [Setaria ital... 64 2e-07
gb|KJB48829.1| hypothetical protein B456_008G089200 [Gossypium r... 64 3e-07
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 63 4e-07
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 63 4e-07
ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, part... 62 7e-07
ref|XP_006404906.1| hypothetical protein EUTSA_v10000715mg [Eutr... 62 7e-07
gb|KHN40696.1| Retrovirus-related Pol polyprotein from transposo... 62 9e-07
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 62 9e-07
>ref|XP_012070606.1| PREDICTED: uncharacterized protein LOC105632772 [Jatropha curcas]
Length = 411
Score = 104 bits (259), Expect = 2e-19
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Frame = -3
Query: 339 SDSGKNSEPSRSDFVRRTMLSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIAL-DAK 163
+D KN+ + + + R ++SNARF VE FDGT +FG+WQ E+LD LF++G +A+ + K
Sbjct: 2 ADGKKNTTTTITSNLGRNVVSNARFTVEIFDGTGHFGIWQSELLDALFQQGLDVAIEEEK 61
Query: 162 PKDFSYEDWNFMNRQACGTIRLCLAKDQKYFVMKETMATSPWKKLE 25
P +W +NR ACGTIR CL+++QKY KET A WK LE
Sbjct: 62 PTKMEESEWRTINRLACGTIRSCLSREQKYVFSKETSANKLWKALE 107
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 92.4 bits (228), Expect = 6e-16
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = -3
Query: 291 RTMLSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALDAKPKD-FSYEDWNFMNRQA 115
R +S+ + VE FDGT +FGMWQ EV+D LF++G IA++ K D ++W+ +NR A
Sbjct: 27 RIPMSSLKVAVETFDGTGHFGMWQGEVMDSLFQQGLDIAIEEKKSDDIEEKEWSTINRLA 86
Query: 114 CGTIRLCLAKDQKYFVMKETMATSPWKKLE 25
CGTIR CL+K+QKY ET A WK LE
Sbjct: 87 CGTIRSCLSKEQKYAFKNETSAWKLWKALE 116
>ref|XP_011629152.1| PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein
[Amborella trichopoda]
Length = 364
Score = 82.4 bits (202), Expect = 6e-13
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIAL---DAKPKDFSYEDWNFMNRQAC 112
+SN +FEVEKFDG NNFG+WQ V DLL ++ H AL KP+ S EDW ++ +A
Sbjct: 5 VSNEKFEVEKFDGKNNFGIWQINVRDLLVQQDLHKALKGKSKKPESISNEDWEELHLRAM 64
Query: 111 GTIRLCLAKDQKYFVMKETMATSPWKKLE 25
TIR+CL+ ++ + ++ E A+S KLE
Sbjct: 65 STIRMCLSNEELFNIVNEDSASSFLSKLE 93
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 79.7 bits (195), Expect = 4e-12
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = -3
Query: 228 MWQCEVLDLLFREGSHIALDA-KPKDFSYEDWNFMNRQACGTIRLCLAKDQKYFVMKETM 52
MWQ EVLD LF++G IA++ KPK+ +DW+ +NR ACGTIR CL+++QKY V ET
Sbjct: 1 MWQGEVLDSLFQQGLDIAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60
Query: 51 ATSPWKKLE 25
A WK LE
Sbjct: 61 AHKLWKALE 69
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 78.2 bits (191), Expect = 1e-11
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -3
Query: 228 MWQCEVLDLLFREGSHIALDA-KPKDFSYEDWNFMNRQACGTIRLCLAKDQKYFVMKETM 52
MWQ EVLD LF++G A++ KPK+ +DW+ +NR ACGTIR CL+++QKY V ET
Sbjct: 1 MWQGEVLDSLFQQGLDFAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60
Query: 51 ATSPWKKLE 25
A WK LE
Sbjct: 61 AHKLWKALE 69
>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 74.7 bits (182), Expect = 1e-10
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALDAK-PKDFSYEDWNFMNRQACGT 106
+S+A+F+V KFDG NF +WQ V DLL ++G AL K P+ + DW + + T
Sbjct: 4 ISSAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQPEGMNNMDWKDLEVKVAAT 63
Query: 105 IRLCLAKDQKYFVMKETMATSPWKKLE 25
IRLCLA D Y VM E T+ W KLE
Sbjct: 64 IRLCLADDVMYHVMDEESPTAIWLKLE 90
>emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]
Length = 105
Score = 73.6 bits (179), Expect = 3e-10
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIAL-DAKPKDFSYEDWNFMNRQACGT 106
+S+A+F+V KF+G+ NFG+WQ V DLL ++G AL + +P+ DW + + T
Sbjct: 4 ISSAKFDVVKFNGSGNFGLWQRRVKDLLVQQGMVKALYEKQPEGMDDMDWKDLEAKVEAT 63
Query: 105 IRLCLAKDQKYFVMKETMATSPWKKLE 25
IRLCL D Y VM E T+ W KLE
Sbjct: 64 IRLCLVDDVMYHVMDEESPTTIWLKLE 90
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 66.6 bits (161), Expect = 4e-08
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -3
Query: 273 ARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIAL-DAKPKDFSYEDWNFMNRQACGTIRL 97
++FEV KFDGT NF +WQ + DLL ++G AL + P+ + WN M QA TIRL
Sbjct: 7 SKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKAQAAATIRL 66
Query: 96 CLAKDQKYFVMKETMATSPWKKL 28
L+ Y VM E W KL
Sbjct: 67 SLSDSVMYQVMDEKSPKEIWDKL 89
>gb|KQL05447.1| hypothetical protein SETIT_004631mg [Setaria italica]
Length = 98
Score = 65.5 bits (158), Expect = 8e-08
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -3
Query: 264 EVEKFDGTNNFGMWQCEVLDLLFREGSHIALDA-KPKDFSYEDWNFMNRQACGTIRLCLA 88
+V+KFDG NF +W+C +D+L ++ AL+ K + + E+W M +A TIRL L+
Sbjct: 7 QVDKFDGKGNFNVWKCVAIDVLVQQWLIDALERIKSESTTAEEWKVMEWKAASTIRLYLS 66
Query: 87 KDQKYFVMKETMATSPWKKLE 25
+ KY V+KE + WK+LE
Sbjct: 67 DEVKYSVIKENSSKKLWKRLE 87
>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix
dactylifera]
Length = 2199
Score = 64.7 bits (156), Expect = 1e-07
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = -3
Query: 279 SNARFEVEKFDGTNNFGMWQCEVLDLLFREGSH-IALDAKPKDFSYEDWNFMNRQACGTI 103
SN + + EKFDG NF +WQ V DLL ++ + + + +PK S EDW + A TI
Sbjct: 385 SNLKADFEKFDGKGNFILWQQRVKDLLIQQRIYKVLVKKRPKKISIEDWEELEEIAFSTI 444
Query: 102 RLCLAKDQKYFVMKETMATSPWKKLE 25
R+CLA + ET A W++LE
Sbjct: 445 RMCLADQVLPEICLETTAKELWERLE 470
>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
Length = 347
Score = 64.7 bits (156), Expect = 1e-07
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALDAK-PKDFSYEDWNFMNRQACGT 106
+S+A+F+V KFDG+ NF +W V DLL ++G AL K P+ + DW + + T
Sbjct: 4 ISSAKFDVVKFDGSGNFSLWHRRVKDLLVQQGMVKALYGKQPEGMNDIDWKDLEAKVAAT 63
Query: 105 IRLCLAKDQKYFVMKETMATSPWKKLEI 22
IRLCLA D Y + K +S ++L +
Sbjct: 64 IRLCLANDVMYHMKKANDESSQGERLMV 91
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 64.7 bits (156), Expect = 1e-07
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -3
Query: 270 RFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALDA-KPKDFSYEDWNFMNRQACGTIRLC 94
+F++ KFDG NFG+WQ V DLL ++ AL KP +D M QA TIR C
Sbjct: 89 KFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQLQAAATIRRC 148
Query: 93 LAKDQKYFVMKETMATSPWKKLE 25
L+ Y VM+ET W+KLE
Sbjct: 149 LSDQIMYHVMEETSPKIIWEKLE 171
>gb|KQK90171.1| hypothetical protein SETIT_039667mg [Setaria italica]
Length = 275
Score = 63.9 bits (154), Expect = 2e-07
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -3
Query: 273 ARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALD-AKPKDFSYEDWNFMNRQACGTIRL 97
++FEV +FDGT NFG+WQ V DLL ++G ALD KP + W M QA TIRL
Sbjct: 6 SKFEVARFDGTGNFGLWQTRVKDLLAQQGISRALDEKKPAKVDDDKWEEMQAQARATIRL 65
Query: 96 CLAKDQKY 73
CL+ Y
Sbjct: 66 CLSDQIMY 73
>gb|KJB48829.1| hypothetical protein B456_008G089200 [Gossypium raimondii]
Length = 164
Score = 63.5 bits (153), Expect = 3e-07
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREG-SHIALDAKPKDFSYEDWNFMNRQACGT 106
++ RFE+EKFDG NF +WQ ++ +L + G + KP++ + W ++ +A
Sbjct: 1 MTTTRFEIEKFDGETNFNLWQVRMMAILVQSGLKKVVTRKKPENLNKTKWEELDGKALSV 60
Query: 105 IRLCLAKDQKYFVMKETMATSPWKKLE 25
I+LCLA V+ E +++ WK+LE
Sbjct: 61 IQLCLANTVLQEVLMEKTSSALWKRLE 87
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 63.2 bits (152), Expect = 4e-07
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -3
Query: 273 ARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIAL-DAKPKDFSYEDWNFMNRQACGTIRL 97
++FEV KFDGT NF +WQ + DLL ++G AL + P+ W M QA TIRL
Sbjct: 7 SKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRL 66
Query: 96 CLAKDQKYFVMKETMATSPWKKL 28
L+ Y VM E + W KL
Sbjct: 67 SLSDSVMYQVMDEKTSKEIWVKL 89
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 63.2 bits (152), Expect = 4e-07
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALDA---KPKDFSYEDWNFMNRQAC 112
+S ++EV KF+G N F WQ + DLL ++G H LD KP EDW ++ +A
Sbjct: 1 MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60
Query: 111 GTIRLCLAKDQKYFVMKETMATSPWKKLE 25
IRL L+ D ++ E A W +LE
Sbjct: 61 SAIRLHLSDDVVNNIIDEDTARGIWTRLE 89
>ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, partial [Eutrema
salsugineum] gi|557106278|gb|ESQ46603.1| hypothetical
protein EUTSA_v10000703mg, partial [Eutrema salsugineum]
Length = 162
Score = 62.4 bits (150), Expect = 7e-07
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = -3
Query: 279 SNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIA-LDAKPKDFSYEDWNFMNRQACGTI 103
++ +F++ +F+G NFG+WQ V DLL ++G A L+ KP +DW+ M QA TI
Sbjct: 5 NSLKFDIPRFNGKGNFGLWQSRVKDLLTQQGMKKALLEKKPDKIKQDDWDDMQDQAVSTI 64
Query: 102 RLCLAKDQKYFVMKETMATSPWKKL 28
R CL+ D + K M+ S KL
Sbjct: 65 RFCLSDDITNQLEKMYMSKSLSSKL 89
>ref|XP_006404906.1| hypothetical protein EUTSA_v10000715mg [Eutrema salsugineum]
gi|557106034|gb|ESQ46359.1| hypothetical protein
EUTSA_v10000715mg [Eutrema salsugineum]
Length = 72
Score = 62.4 bits (150), Expect = 7e-07
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -3
Query: 279 SNARFEVEKFDGTNNFGMWQCEVLDLLFREG-SHIALDAKPKDFSYEDWNFMNRQACGTI 103
S+ +F+V +FD NFG+WQ V DLL ++G + L+ KP +DW+ M+ QA TI
Sbjct: 5 SSLKFDVPRFDEKGNFGLWQSRVKDLLTQQGMKKVLLEKKPDKIEKKDWDDMHDQAVSTI 64
Query: 102 RLCLAKD 82
RLCL D
Sbjct: 65 RLCLFDD 71
>gb|KHN40696.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 183
Score = 62.0 bits (149), Expect = 9e-07
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = -3
Query: 282 LSNARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIALDA-KPKDFSYEDWNFMNRQACGT 106
L + +EKFDGTN F W+ ++ D L+++ + L KP+D E+WN ++RQA G
Sbjct: 3 LEEGKVTIEKFDGTN-FSFWKMQIDDYLYQKKLYQPLSGVKPEDMKQEEWNLLDRQALGM 61
Query: 105 IRLCLAKDQKYFVMKETMATSPWKKL 28
IRL LAK+ + ++ E K L
Sbjct: 62 IRLTLAKNVAFNIVNEKTTAGLMKAL 87
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 62.0 bits (149), Expect = 9e-07
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -3
Query: 273 ARFEVEKFDGTNNFGMWQCEVLDLLFREGSHIAL-DAKPKDFSYEDWNFMNRQACGTIRL 97
++FEV KFDGT NF +WQ + DLL ++G AL + P+ W M QA TIRL
Sbjct: 7 SKFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRL 66
Query: 96 CLAKDQKYFVMKETMATSPWKKL 28
L+ Y VM E W KL
Sbjct: 67 SLSDSVMYPVMDEKTPKEIWDKL 89