BLASTX nr result

ID: Cornus23_contig00015442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00015442
         (291 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78987.1| hypothetical protein (mitochondrion) [Vicia faba]       66   1e-08
ref|YP_004222366.1| hypothetical protein BevumaM_p133 [Beta vulg...    65   2e-08
gb|KJB06854.1| hypothetical protein B456_001G165200 [Gossypium r...    64   3e-08
ref|XP_003606050.1| proton-translocating NADH-quinone oxidoreduc...    59   1e-06
ref|XP_003621691.1| proton-translocating NADH-quinone oxidoreduc...    59   1e-06
ref|YP_003587708.1| hypothetical protein AnmaCp062 [Anomochloa m...    57   7e-06
ref|YP_008080557.1| ORF82 (chloroplast) [Pharus latifolius] gi|5...    57   7e-06

>gb|AGC78987.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 115

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 5/40 (12%)
 Frame = +3

Query: 30  GRTTGIEPARGGFTIHCLDPLGYIRPY-----TIYITNDS 134
           GRTTGIEPARGGFTIHCLDPLGYIRPY     ++Y+ +DS
Sbjct: 75  GRTTGIEPARGGFTIHCLDPLGYIRPYPRTGFSLYLRSDS 114


>ref|YP_004222366.1| hypothetical protein BevumaM_p133 [Beta vulgaris subsp. maritima]
           gi|346683239|ref|YP_004842171.1| hypothetical protein
           BemaM_p127 [Beta macrocarpa]
           gi|317905598|emb|CBX33217.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439881|emb|CBX33312.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148035|emb|CBJ20699.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500157|emb|CBX24976.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977917|emb|CBL54141.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 125

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 5/43 (11%)
 Frame = +3

Query: 30  GRTTGIEPARGGFTIHCLDPLGYIRPY-----TIYITNDSIST 143
           GRTTGIEPARGGFTIHCLDPLGYIRPY     ++Y+ +D   T
Sbjct: 25  GRTTGIEPARGGFTIHCLDPLGYIRPYPRTGLSLYLRSDPFRT 67


>gb|KJB06854.1| hypothetical protein B456_001G165200 [Gossypium raimondii]
          Length = 70

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%), Gaps = 5/39 (12%)
 Frame = +3

Query: 30  GRTTGIEPARGGFTIHCLDPLGYIRPY-----TIYITND 131
           GRTTGIEPARGGFTIHCLDPLGYIRPY     ++Y+ +D
Sbjct: 30  GRTTGIEPARGGFTIHCLDPLGYIRPYPHTGLSLYLRSD 68


>ref|XP_003606050.1| proton-translocating NADH-quinone oxidoreductase, protein [Medicago
           truncatula] gi|355507105|gb|AES88247.1|
           proton-translocating NADH-quinone oxidoreductase,
           protein [Medicago truncatula]
          Length = 786

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +3

Query: 27  YGRTTGIEPARGGFTIHCLDPLGYIRPYTIYITNDSISTIHHYIFLISFM 176
           +GR TGIEPA GGFTIHCLDPLGYIRP         ++ I  Y F +SF+
Sbjct: 733 HGRMTGIEPAHGGFTIHCLDPLGYIRPIL------CLNYITFYTFSLSFI 776


>ref|XP_003621691.1| proton-translocating NADH-quinone oxidoreductase, protein [Medicago
           truncatula] gi|355496706|gb|AES77909.1|
           proton-translocating NADH-quinone oxidoreductase,
           protein [Medicago truncatula]
          Length = 811

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +3

Query: 27  YGRTTGIEPARGGFTIHCLDPLGYIRPYTIYITNDSISTIHHYIFLISFM 176
           +GR TGIEPA GGFTIHCLDPLGYIRP         ++ I  Y F +SF+
Sbjct: 758 HGRMTGIEPAHGGFTIHCLDPLGYIRPIL------CLNYITFYTFSLSFI 801


>ref|YP_003587708.1| hypothetical protein AnmaCp062 [Anomochloa marantoidea]
           gi|251765292|gb|ACT15446.1| hypothetical protein
           AnmaCp062 [Anomochloa marantoidea]
          Length = 82

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = +1

Query: 19  HDIMGERRELNPRVVDSQSTALIHLATSAP 108
           +++MGERRELNPR+VDSQSTALIHLATSAP
Sbjct: 10  NNVMGERRELNPRMVDSQSTALIHLATSAP 39


>ref|YP_008080557.1| ORF82 (chloroplast) [Pharus latifolius]
           gi|570700353|ref|YP_008994015.1| orf82 (chloroplast)
           [Pharus lappulaceus] gi|570700375|ref|YP_008994037.1|
           orf82 (chloroplast) [Pharus lappulaceus]
           gi|336280856|gb|AEI29144.1| ORF82 (chloroplast) [Pharus
           latifolius] gi|449020297|gb|AGE65794.1| orf82
           (chloroplast) [Pharus lappulaceus]
           gi|449020319|gb|AGE65816.1| orf82 (chloroplast) [Pharus
           lappulaceus]
          Length = 82

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = +1

Query: 19  HDIMGERRELNPRVVDSQSTALIHLATSAP 108
           +++MGERRELNPR+VDSQSTALIHLATSAP
Sbjct: 10  NNVMGERRELNPRMVDSQSTALIHLATSAP 39


Top