BLASTX nr result
ID: Cornus23_contig00015359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00015359
(1189 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 156 6e-94
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 156 1e-93
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 154 8e-93
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 154 4e-91
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme... 147 5e-91
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 147 5e-91
ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 152 1e-89
ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 152 1e-89
ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polyme... 154 1e-89
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 154 8e-89
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 153 1e-88
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 153 1e-88
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 151 2e-88
emb|CDP05599.1| unnamed protein product [Coffea canephora] 154 1e-87
ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polyme... 150 2e-87
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun... 148 3e-87
ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polyme... 152 4e-87
ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [G... 151 5e-87
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 133 5e-87
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos... 150 4e-86
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 156 bits (395), Expect(5) = 6e-94
Identities = 71/108 (65%), Positives = 89/108 (82%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDY+P P + H+VTIEEV++ FTNYIV+D+LG IANAHT FAD
Sbjct: 822 VCWDPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFAD 881
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
+E +KAMSEPC+++A+ FSIAVDFPKTGVPAEI +LR YPDFMEK
Sbjct: 882 KESLKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEK 929
Score = 97.1 bits (240), Expect(5) = 6e-94
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
PS+ES+ VIGKLFREVKDI TS+ + FT +VA YDPD+EVDGFEDYIDDAF KS
Sbjct: 933 PSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSN 992
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 993 YDYKLGNLM 1001
Score = 77.0 bits (188), Expect(5) = 6e-94
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQ-MSSLQDNFSYGLNL 206
VTYH +WGCYNEG N D LSFPWC+YDKL+ IKK+ + R S+ + S++ FS GL+L
Sbjct: 1072 VTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQFSRGLHL 1131
Query: 205 S 203
S
Sbjct: 1132 S 1132
Score = 66.6 bits (161), Expect(5) = 6e-94
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 12/68 (17%)
Frame = -3
Query: 551 YGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVECVN 408
YGIKTE E+L + ++MSK K RDA AVRSLRKEAR+WFN + + V+
Sbjct: 1004 YGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVD 1063
Query: 407 AKASAWYH 384
AKASAWYH
Sbjct: 1064 AKASAWYH 1071
Score = 40.0 bits (92), Expect(5) = 6e-94
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPN+CSGSDLDG++YFV
Sbjct: 804 RPHPNQCSGSDLDGDIYFV 822
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 156 bits (395), Expect(5) = 1e-93
Identities = 71/108 (65%), Positives = 89/108 (82%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDY+P P + H+VTIEEV++ FTNYIV+D+LG IANAHT FAD
Sbjct: 822 VCWDPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFAD 881
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
+E +KAMSEPC+++A+ FSIAVDFPKTGVPAEI +LR YPDFMEK
Sbjct: 882 KESLKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEK 929
Score = 97.1 bits (240), Expect(5) = 1e-93
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
PS+ES+ VIGKLFREVKDI TS+ + FT +VA YDPD+EVDGFEDYIDDAF KS
Sbjct: 933 PSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSN 992
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 993 YDYKLGNLM 1001
Score = 77.0 bits (188), Expect(5) = 1e-93
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQ-MSSLQDNFSYGLNL 206
VTYH +WGCYNEG N D LSFPWC+YDKL+ IKK+ + R S+ + S++ FS GL+L
Sbjct: 1072 VTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQFSRGLHL 1131
Query: 205 S 203
S
Sbjct: 1132 S 1132
Score = 66.6 bits (161), Expect(5) = 1e-93
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 12/68 (17%)
Frame = -3
Query: 551 YGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVECVN 408
YGIKTE E+L + ++MSK K RDA AVRSLRKEAR+WFN + + V+
Sbjct: 1004 YGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVD 1063
Query: 407 AKASAWYH 384
AKASAWYH
Sbjct: 1064 AKASAWYH 1071
Score = 38.9 bits (89), Expect(5) = 1e-93
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HP ECSGSDLDG++YFV
Sbjct: 804 RPHPKECSGSDLDGDIYFV 822
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 154 bits (389), Expect(5) = 8e-93
Identities = 70/108 (64%), Positives = 88/108 (81%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDY+P P + H+VTIEEV++ FTNYIV+D+LG IANAHT AD
Sbjct: 822 VCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHAD 881
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
+E +KAMSEPC+++A+ FSIAVDFPKTGVPAEI +LR YPDFMEK
Sbjct: 882 KESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEK 929
Score = 97.1 bits (240), Expect(5) = 8e-93
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
PS+ES+ VIGKLFREVKDI TS+ + FT +VA YDPD+EVDGFEDYIDDAF KS
Sbjct: 933 PSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSN 992
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 993 YDYKLGNLM 1001
Score = 75.5 bits (184), Expect(5) = 8e-93
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSS--NRTSQMSSLQDNFSYGLN 209
VTYH +WGCYNEG N D LSFPWCVYDKL+ IK+ S+ R+ + S++ FS GL+
Sbjct: 1072 VTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLH 1131
Query: 208 LS 203
LS
Sbjct: 1132 LS 1133
Score = 65.5 bits (158), Expect(5) = 8e-93
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 12/68 (17%)
Frame = -3
Query: 551 YGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVECVN 408
YGIKTE E+L + ++MSK K RDA AVRSL+KEAR+WFN + + V+
Sbjct: 1004 YGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVD 1063
Query: 407 AKASAWYH 384
AKASAWYH
Sbjct: 1064 AKASAWYH 1071
Score = 41.2 bits (95), Expect(5) = 8e-93
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 804 RPHPNECSGSDLDGDIYFV 822
>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
Length = 1096
Score = 154 bits (388), Expect(5) = 4e-91
Identities = 71/108 (65%), Positives = 88/108 (81%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI ++ PMDY+P P + H+VTI+EV++ FTNYI++D+LG I+NAHTVFAD
Sbjct: 790 VCWDPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVEEYFTNYILNDSLGIISNAHTVFAD 849
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS+PC+++A FSIAVDFPKTGVPAEI HLR YPDFMEK
Sbjct: 850 REPAKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEK 897
Score = 95.5 bits (236), Expect(5) = 4e-91
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFR V+DI HTS+ K FT EVA YDPD+EVDGFEDYIDDAF K+
Sbjct: 901 PTYESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTN 960
Query: 585 YDFKLRN 565
YD+KL N
Sbjct: 961 YDYKLGN 967
Score = 72.0 bits (175), Expect(5) = 4e-91
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLN 209
VTYH +WGCYNEG N D LSFPWCVYDKL+ IK+ + R +S L+ F GL+
Sbjct: 1040 VTYHPSYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRKR---RCQNLSLLERQFGLGLH 1094
Score = 65.1 bits (157), Expect(5) = 4e-91
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWF-------NTNVEC 414
D YGI+TE EILG +I++MSK K RDA AVRSLRKEAR+WF ++ +
Sbjct: 970 DYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDD 1029
Query: 413 VNAKASAWYH 384
V AKASAWY+
Sbjct: 1030 VYAKASAWYY 1039
Score = 41.2 bits (95), Expect(5) = 4e-91
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 772 RPHPNECSGSDLDGDIYFV 790
>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 147 bits (370), Expect(5) = 5e-91
Identities = 70/109 (64%), Positives = 86/109 (78%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWD DLI ++ PMDY+P+P H+V IEEV++ FTNYIV+D+LG IANAHTVFAD
Sbjct: 812 VCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFAD 871
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEKS 764
+E KA +PC ++AKLFSIAVDFPKTGVPAEI +LR YPDFMEK+
Sbjct: 872 KEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKA 920
Score = 93.6 bits (231), Expect(5) = 5e-91
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFREVKDI H + FT++VA SYDPD+EV GFEDY+ DAF KS
Sbjct: 923 PTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSE 982
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 983 YDYKLGNLM 991
Score = 78.2 bits (191), Expect(5) = 5e-91
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLNL 206
VTYH +WGCYNEG + D LSFPWCVYDKL+ K+ K S R+ +SSL+ S GL L
Sbjct: 1062 VTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 1120
Score = 67.4 bits (163), Expect(5) = 5e-91
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVEC 414
D YGIKTE EIL +I++MSK ++ +DA AV+SLRKEARTWFN + +
Sbjct: 992 DYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADD 1051
Query: 413 VNAKASAWYH 384
V AKASAWYH
Sbjct: 1052 VYAKASAWYH 1061
Score = 41.2 bits (95), Expect(5) = 5e-91
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 794 RPHPNECSGSDLDGDIYFV 812
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 147 bits (370), Expect(5) = 5e-91
Identities = 70/109 (64%), Positives = 86/109 (78%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWD DLI ++ PMDY+P+P H+V IEEV++ FTNYIV+D+LG IANAHTVFAD
Sbjct: 610 VCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFAD 669
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEKS 764
+E KA +PC ++AKLFSIAVDFPKTGVPAEI +LR YPDFMEK+
Sbjct: 670 KEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKA 718
Score = 93.6 bits (231), Expect(5) = 5e-91
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFREVKDI H + FT++VA SYDPD+EV GFEDY+ DAF KS
Sbjct: 721 PTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSE 780
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 781 YDYKLGNLM 789
Score = 78.2 bits (191), Expect(5) = 5e-91
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLNL 206
VTYH +WGCYNEG + D LSFPWCVYDKL+ K+ K S R+ +SSL+ S GL L
Sbjct: 860 VTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 918
Score = 67.4 bits (163), Expect(5) = 5e-91
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVEC 414
D YGIKTE EIL +I++MSK ++ +DA AV+SLRKEARTWFN + +
Sbjct: 790 DYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADD 849
Query: 413 VNAKASAWYH 384
V AKASAWYH
Sbjct: 850 VYAKASAWYH 859
Score = 41.2 bits (95), Expect(5) = 5e-91
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 592 RPHPNECSGSDLDGDIYFV 610
>ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1150
Score = 152 bits (385), Expect(5) = 1e-89
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI ++ PMDY+P P + H+VTI+EV + FTNYI++D+LG I+NAHTVFAD
Sbjct: 844 VCWDPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFAD 903
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS+PC+++A FSIAVDFPKTGVPAEI HLR YPDFMEK
Sbjct: 904 REPAKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEK 951
Score = 96.3 bits (238), Expect(5) = 1e-89
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFR V+DI HTS+ K FT EVA YDPD+EVDGF+DYIDDAF+ KS
Sbjct: 955 PTYESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFKDYIDDAFDYKSN 1014
Query: 585 YDFKLRN 565
YD+KL N
Sbjct: 1015 YDYKLGN 1021
Score = 69.3 bits (168), Expect(5) = 1e-89
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLN 209
VTYH +WG YNEG N D LSFPWCVYDKL+ IK+ + R +SSL+ F GL+
Sbjct: 1094 VTYHPTYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR---RCQPLSSLERQFGLGLH 1148
Score = 63.2 bits (152), Expect(5) = 1e-89
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFNTN-------VEC 414
D YGI+TE EILG +I++MSK K RDA AV SL KEAR+WFN N +
Sbjct: 1024 DYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVSSLIKEARSWFNENGSGLDSEEDD 1083
Query: 413 VNAKASAWYH 384
V AKASAWY+
Sbjct: 1084 VYAKASAWYY 1093
Score = 41.2 bits (95), Expect(5) = 1e-89
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 826 RPHPNECSGSDLDGDIYFV 844
>ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596581|ref|XP_012072328.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1126
Score = 152 bits (385), Expect(5) = 1e-89
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI ++ PMDY+P P + H+VTI+EV + FTNYI++D+LG I+NAHTVFAD
Sbjct: 820 VCWDPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFAD 879
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS+PC+++A FSIAVDFPKTGVPAEI HLR YPDFMEK
Sbjct: 880 REPAKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEK 927
Score = 96.3 bits (238), Expect(5) = 1e-89
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFR V+DI HTS+ K FT EVA YDPD+EVDGF+DYIDDAF+ KS
Sbjct: 931 PTYESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFKDYIDDAFDYKSN 990
Query: 585 YDFKLRN 565
YD+KL N
Sbjct: 991 YDYKLGN 997
Score = 69.3 bits (168), Expect(5) = 1e-89
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLN 209
VTYH +WG YNEG N D LSFPWCVYDKL+ IK+ + R +SSL+ F GL+
Sbjct: 1070 VTYHPTYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR---RCQPLSSLERQFGLGLH 1124
Score = 63.2 bits (152), Expect(5) = 1e-89
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFNTN-------VEC 414
D YGI+TE EILG +I++MSK K RDA AV SL KEAR+WFN N +
Sbjct: 1000 DYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVSSLIKEARSWFNENGSGLDSEEDD 1059
Query: 413 VNAKASAWYH 384
V AKASAWY+
Sbjct: 1060 VYAKASAWYY 1069
Score = 41.2 bits (95), Expect(5) = 1e-89
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 802 RPHPNECSGSDLDGDIYFV 820
>ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
guttatus] gi|848895047|ref|XP_012847563.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Erythranthe
guttatus] gi|604316686|gb|EYU28878.1| hypothetical
protein MIMGU_mgv1a000505mg [Erythranthe guttata]
Length = 1110
Score = 154 bits (389), Expect(5) = 1e-89
Identities = 72/108 (66%), Positives = 88/108 (81%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWD DLI +V PMDY+P+P H+VTIEEV+ FTNYIV+D+LG IANAHTVFAD
Sbjct: 808 VCWDSDLIPTKQVEPMDYNPAPTTRLDHDVTIEEVEDYFTNYIVNDSLGIIANAHTVFAD 867
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
+E + A+SEPC+++A+LFSIAVDF KTG+PAEI PHLR YPDFMEK
Sbjct: 868 KEPLMALSEPCLELARLFSIAVDFNKTGIPAEIPPHLRVKEYPDFMEK 915
Score = 92.0 bits (227), Expect(5) = 1e-89
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = -2
Query: 762 SFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSMY 583
++ S VIGKLFREVKDI TS+F+ FTKEVA SYDPD+EVDGFED+ID+AF K+ Y
Sbjct: 920 NYASSRVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHIDEAFLHKTEY 979
Query: 582 DFKLRNLI 559
D+KL NL+
Sbjct: 980 DYKLGNLM 987
Score = 73.6 bits (179), Expect(5) = 1e-89
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFS 221
VTYH ++GCYNEG D LSFPWCVYDKLV IKKD +S R SQM+SL+ F+
Sbjct: 1053 VTYHPDYFGCYNEGMKRDHYLSFPWCVYDKLVKIKKD-NSRRASQMASLRRQFN 1105
Score = 61.6 bits (148), Expect(5) = 1e-89
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
Frame = -3
Query: 551 YGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWF--NTNVECVNAKASA 393
YG+KTE E+L I++MSK ++ +DA AVRSLR EAR+WF T + V AKASA
Sbjct: 990 YGVKTEAEVLSGGIMKMSKTFDRRKDAEAIGAAVRSLRNEARSWFKKGTEADDVYAKASA 1049
Query: 392 WYH 384
WY+
Sbjct: 1050 WYY 1052
Score = 41.2 bits (95), Expect(5) = 1e-89
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 790 RPHPNECSGSDLDGDIYFV 808
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 154 bits (388), Expect(5) = 8e-89
Identities = 75/108 (69%), Positives = 86/108 (79%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDYSP+P +HEVTIEEV++ FTNYIV+D+LG IANAHTVFAD
Sbjct: 800 VCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFAD 859
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS C +AKLFSIAVDFPKTGVPAEI LR YPDFMEK
Sbjct: 860 REPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEK 907
Score = 80.5 bits (197), Expect(5) = 8e-89
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P+++S VIGKLFREVKD+ + + T+E YDPD+EVDG+EDY+DDAF KS
Sbjct: 911 PTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYVDDAFYHKSN 970
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 971 YDYKLGNLM 979
Score = 79.3 bits (194), Expect(5) = 8e-89
Identities = 35/59 (59%), Positives = 43/59 (72%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLNL 206
VTYH +WG YNEG N + LSFPWCVYDKL+ IKK +S R S++SSL+ F+ GL L
Sbjct: 1050 VTYHPSYWGLYNEGMNRNHFLSFPWCVYDKLILIKKKVTSRRNSRLSSLESLFARGLRL 1108
Score = 65.1 bits (157), Expect(5) = 8e-89
Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 12/68 (17%)
Frame = -3
Query: 551 YGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVECVN 408
YGIKTE EIL I++MS+ K RDA AVRSLRKEAR+WFN + + +
Sbjct: 982 YGIKTEAEILSGGIMKMSRSFTKQRDAEAIGVAVRSLRKEARSWFNEKGNGLDSEADDLY 1041
Query: 407 AKASAWYH 384
AKASAWYH
Sbjct: 1042 AKASAWYH 1049
Score = 41.2 bits (95), Expect(5) = 8e-89
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 782 RPHPNECSGSDLDGDIYFV 800
>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 153 bits (386), Expect(5) = 1e-88
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI ++ PMDY+P P + H+VTI+EV + FTNYI++D+LG I+NAHTVFAD
Sbjct: 838 VCWDPDLIPRQQLPPMDYTPQPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFAD 897
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS+PC+++A FSIAVDFPKTGVPAEI HLR YPDFMEK
Sbjct: 898 REPEKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEK 945
Score = 95.5 bits (236), Expect(5) = 1e-88
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFR V+DI HTS+ K FT EVA YDPD+EVDGFEDYIDDAF K+
Sbjct: 949 PTYESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTN 1008
Query: 585 YDFKLRN 565
YD+KL N
Sbjct: 1009 YDYKLGN 1015
Score = 66.2 bits (160), Expect(5) = 1e-88
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGL 212
VTYH +WG YNEG N D LSFPWCVYDKL+ IK+ + R +SSL+ F L
Sbjct: 1088 VTYHPSYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR---RCQHLSSLERQFGLRL 1141
Score = 63.2 bits (152), Expect(5) = 1e-88
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWF-------NTNVEC 414
D YGI+TE EILG +I++MSK K RDA AVRSLRKEAR+WF ++ +
Sbjct: 1018 DYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDD 1077
Query: 413 VNAKASAWYH 384
V AKASAW++
Sbjct: 1078 VYAKASAWHY 1087
Score = 41.2 bits (95), Expect(5) = 1e-88
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 820 RPHPNECSGSDLDGDIYFV 838
>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1127
Score = 153 bits (386), Expect(5) = 1e-88
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI ++ PMDY+P P + H+VTI+EV + FTNYI++D+LG I+NAHTVFAD
Sbjct: 821 VCWDPDLIPRQQLPPMDYTPQPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFAD 880
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS+PC+++A FSIAVDFPKTGVPAEI HLR YPDFMEK
Sbjct: 881 REPEKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEK 928
Score = 95.5 bits (236), Expect(5) = 1e-88
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFR V+DI HTS+ K FT EVA YDPD+EVDGFEDYIDDAF K+
Sbjct: 932 PTYESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTN 991
Query: 585 YDFKLRN 565
YD+KL N
Sbjct: 992 YDYKLGN 998
Score = 66.2 bits (160), Expect(5) = 1e-88
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGL 212
VTYH +WG YNEG N D LSFPWCVYDKL+ IK+ + R +SSL+ F L
Sbjct: 1071 VTYHPSYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR---RCQHLSSLERQFGLRL 1124
Score = 63.2 bits (152), Expect(5) = 1e-88
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWF-------NTNVEC 414
D YGI+TE EILG +I++MSK K RDA AVRSLRKEAR+WF ++ +
Sbjct: 1001 DYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDD 1060
Query: 413 VNAKASAWYH 384
V AKASAW++
Sbjct: 1061 VYAKASAWHY 1070
Score = 41.2 bits (95), Expect(5) = 1e-88
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 803 RPHPNECSGSDLDGDIYFV 821
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 151 bits (382), Expect(5) = 2e-88
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDYSP+ HEVTIEE+++ FTNYIV+D+LG I+NAHT FAD
Sbjct: 800 VCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFAD 859
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS PC+++AKLFSIAVDFPKTGVPAEI LR YPDFMEK
Sbjct: 860 REPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEK 907
Score = 84.7 bits (208), Expect(5) = 2e-88
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
PS++S VIGKLFREVK++ + + K+ T+E YDPD+EV+GFEDYIDDAF KS
Sbjct: 911 PSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSK 970
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 971 YDYKLGNLM 979
Score = 75.5 bits (184), Expect(5) = 2e-88
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTS-QMSSLQDNFSYGLNL 206
VTYH +WG YNEG N D LSFPWCVYDKL+ IKK+K++ R + +SSL+ F GL+L
Sbjct: 1050 VTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHL 1109
Score = 65.9 bits (159), Expect(5) = 2e-88
Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVEC 414
D YG+KTE EILG I++MS+ K RDA AVRSLRKEAR+WFN ++
Sbjct: 980 DYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDD 1039
Query: 413 VNAKASAWYH 384
AKASAWY+
Sbjct: 1040 AYAKASAWYY 1049
Score = 40.8 bits (94), Expect(5) = 2e-88
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 782 RPHPNECSGSDLDGDVYFV 800
>emb|CDP05599.1| unnamed protein product [Coffea canephora]
Length = 1113
Score = 154 bits (388), Expect(5) = 1e-87
Identities = 73/109 (66%), Positives = 90/109 (82%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI + PMDY+P+P M H+VTIEEV++ FT+YIV+++LG IANAHTVFAD
Sbjct: 809 VCWDPDLIPPRQDRPMDYTPAPTMQLDHKVTIEEVEEYFTDYIVNNSLGIIANAHTVFAD 868
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEKS 764
RE +KA SEPC+++A+L SIAVDFPKTGVPAEI HLR +PDFMEKS
Sbjct: 869 REPLKARSEPCLELAELHSIAVDFPKTGVPAEIPSHLRVKEFPDFMEKS 917
Score = 87.4 bits (215), Expect(5) = 1e-87
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P ++SQ VIGKLFREVK TS+ K FTK+VA SYD D+EVDGFEDYI +AF+ KS
Sbjct: 920 PMYDSQRVIGKLFREVKGKAPLTSSIKSFTKQVARKSYDSDMEVDGFEDYIAEAFDYKSE 979
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 980 YDYKLGNLM 988
Score = 71.6 bits (174), Expect(5) = 1e-87
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGL 212
VTYH +WGCYN+G N +SFPWCVYDKL+ IKK S R+ Q+S L+ FS+GL
Sbjct: 1055 VTYHPKYWGCYNKGLNRAHYISFPWCVYDKLIQIKK-ASIRRSQQISLLELQFSHGL 1110
Score = 63.2 bits (152), Expect(5) = 1e-87
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 8/66 (12%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFNTNVECVN---AK 402
D YGI+TE EIL I++MS+ ++ DA A+ SLRKEA+TWFNTN + AK
Sbjct: 989 DYYGIETEAEILSGGIMKMSRSFDRRNDAEAVGRAMTSLRKEAKTWFNTNGDHFGDACAK 1048
Query: 401 ASAWYH 384
ASAWYH
Sbjct: 1049 ASAWYH 1054
Score = 40.0 bits (92), Expect(5) = 1e-87
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG+ YFV
Sbjct: 791 RPHPNECSGSDLDGDTYFV 809
>ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
Length = 1123
Score = 150 bits (378), Expect(5) = 2e-87
Identities = 70/108 (64%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWD +LI ++ PMDY+P+P + H+VTIEEV++ F NY+V+D+LG IANAHT FAD
Sbjct: 813 VCWDDELIPSGQIQPMDYTPAPPIELDHDVTIEEVEEYFVNYMVNDSLGIIANAHTAFAD 872
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS+PCI++AKLFSIAVDFPKTGVPA I HLR +PDFMEK
Sbjct: 873 REPSKAMSKPCIELAKLFSIAVDFPKTGVPAIIPQHLRVKEFPDFMEK 920
Score = 79.7 bits (195), Expect(5) = 2e-87
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P+++S VIG+LFREVKD+ H + + F++EVA SYD D+EVDGFEDYI+DA KS
Sbjct: 924 PTYQSCNVIGELFREVKDVEPHGGSIRSFSREVARQSYDHDMEVDGFEDYIEDALYYKSN 983
Query: 585 YDFKLRNLI 559
YD L NL+
Sbjct: 984 YDSILGNLL 992
Score = 77.4 bits (189), Expect(5) = 2e-87
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSS-NRTSQMSSLQDNFSYGLNL 206
VTYH ++GCYNEG N D +SFPWCVYDKLV IKK+K+S R +SSL+ F GL+L
Sbjct: 1063 VTYHPKYFGCYNEGLNRDHFISFPWCVYDKLVHIKKEKASVRRALNLSSLESRFRNGLHL 1122
Query: 205 S 203
+
Sbjct: 1123 N 1123
Score = 67.0 bits (162), Expect(5) = 2e-87
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRD-----AAVRSLRKEARTWF-------NTNVEC 414
D YGIKTE EIL ++++MSK K RD AVRSLRK+ARTWF N+ +
Sbjct: 993 DYYGIKTEAEILSGSVMKMSKSFTKKRDMDPINMAVRSLRKDARTWFNEKATGLNSGADD 1052
Query: 413 VNAKASAWYH 384
V AKASAWYH
Sbjct: 1053 VYAKASAWYH 1062
Score = 41.2 bits (95), Expect(5) = 2e-87
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 795 RPHPNECSGSDLDGDIYFV 813
>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
gi|462422197|gb|EMJ26460.1| hypothetical protein
PRUPE_ppa001524mg [Prunus persica]
Length = 808
Score = 148 bits (374), Expect(5) = 3e-87
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWD +LI ++ PMDY+P+P ++ H VTIEEV++ F NY+V+D+LG IANAHT FAD
Sbjct: 498 VCWDDELIPSRQIQPMDYTPAPTIALDHAVTIEEVEEYFVNYMVNDSLGIIANAHTAFAD 557
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
R+ KAMS+PCI++AKLFSIAVDFPKTGVPA I HLR +PDFMEK
Sbjct: 558 RQPSKAMSKPCIELAKLFSIAVDFPKTGVPAIIPQHLRVKEFPDFMEK 605
Score = 82.4 bits (202), Expect(5) = 3e-87
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P+++S VIG+LFREVKD+ H + + F++EVA SYD D+EVDGFEDYI+DAF KS
Sbjct: 609 PTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDRDMEVDGFEDYIEDAFYYKSN 668
Query: 585 YDFKLRNLI 559
YD L NL+
Sbjct: 669 YDSILGNLL 677
Score = 74.3 bits (181), Expect(5) = 3e-87
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSS-NRTSQMSSLQDNFSYGLNL 206
VTYH ++GCYNEG N D +SFPWCVYDKLV IKK+K+S R +SSL+ F L+L
Sbjct: 748 VTYHPKYFGCYNEGLNRDHFISFPWCVYDKLVHIKKEKASVRRARNLSSLERRFRNDLHL 807
Query: 205 S 203
+
Sbjct: 808 N 808
Score = 68.2 bits (165), Expect(5) = 3e-87
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRD-----AAVRSLRKEARTWFN-------TNVEC 414
D YGIKTE EIL ++++MSK K RD AVRSLRKEARTWFN + +
Sbjct: 678 DYYGIKTEAEILSGSVMKMSKSFTKRRDIDPINMAVRSLRKEARTWFNEKATGLDSGADD 737
Query: 413 VNAKASAWYH 384
V AKASAWYH
Sbjct: 738 VYAKASAWYH 747
Score = 41.2 bits (95), Expect(5) = 3e-87
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 480 RPHPNECSGSDLDGDIYFV 498
>ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058682|ref|XP_011075688.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058684|ref|XP_011075689.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
Length = 1115
Score = 152 bits (384), Expect(5) = 4e-87
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDPDLI +V PMDY P+P H+VTIEEV++ FTNYIV+D+LG I+NAHTVFAD
Sbjct: 812 VCWDPDLIPPRQVSPMDYDPAPTTGLDHDVTIEEVEEYFTNYIVNDSLGIISNAHTVFAD 871
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
+E A+SE C+++A+LFSIAVDFPKTGVPAEI HLR YPDFM+K
Sbjct: 872 KEESMALSESCLELARLFSIAVDFPKTGVPAEIPSHLRVKEYPDFMDK 919
Score = 95.9 bits (237), Expect(5) = 4e-87
Identities = 45/68 (66%), Positives = 58/68 (85%)
Frame = -2
Query: 762 SFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSMY 583
++ES+ VIGKL+REVKDI HT++ K FTKEVA SYDPD+EVDGF+DYID+AF+ K+ Y
Sbjct: 924 AYESKRVIGKLYREVKDIAPHTTSSKSFTKEVARRSYDPDMEVDGFKDYIDEAFDYKTEY 983
Query: 582 DFKLRNLI 559
D+KL NL+
Sbjct: 984 DYKLGNLM 991
Score = 65.1 bits (157), Expect(5) = 4e-87
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQ 233
VTYH FWG YNEG D +SFPWCVYDKL+ IK+D +S R +SSL+
Sbjct: 1057 VTYHPDFWGSYNEGLKRDHYISFPWCVYDKLIKIKED-NSRRAPGISSLE 1105
Score = 59.7 bits (143), Expect(5) = 4e-87
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Frame = -3
Query: 551 YGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFNTNVECVN--AKASA 393
YGIKTE EIL I++ SK ++ +DA AVRSLR EAR+WF E + AKASA
Sbjct: 994 YGIKTEAEILSGGIMKTSKTFDRRKDAEAIGVAVRSLRNEARSWFKKGSESDDPYAKASA 1053
Query: 392 WYH 384
WYH
Sbjct: 1054 WYH 1056
Score = 41.2 bits (95), Expect(5) = 4e-87
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 794 RPHPNECSGSDLDGDIYFV 812
>ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [Gossypium raimondii]
gi|763812161|gb|KJB79013.1| hypothetical protein
B456_013G029000 [Gossypium raimondii]
Length = 1110
Score = 151 bits (381), Expect(5) = 5e-87
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDYSP+P HEVTIEE+++ FTNYIV+D+LG I+NAHT FAD
Sbjct: 800 VCWDPELIPYKQMDPMDYSPAPTTILDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFAD 859
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAM PC+++AKLFSIAVDFPKTGVPAEI LR YPDFMEK
Sbjct: 860 REPGKAMCHPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEK 907
Score = 84.7 bits (208), Expect(5) = 5e-87
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
PS++S VIGKLFREVK++ + + K+ T+E YDPD+EV+GFEDYIDDAF KS
Sbjct: 911 PSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSK 970
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 971 YDYKLGNLM 979
Score = 72.4 bits (176), Expect(5) = 5e-87
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTS-QMSSLQDNFSYGLNL 206
VTYH +WG YNEG N D LSFPWCVYDKL+ IKK+K++ R + +SSL+ F L+L
Sbjct: 1050 VTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRRLHL 1109
Score = 64.3 bits (155), Expect(5) = 5e-87
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVEC 414
D YG+KTE EIL IL+MS+ K RDA AVRSLRKEAR+WFN ++
Sbjct: 980 DYYGVKTEAEILSGGILKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEERSELDEEIDD 1039
Query: 413 VNAKASAWYH 384
AKASAWY+
Sbjct: 1040 AYAKASAWYY 1049
Score = 41.2 bits (95), Expect(5) = 5e-87
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 782 RPHPNECSGSDLDGDIYFV 800
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 133 bits (335), Expect(5) = 5e-87
Identities = 66/109 (60%), Positives = 82/109 (75%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWD DLI ++ PMDY+P+P +EV++ FTNYIV+D+LG IANAHTVFAD
Sbjct: 354 VCWDRDLIPPQQINPMDYTPAPT---------KEVEEYFTNYIVNDSLGIIANAHTVFAD 404
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEKS 764
+E KA +PC ++AKLFSIAVDFPKTGVPAEI +LR YPDFMEK+
Sbjct: 405 KEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKA 453
Score = 93.6 bits (231), Expect(5) = 5e-87
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
P++ESQ VIGKLFREVKDI H + FT++VA SYDPD+EV GFEDY+ DAF KS
Sbjct: 456 PTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSE 515
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 516 YDYKLGNLM 524
Score = 78.2 bits (191), Expect(5) = 5e-87
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTSQMSSLQDNFSYGLNL 206
VTYH +WGCYNEG + D LSFPWCVYDKL+ K+ K S R+ +SSL+ S GL L
Sbjct: 595 VTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 653
Score = 67.4 bits (163), Expect(5) = 5e-87
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 12/70 (17%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVEC 414
D YGIKTE EIL +I++MSK ++ +DA AV+SLRKEARTWFN + +
Sbjct: 525 DYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADD 584
Query: 413 VNAKASAWYH 384
V AKASAWYH
Sbjct: 585 VYAKASAWYH 594
Score = 41.2 bits (95), Expect(5) = 5e-87
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 336 RPHPNECSGSDLDGDIYFV 354
>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
1 -like protein [Gossypium arboreum]
Length = 1110
Score = 150 bits (378), Expect(5) = 4e-86
Identities = 71/108 (65%), Positives = 86/108 (79%)
Frame = -1
Query: 1090 LCWDPDLILGDEVLPMDYSPSPCMSQKHEVTIEEVQKIFTNYIVDDTLGTIANAHTVFAD 911
+CWDP+LI ++ PMDYSP+ HEVTIEE+++ FTNYIV+D+LG I+NAHT FAD
Sbjct: 800 VCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFAD 859
Query: 910 RELMKAMSEPCIQVAKLFSIAVDFPKTGVPAEILPHLRPSVYPDFMEK 767
RE KAMS PC+++AKLFSIAVDFPKTGVPAEI LR +PDFMEK
Sbjct: 860 REPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEFPDFMEK 907
Score = 83.2 bits (204), Expect(5) = 4e-86
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = -2
Query: 765 PSFESQCVIGKLFREVKDIVLHTSTFKYFTKEVAASSYDPDVEVDGFEDYIDDAFNCKSM 586
PS++S VIGKLFREVK++ + + K T+E YDPD+EV+GFEDYIDDAF KS
Sbjct: 911 PSYQSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEVEGFEDYIDDAFFYKSK 970
Query: 585 YDFKLRNLI 559
YD+KL NL+
Sbjct: 971 YDYKLGNLM 979
Score = 72.8 bits (177), Expect(5) = 4e-86
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -1
Query: 382 VTYHSYFWGCYNEGRNGDDLLSFPWCVYDKLVCIKKDKSSNRTS-QMSSLQDNFSYGLNL 206
VTYH +WG YNEG N D LSFPWCVYDKL+ IKK+K++ R + +SSL+ F G +L
Sbjct: 1050 VTYHHSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAALREALDLSSLEHCFQRGFHL 1109
Score = 63.9 bits (154), Expect(5) = 4e-86
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 17/77 (22%)
Frame = -3
Query: 557 DDYGIKTEGEILGDNILQMSKYCNKGRDA-----AVRSLRKEARTWFN-------TNVEC 414
D YG+KTE EIL I++MS+ K RDA AVRSLRKEAR+WFN ++
Sbjct: 980 DYYGVKTEAEILSGGIMKMSRSFTKKRDAEVISMAVRSLRKEARSWFNEKGSELDEEIDD 1039
Query: 413 VNAKASAWY-----HSY 378
AKASAWY HSY
Sbjct: 1040 AYAKASAWYYVTYHHSY 1056
Score = 40.8 bits (94), Expect(5) = 4e-86
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 1140 RSHPNECSGSDLDGNLYFV 1084
R HPNECSGSDLDG++YFV
Sbjct: 782 RPHPNECSGSDLDGDVYFV 800