BLASTX nr result
ID: Cornus23_contig00015324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00015324
(902 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274855.1| PREDICTED: DNA-directed RNA polymerases IV a... 260 1e-66
ref|XP_010646234.1| PREDICTED: DNA-directed RNA polymerases IV a... 258 6e-66
ref|XP_009617770.1| PREDICTED: DNA-directed RNA polymerases IV a... 253 1e-64
ref|XP_009782113.1| PREDICTED: DNA-directed RNA polymerases IV a... 253 2e-64
ref|XP_008224649.1| PREDICTED: DNA-directed RNA polymerases IV a... 253 2e-64
ref|XP_006350243.1| PREDICTED: DNA-directed RNA polymerases IV a... 253 2e-64
ref|XP_007211940.1| hypothetical protein PRUPE_ppa010773mg [Prun... 253 2e-64
ref|XP_009356429.1| PREDICTED: DNA-directed RNA polymerases IV a... 252 3e-64
ref|XP_008384212.1| PREDICTED: DNA-directed RNA polymerases IV a... 249 2e-63
ref|XP_007211941.1| hypothetical protein PRUPE_ppa010773mg [Prun... 247 1e-62
ref|XP_009374823.1| PREDICTED: DNA-directed RNA polymerases IV a... 246 1e-62
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm... 243 1e-61
ref|XP_006467223.1| PREDICTED: DNA-directed RNA polymerases IV a... 243 2e-61
ref|XP_009355015.1| PREDICTED: DNA-directed RNA polymerases IV a... 241 5e-61
ref|XP_006449991.1| hypothetical protein CICLE_v10016499mg [Citr... 241 7e-61
ref|XP_007026413.1| DNA-directed RNA polymerase II subunit rpb4,... 240 1e-60
ref|XP_004236644.1| PREDICTED: DNA-directed RNA polymerases IV a... 238 6e-60
ref|XP_010688795.1| PREDICTED: DNA-directed RNA polymerases IV a... 236 2e-59
ref|XP_012451830.1| PREDICTED: DNA-directed RNA polymerases IV a... 234 7e-59
ref|XP_006467222.1| PREDICTED: DNA-directed RNA polymerases IV a... 234 9e-59
>ref|XP_002274855.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Vitis vinifera] gi|731438230|ref|XP_010646233.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 isoform X1 [Vitis vinifera]
gi|297736694|emb|CBI25730.3| unnamed protein product
[Vitis vinifera]
Length = 239
Score = 260 bits (664), Expect = 1e-66
Identities = 145/238 (60%), Positives = 175/238 (73%), Gaps = 11/238 (4%)
Frame = -3
Query: 732 MAEKGGNGFKG----GKTALKSP--ASLKGKDDSSAKSKRGRKVKFDS---EEAKTNTPS 580
M EKGG GF GK++ KSP ASL GKDDS+AKSKRGRKV+F++ EA+ +
Sbjct: 1 MGEKGGKGFSLNSNLGKSSTKSPLEASLTGKDDSAAKSKRGRKVQFNNGGLPEARLTSSL 60
Query: 579 NIGGKFDFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAA 400
GGK D P + +NG KS V K P+PLELRIEQELPKN KC+MDCEAA
Sbjct: 61 MSGGKTDIPIAKGDLSKGGKGGRVLNGEKSAVPKPPAPLELRIEQELPKNAKCMMDCEAA 120
Query: 399 HILQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGE 220
IL+GIQEQMV+LSEDPTIK+PL+F+KGLQYA+S++ Y +PQSVR VLE L K+GVSDGE
Sbjct: 121 LILKGIQEQMVVLSEDPTIKIPLSFNKGLQYAQSSNCYASPQSVRLVLEPLSKYGVSDGE 180
Query: 219 MCMIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST*S--P*RDPCF 52
+C+IANTCPE++DEVFALVPSLK K S L+EP+K+ L LA+LK S S P R P F
Sbjct: 181 ICVIANTCPETIDEVFALVPSLKPKWSTLREPLKDVLRGLAELKHSNQSSNPERSPGF 238
>ref|XP_010646234.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X2 [Vitis vinifera]
Length = 235
Score = 258 bits (658), Expect = 6e-66
Identities = 143/236 (60%), Positives = 174/236 (73%), Gaps = 9/236 (3%)
Frame = -3
Query: 732 MAEKGGNGFKG----GKTALKSPASLKGKDDSSAKSKRGRKVKFDS---EEAKTNTPSNI 574
M EKGG GF GK++ KSP L+GKDDS+AKSKRGRKV+F++ EA+ +
Sbjct: 1 MGEKGGKGFSLNSNLGKSSTKSP--LEGKDDSAAKSKRGRKVQFNNGGLPEARLTSSLMS 58
Query: 573 GGKFDFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHI 394
GGK D P + +NG KS V K P+PLELRIEQELPKN KC+MDCEAA I
Sbjct: 59 GGKTDIPIAKGDLSKGGKGGRVLNGEKSAVPKPPAPLELRIEQELPKNAKCMMDCEAALI 118
Query: 393 LQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMC 214
L+GIQEQMV+LSEDPTIK+PL+F+KGLQYA+S++ Y +PQSVR VLE L K+GVSDGE+C
Sbjct: 119 LKGIQEQMVVLSEDPTIKIPLSFNKGLQYAQSSNCYASPQSVRLVLEPLSKYGVSDGEIC 178
Query: 213 MIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST*S--P*RDPCF 52
+IANTCPE++DEVFALVPSLK K S L+EP+K+ L LA+LK S S P R P F
Sbjct: 179 VIANTCPETIDEVFALVPSLKPKWSTLREPLKDVLRGLAELKHSNQSSNPERSPGF 234
>ref|XP_009617770.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
[Nicotiana tomentosiformis]
gi|697127450|ref|XP_009617771.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 4 [Nicotiana
tomentosiformis]
Length = 220
Score = 253 bits (646), Expect = 1e-64
Identities = 136/218 (62%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Frame = -3
Query: 732 MAEKGGNGF---KGGKTALKSPASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKF 562
MAEKGG GF K GK+ALKSPAS KGKDD SAKSKRGRKV+FDSE + + GK
Sbjct: 1 MAEKGGKGFSLPKNGKSALKSPAS-KGKDDISAKSKRGRKVQFDSEGSLDTNFTKSNGKA 59
Query: 561 DFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGI 382
D P+ K + GKS K P PLELR+EQELP N CLMDCEAA ILQGI
Sbjct: 60 DQPSSKGVSGKGGKGEKAGSAGKSQTAKAPGPLELRVEQELPDNTACLMDCEAADILQGI 119
Query: 381 QEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIAN 202
QEQMV+LSEDP IKLP++FD+GL YA+ Y P+ V+Q+L+ LK+HGVSDGE+CMIAN
Sbjct: 120 QEQMVVLSEDPAIKLPISFDRGLTYAQRNRLYDNPEIVKQILKPLKEHGVSDGELCMIAN 179
Query: 201 TCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLK 88
ESVDEVFALVPS K K+SKL+ P+KN L ELAKL+
Sbjct: 180 FAVESVDEVFALVPSFKTKKSKLRIPLKNVLGELAKLR 217
>ref|XP_009782113.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
[Nicotiana sylvestris] gi|698462995|ref|XP_009782115.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Nicotiana sylvestris]
Length = 220
Score = 253 bits (645), Expect = 2e-64
Identities = 135/218 (61%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Frame = -3
Query: 732 MAEKGGNGF---KGGKTALKSPASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKF 562
MAEKGG GF K GK+ALKSPAS KGKDD SAKSKRGRKV+FD E + + GK
Sbjct: 1 MAEKGGKGFSLPKNGKSALKSPAS-KGKDDISAKSKRGRKVQFDPEGSLDTNLTKSNGKA 59
Query: 561 DFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGI 382
D P+ K +G KS K P PLELR+EQELP N CLMDCEAA ILQGI
Sbjct: 60 DQPSSKGVSGKGGKGEKVGSGSKSQTAKAPGPLELRVEQELPDNTTCLMDCEAADILQGI 119
Query: 381 QEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIAN 202
QEQMV+LSEDP IKLP+AFD+GL YA+ Y P++V+Q+L+ LK+HGVSDGE+CMIAN
Sbjct: 120 QEQMVVLSEDPAIKLPIAFDRGLTYAQRNRLYDNPETVKQILKPLKEHGVSDGELCMIAN 179
Query: 201 TCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLK 88
ESVDEVFALVPS K K+SKL+ P++N L ELAKL+
Sbjct: 180 FAVESVDEVFALVPSFKTKKSKLRVPLENVLGELAKLR 217
>ref|XP_008224649.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Prunus
mume] gi|645236259|ref|XP_008224650.1| PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4 [Prunus
mume]
Length = 226
Score = 253 bits (645), Expect = 2e-64
Identities = 142/233 (60%), Positives = 164/233 (70%), Gaps = 15/233 (6%)
Frame = -3
Query: 732 MAEKGGNGF-----KGGKTALKSP-----ASLKGKDDSSAKSKRGRKVKFDSEEAKTNTP 583
M+EKGG GF K K++LKS ASLKGKDDSS KSK+GRKV+FDSE
Sbjct: 1 MSEKGGKGFSLPTGKAVKSSLKSTPSTKDASLKGKDDSSTKSKKGRKVQFDSEGLH-EPK 59
Query: 582 SNIGGKFDFPNPXXXXXXXXXXXKTMNGGKSPVT-----KEPSPLELRIEQELPKNVKCL 418
SN KFD P GGK KEP PLEL+IEQELP++ KCL
Sbjct: 60 SNFSSKFDNPAAASGKADWG------KGGKGDKVGNGRKKEPQPLELKIEQELPQSAKCL 113
Query: 417 MDCEAAHILQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKH 238
MDCEAA ILQGIQEQM++LS+DPTIK+P++FDKGLQYA+ TSHYT PQSVR+VLETL K+
Sbjct: 114 MDCEAADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSHYTNPQSVRKVLETLTKY 173
Query: 237 GVSDGEMCMIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
GVSDGE+ +IAN CPE+ DEVFALVPSLK RS L +P+K LSEL KLK ST
Sbjct: 174 GVSDGEISVIANVCPETTDEVFALVPSLKTTRSVLSQPLKEVLSELTKLKQST 226
>ref|XP_006350243.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Solanum tuberosum]
Length = 220
Score = 253 bits (645), Expect = 2e-64
Identities = 135/218 (61%), Positives = 159/218 (72%), Gaps = 3/218 (1%)
Frame = -3
Query: 732 MAEKGGNGF---KGGKTALKSPASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKF 562
MAEKGG GF K GK+ALKSPAS KGKDDSS KSKRGRKV+FDSE + + GK
Sbjct: 1 MAEKGGKGFSLPKSGKSALKSPAS-KGKDDSSVKSKRGRKVQFDSEGSLDTNSTKSNGKA 59
Query: 561 DFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGI 382
D P+ K + GKS K P PLELR+EQELP N CLMDCEAA ILQGI
Sbjct: 60 DIPSLKGDLGKAGKGEKAGSAGKSQKAKAPDPLELRVEQELPANSTCLMDCEAADILQGI 119
Query: 381 QEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIAN 202
QE MV+LS+DP IKLP++FD+GL YA+ Y PQ+V+Q+LE LK+HGVSDGE+CMIAN
Sbjct: 120 QENMVVLSDDPAIKLPVSFDRGLAYAQRNRLYDNPQAVKQILEPLKQHGVSDGELCMIAN 179
Query: 201 TCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLK 88
ESVDEVFALVPS K K+SKL+ P++N L+ELAKL+
Sbjct: 180 FPLESVDEVFALVPSFKNKKSKLRVPLENVLAELAKLR 217
>ref|XP_007211940.1| hypothetical protein PRUPE_ppa010773mg [Prunus persica]
gi|462407805|gb|EMJ13139.1| hypothetical protein
PRUPE_ppa010773mg [Prunus persica]
Length = 225
Score = 253 bits (645), Expect = 2e-64
Identities = 142/230 (61%), Positives = 164/230 (71%), Gaps = 12/230 (5%)
Frame = -3
Query: 732 MAEKGGNGF-----KGGKTALKSP-----ASLKGKDDSSAKSKRGRKVKFDSEEAKTNTP 583
M+EKGG GF K K++LKS ASLKGKDDSS KSK+GRKV+FDSE
Sbjct: 1 MSEKGGKGFSLPTGKAVKSSLKSTPSTKDASLKGKDDSSTKSKKGRKVQFDSEGLH-EPK 59
Query: 582 SNIGGKFDFPNPXXXXXXXXXXXKTM--NGGKSPVTKEPSPLELRIEQELPKNVKCLMDC 409
SN KFD P NG K KEP PLEL+IEQELP++ KCLMDC
Sbjct: 60 SNFSSKFDNPAAASGKDWGKGGKGDKVGNGRK----KEPQPLELKIEQELPQSAKCLMDC 115
Query: 408 EAAHILQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVS 229
EAA ILQGIQEQM++LS+DPTIK+P++FDKGLQYA+ TSHYT PQSVR+VLETL K+GVS
Sbjct: 116 EAADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSHYTNPQSVRKVLETLTKYGVS 175
Query: 228 DGEMCMIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
DGE+ +IAN CPE+ DEVFALVPSLK RS L +P+K LSEL KLK ST
Sbjct: 176 DGEISVIANVCPETTDEVFALVPSLKTTRSVLSQPLKEVLSELTKLKQST 225
>ref|XP_009356429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X2 [Pyrus x bretschneideri]
Length = 218
Score = 252 bits (643), Expect = 3e-64
Identities = 137/225 (60%), Positives = 162/225 (72%), Gaps = 7/225 (3%)
Frame = -3
Query: 732 MAEKGGNGFKGGKTALKS--PASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKFD 559
M+EKGG GF K +LKS P+S GKDDSS KSK+GR+V+FDSE ++ SN KF
Sbjct: 1 MSEKGGKGFSLPKPSLKSTPPSSKDGKDDSSTKSKKGRRVQFDSEGSR-EPKSNFSSKFY 59
Query: 558 FPNPXXXXXXXXXXXKTMNGGKSPVT-----KEPSPLELRIEQELPKNVKCLMDCEAAHI 394
P GGK KEP PLEL+IEQELPK+VKC+MDCEAA I
Sbjct: 60 RPAAASGKADWG------KGGKGDTVANAKKKEPQPLELKIEQELPKSVKCMMDCEAADI 113
Query: 393 LQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMC 214
LQGIQEQMV+LS+DPTIK+P++FDKGLQYA STS YT PQS R VLETLKK+GV DGE+C
Sbjct: 114 LQGIQEQMVMLSKDPTIKIPVSFDKGLQYANSTSRYTHPQSGRHVLETLKKYGVKDGEIC 173
Query: 213 MIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
+IAN CPE+ DEVFALVPSLK KRS L +P+K+ LSEL + K +T
Sbjct: 174 VIANVCPETTDEVFALVPSLKAKRSTLSQPLKDVLSELTRFKRAT 218
>ref|XP_008384212.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Malus
domestica] gi|657984249|ref|XP_008384213.1| PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4 [Malus
domestica]
Length = 218
Score = 249 bits (636), Expect = 2e-63
Identities = 132/222 (59%), Positives = 165/222 (74%), Gaps = 4/222 (1%)
Frame = -3
Query: 732 MAEKGGNGFKGGKTALKS--PASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKFD 559
M+EKGG GF K++LKS P++ GKDDSS KSK+GR+V+FDSE ++ S+ KFD
Sbjct: 1 MSEKGGKGFSLPKSSLKSTPPSTKDGKDDSSTKSKKGRRVQFDSEGSR-EPKSHFSSKFD 59
Query: 558 FPNPXXXXXXXXXXXK--TMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQG 385
+ K T+ G+ KEP PLEL+IEQELPK+ KC+MDCEAA ILQG
Sbjct: 60 SRSAASGKADWGKGGKGDTIGNGRK---KEPQPLELKIEQELPKSAKCMMDCEAADILQG 116
Query: 384 IQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIA 205
IQEQMV+LS+DPTIK+P++FDKGLQYA S+S YT PQS R +LETLKK+GV DGE+C+IA
Sbjct: 117 IQEQMVMLSKDPTIKIPVSFDKGLQYANSSSRYTHPQSARHILETLKKYGVKDGEICVIA 176
Query: 204 NTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
N CPE+ DEVFALVPSLK KRS L +P+K+ LSEL + K +T
Sbjct: 177 NVCPETTDEVFALVPSLKAKRSTLSQPLKDVLSELTRFKKAT 218
>ref|XP_007211941.1| hypothetical protein PRUPE_ppa010773mg [Prunus persica]
gi|462407806|gb|EMJ13140.1| hypothetical protein
PRUPE_ppa010773mg [Prunus persica]
Length = 237
Score = 247 bits (630), Expect = 1e-62
Identities = 141/242 (58%), Positives = 164/242 (67%), Gaps = 24/242 (9%)
Frame = -3
Query: 732 MAEKGGNGF-----KGGKTALKSP-----------------ASLKGKDDSSAKSKRGRKV 619
M+EKGG GF K K++LKS +SLKGKDDSS KSK+GRKV
Sbjct: 1 MSEKGGKGFSLPTGKAVKSSLKSTPSTKDGLLFLRSLLFLTSSLKGKDDSSTKSKKGRKV 60
Query: 618 KFDSEEAKTNTPSNIGGKFDFPNPXXXXXXXXXXXKTM--NGGKSPVTKEPSPLELRIEQ 445
+FDSE SN KFD P NG K KEP PLEL+IEQ
Sbjct: 61 QFDSEGLH-EPKSNFSSKFDNPAAASGKDWGKGGKGDKVGNGRK----KEPQPLELKIEQ 115
Query: 444 ELPKNVKCLMDCEAAHILQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVR 265
ELP++ KCLMDCEAA ILQGIQEQM++LS+DPTIK+P++FDKGLQYA+ TSHYT PQSVR
Sbjct: 116 ELPQSAKCLMDCEAADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSHYTNPQSVR 175
Query: 264 QVLETLKKHGVSDGEMCMIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKD 85
+VLETL K+GVSDGE+ +IAN CPE+ DEVFALVPSLK RS L +P+K LSEL KLK
Sbjct: 176 KVLETLTKYGVSDGEISVIANVCPETTDEVFALVPSLKTTRSVLSQPLKEVLSELTKLKQ 235
Query: 84 ST 79
ST
Sbjct: 236 ST 237
>ref|XP_009374823.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Pyrus x
bretschneideri] gi|694399392|ref|XP_009374824.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Pyrus x bretschneideri]
gi|694399394|ref|XP_009374825.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 4 [Pyrus x
bretschneideri]
Length = 218
Score = 246 bits (629), Expect = 1e-62
Identities = 131/222 (59%), Positives = 163/222 (73%), Gaps = 4/222 (1%)
Frame = -3
Query: 732 MAEKGGNGFKGGKTALKS--PASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKFD 559
M+EKGG GF K++LKS P + GKDDSS KSK+GR+V+FDSE ++ S+ KFD
Sbjct: 1 MSEKGGKGFSLPKSSLKSTPPTTKDGKDDSSTKSKKGRRVQFDSEGSR-EPKSHFSSKFD 59
Query: 558 FPNPXXXXXXXXXXXK--TMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQG 385
+ K T+ G+ KEP PLEL+IEQELPK+ KC+MDCEAA ILQG
Sbjct: 60 SRSAASGKADWGKGGKGDTIGNGRK---KEPQPLELKIEQELPKSAKCMMDCEAADILQG 116
Query: 384 IQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIA 205
IQEQMV+LS+DPTIK+P++FDKGLQYA S+S Y PQS R +LETLKK+GV DGE+C+IA
Sbjct: 117 IQEQMVMLSKDPTIKIPVSFDKGLQYANSSSRYIHPQSARHILETLKKYGVKDGEICVIA 176
Query: 204 NTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
N CPE+ DEVFALVPSLK KRS L +P+K+ LSEL + K +T
Sbjct: 177 NVCPETTDEVFALVPSLKAKRSTLSQPLKDVLSELTRFKKAT 218
>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
gi|223535695|gb|EEF37360.1| conserved hypothetical
protein [Ricinus communis]
Length = 203
Score = 243 bits (620), Expect = 1e-61
Identities = 131/219 (59%), Positives = 163/219 (74%), Gaps = 6/219 (2%)
Frame = -3
Query: 726 EKGGNGF----KGGKTALKS--PASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGK 565
EKGG GF KG K++LKS PAS KGKDD+SAKSKRG+KV+F+S+ + GGK
Sbjct: 2 EKGGKGFSLPGKGLKSSLKSITPASTKGKDDTSAKSKRGKKVQFNSQGNMSK-----GGK 56
Query: 564 FDFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQG 385
D K NG K TKEP PLEL+IEQ+LPKN KCLMDCEAA +LQG
Sbjct: 57 GD---------------KVSNGVKISSTKEPQPLELKIEQDLPKNAKCLMDCEAAQVLQG 101
Query: 384 IQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIA 205
IQEQMV+LS DPTIKLP++FD+ LQ+AR+ + +T PQSVR++LE LKKHGVS+GE+C IA
Sbjct: 102 IQEQMVLLSRDPTIKLPVSFDRALQHARTGARFTNPQSVRRILEGLKKHGVSEGEICTIA 161
Query: 204 NTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLK 88
N CP+ VDEVFALVPSLK K++ L+EP+K+ L +L++LK
Sbjct: 162 NVCPDGVDEVFALVPSLKSKKNVLREPLKDILGQLSELK 200
>ref|XP_006467223.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X2 [Citrus sinensis] gi|641859965|gb|KDO78655.1|
hypothetical protein CISIN_1g027312mg [Citrus sinensis]
Length = 225
Score = 243 bits (619), Expect = 2e-61
Identities = 126/218 (57%), Positives = 159/218 (72%), Gaps = 4/218 (1%)
Frame = -3
Query: 723 KGGNGFKGGKTALKS-PASLKGKDDSSAKSKRGRKVKFDSE---EAKTNTPSNIGGKFDF 556
KGG GGKT+LKS PASL GKDD+SAKSKRGRKV+F++E E K S GKF+
Sbjct: 8 KGGGVGGGGKTSLKSIPASLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKFET 67
Query: 555 PNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGIQE 376
K NG K V KE PLELR+EQELPKN KCLMDCEAAHIL+GIQE
Sbjct: 68 TYGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGIQE 127
Query: 375 QMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIANTC 196
QM +LS DPTIK+P++FDKGL YA++ SH+T PQ+V+ + ++L +HGV+DGE+C+IAN C
Sbjct: 128 QMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIANIC 187
Query: 195 PESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDS 82
PE+V+E +A+VPSLK KRS+L + +K L +LAK K +
Sbjct: 188 PETVEEAYAIVPSLKAKRSRLNDLLKEVLIQLAKFKST 225
>ref|XP_009355015.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X1 [Pyrus x bretschneideri]
gi|694308917|ref|XP_009355700.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 4-like isoform X1
[Pyrus x bretschneideri]
Length = 235
Score = 241 bits (615), Expect = 5e-61
Identities = 137/242 (56%), Positives = 162/242 (66%), Gaps = 24/242 (9%)
Frame = -3
Query: 732 MAEKGGNGFKGGKTALKS--PASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKFD 559
M+EKGG GF K +LKS P+S GKDDSS KSK+GR+V+FDSE ++ SN KF
Sbjct: 1 MSEKGGKGFSLPKPSLKSTPPSSKDGKDDSSTKSKKGRRVQFDSEGSR-EPKSNFSSKFY 59
Query: 558 FPNPXXXXXXXXXXXKTMNGGKSPVT-----KEPSPLELRIEQELPKNVKCLMDCEAAHI 394
P GGK KEP PLEL+IEQELPK+VKC+MDCEAA I
Sbjct: 60 RPAAASGKADWG------KGGKGDTVANAKKKEPQPLELKIEQELPKSVKCMMDCEAADI 113
Query: 393 LQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMC 214
LQGIQEQMV+LS+DPTIK+P++FDKGLQYA STS YT PQS R VLETLKK+GV DGE+C
Sbjct: 114 LQGIQEQMVMLSKDPTIKIPVSFDKGLQYANSTSRYTHPQSGRHVLETLKKYGVKDGEIC 173
Query: 213 MIANTCPESVDEVFALVPSLK-----------------GKRSKLKEPVKNALSELAKLKD 85
+IAN CPE+ DEVFALVPSLK KRS L +P+K+ LSEL + K
Sbjct: 174 VIANVCPETTDEVFALVPSLKTVYLYLCFKNAFPKLFGAKRSTLSQPLKDVLSELTRFKR 233
Query: 84 ST 79
+T
Sbjct: 234 AT 235
>ref|XP_006449991.1| hypothetical protein CICLE_v10016499mg [Citrus clementina]
gi|557552602|gb|ESR63231.1| hypothetical protein
CICLE_v10016499mg [Citrus clementina]
Length = 225
Score = 241 bits (614), Expect = 7e-61
Identities = 125/218 (57%), Positives = 158/218 (72%), Gaps = 4/218 (1%)
Frame = -3
Query: 723 KGGNGFKGGKTALKS-PASLKGKDDSSAKSKRGRKVKFDSE---EAKTNTPSNIGGKFDF 556
KGG GGKT+LKS P SL GKDD+SAKSKRGRKV+F++E E K S GKF+
Sbjct: 8 KGGGVGGGGKTSLKSIPTSLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKFET 67
Query: 555 PNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGIQE 376
K NG K V KE PLELR+EQELPKN KCLMDCEAAHIL+GIQE
Sbjct: 68 TCGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGIQE 127
Query: 375 QMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIANTC 196
QM +LS DPTIK+P++FDKGL YA++ SH+T PQ+V+ + ++L +HGV+DGE+C+IAN C
Sbjct: 128 QMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIANIC 187
Query: 195 PESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDS 82
PE+V+E +A+VPSLK KRS+L + +K L +LAK K +
Sbjct: 188 PETVEEAYAIVPSLKAKRSRLNDLLKEVLIQLAKFKST 225
>ref|XP_007026413.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 1
[Theobroma cacao] gi|590627315|ref|XP_007026414.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao] gi|508781779|gb|EOY29035.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao] gi|508781780|gb|EOY29036.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao]
Length = 231
Score = 240 bits (612), Expect = 1e-60
Identities = 137/232 (59%), Positives = 166/232 (71%), Gaps = 14/232 (6%)
Frame = -3
Query: 732 MAEKGGNGFK-----GGKTALKS-PASLK---GKDDSSAKSKRGRKVKFDSEEAKT---- 592
M+EKGG GF K+ALKS PAS GKDD+SAKSKRGRKV+F E
Sbjct: 1 MSEKGGKGFSLPTKTTPKSALKSTPASATARHGKDDNSAKSKRGRKVQFGMEGLPNLGFN 60
Query: 591 -NTPSNIGGKFDFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLM 415
++P + GKF P K +NGGK+PV KE LELR+EQELP+NVKCLM
Sbjct: 61 FSSPKS-DGKFAIPVGKGDWAKGGKGEKVVNGGKAPVAKEAKSLELRVEQELPENVKCLM 119
Query: 414 DCEAAHILQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHG 235
DCEAA+IL+GIQEQMV+LS+D TIKLP +F GLQYA++ S+YT PQSVR+VLE L K+G
Sbjct: 120 DCEAANILEGIQEQMVMLSQDSTIKLPESFHLGLQYAKTRSYYTNPQSVRRVLEALSKYG 179
Query: 234 VSDGEMCMIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
VS E+C+IANTCPE+VDEVFALV SL+ K+S+L EP+K+ L EL KLK ST
Sbjct: 180 VSYSEICVIANTCPETVDEVFALVRSLEAKKSRLSEPLKDVLDELGKLKKST 231
>ref|XP_004236644.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Solanum
lycopersicum]
Length = 220
Score = 238 bits (606), Expect = 6e-60
Identities = 127/218 (58%), Positives = 153/218 (70%), Gaps = 3/218 (1%)
Frame = -3
Query: 732 MAEKGGNGF---KGGKTALKSPASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKF 562
MAEKGG GF K GK++LKSPAS KGKDDSSAKSKRGRKV+FDSE + + GK
Sbjct: 1 MAEKGGKGFSLPKSGKSSLKSPAS-KGKDDSSAKSKRGRKVQFDSEGSLDTNSTKSNGKA 59
Query: 561 DFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGI 382
D P+ K + GKS K P PLELR+EQEL C+MDCEAA ILQGI
Sbjct: 60 DIPSFKGDLGKAGKGEKAGSAGKSQKAKAPDPLELRVEQELSTKTTCMMDCEAADILQGI 119
Query: 381 QEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIAN 202
QE MV+LS+DP IKLP++FD+GL Y + Y PQ+V Q+L LK+HGVSDGE+CMIAN
Sbjct: 120 QENMVVLSDDPAIKLPVSFDRGLAYGQRIRLYDNPQAVEQILGPLKQHGVSDGELCMIAN 179
Query: 201 TCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLK 88
ESVDEVFA VPS K ++SKL+ P++N L+EL KL+
Sbjct: 180 FPLESVDEVFAFVPSFKNRKSKLRVPLENVLAELTKLR 217
>ref|XP_010688795.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X2 [Beta vulgaris subsp. vulgaris]
gi|870850591|gb|KMT02691.1| hypothetical protein
BVRB_9g203680 [Beta vulgaris subsp. vulgaris]
Length = 205
Score = 236 bits (601), Expect = 2e-59
Identities = 125/218 (57%), Positives = 153/218 (70%)
Frame = -3
Query: 732 MAEKGGNGFKGGKTALKSPASLKGKDDSSAKSKRGRKVKFDSEEAKTNTPSNIGGKFDFP 553
MAEKGG GF GK LKGKDD S KSK+GRKV F+ EEA N S GGK +
Sbjct: 1 MAEKGGKGFSVGKGV-----PLKGKDDDSTKSKKGRKVHFNDEEAPANVSSKSGGKGETL 55
Query: 552 NPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGIQEQ 373
N GGKS KE + EL ++ ELPKN +C+MDCEAA ILQGIQEQ
Sbjct: 56 NGG-------------KGGKSSAGKETTKYELNVQAELPKNSRCVMDCEAADILQGIQEQ 102
Query: 372 MVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIANTCP 193
MV LS DPTIKLP++FD+GL YA++ Y+ P++VR+VLETLKK+GVSDGE+C+IAN+CP
Sbjct: 103 MVFLSRDPTIKLPVSFDRGLLYAKAGGRYSDPKAVRKVLETLKKYGVSDGEICVIANSCP 162
Query: 192 ESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
E+ +E FALVPSLK KRSK+ E +++ LS+L KLK ST
Sbjct: 163 ENAEEAFALVPSLKAKRSKINERLEDVLSQLVKLKLST 200
>ref|XP_012451830.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
[Gossypium raimondii] gi|823238363|ref|XP_012451831.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Gossypium raimondii] gi|823238365|ref|XP_012451832.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Gossypium raimondii] gi|823238367|ref|XP_012451833.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Gossypium raimondii] gi|823238369|ref|XP_012451834.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Gossypium raimondii] gi|763800475|gb|KJB67430.1|
hypothetical protein B456_010G190700 [Gossypium
raimondii] gi|763800476|gb|KJB67431.1| hypothetical
protein B456_010G190700 [Gossypium raimondii]
gi|763800477|gb|KJB67432.1| hypothetical protein
B456_010G190700 [Gossypium raimondii]
gi|763800478|gb|KJB67433.1| hypothetical protein
B456_010G190700 [Gossypium raimondii]
gi|763800479|gb|KJB67434.1| hypothetical protein
B456_010G190700 [Gossypium raimondii]
gi|763800480|gb|KJB67435.1| hypothetical protein
B456_010G190700 [Gossypium raimondii]
gi|763800481|gb|KJB67436.1| hypothetical protein
B456_010G190700 [Gossypium raimondii]
Length = 217
Score = 234 bits (597), Expect = 7e-59
Identities = 134/226 (59%), Positives = 164/226 (72%), Gaps = 8/226 (3%)
Frame = -3
Query: 732 MAEKGGNGFK-----GGKTALKSPASLKGKDDSSAKSKRGRKVKFDSE---EAKTNTPSN 577
M+EKGG F K++LKS A GKDD+SAKSKRGRKV+F +E + ++P +
Sbjct: 1 MSEKGGRMFSLPTKTTPKSSLKSTA---GKDDNSAKSKRGRKVQFGTEGSPDVNFSSPKS 57
Query: 576 IGGKFDFPNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAH 397
GKF P K NGGK+ V KE LELR+EQELP+NVKCLMDCEAA
Sbjct: 58 -DGKFATP-----FGKGGKGEKAANGGKTHVAKESQSLELRVEQELPENVKCLMDCEAAS 111
Query: 396 ILQGIQEQMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEM 217
IL+GIQ+QMVILS DPTIKLP +F GLQYA++ S+YT PQSVR+VL++L K+GVS+ E+
Sbjct: 112 ILEGIQDQMVILSSDPTIKLPESFGSGLQYAKTGSYYTNPQSVRKVLQSLTKYGVSNSEI 171
Query: 216 CMIANTCPESVDEVFALVPSLKGKRSKLKEPVKNALSELAKLKDST 79
C+IANTCPE+VDEVFALV SL+ KRSKL P+K+ L ELAKLK ST
Sbjct: 172 CVIANTCPETVDEVFALVRSLEAKRSKLTGPLKDVLEELAKLKTST 217
>ref|XP_006467222.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X1 [Citrus sinensis]
Length = 237
Score = 234 bits (596), Expect = 9e-59
Identities = 126/230 (54%), Positives = 159/230 (69%), Gaps = 16/230 (6%)
Frame = -3
Query: 723 KGGNGFKGGKTALKS-PASLKGKDDSSAKSKRGRKVKFDSE---EAKTNTPSNIGGKFDF 556
KGG GGKT+LKS PASL GKDD+SAKSKRGRKV+F++E E K S GKF+
Sbjct: 8 KGGGVGGGGKTSLKSIPASLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKFET 67
Query: 555 PNPXXXXXXXXXXXKTMNGGKSPVTKEPSPLELRIEQELPKNVKCLMDCEAAHILQGIQE 376
K NG K V KE PLELR+EQELPKN KCLMDCEAAHIL+GIQE
Sbjct: 68 TYGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGIQE 127
Query: 375 QMVILSEDPTIKLPLAFDKGLQYARSTSHYTTPQSVRQVLETLKKHGVSDGEMCMIANTC 196
QM +LS DPTIK+P++FDKGL YA++ SH+T PQ+V+ + ++L +HGV+DGE+C+IAN C
Sbjct: 128 QMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIANIC 187
Query: 195 PESVDEVFALVPSLK------------GKRSKLKEPVKNALSELAKLKDS 82
PE+V+E +A+VPSLK KRS+L + +K L +LAK K +
Sbjct: 188 PETVEEAYAIVPSLKRMVDERICELFQAKRSRLNDLLKEVLIQLAKFKST 237