BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00015113
         (969 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   384   e-104
emb|CDP17738.1| unnamed protein product [Coffea canephora]            370   e-100
emb|CDP17739.1| unnamed protein product [Coffea canephora]            336   1e-89
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   300   9e-79
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   300   1e-78
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   299   3e-78
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   297   7e-78
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   296   2e-77
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   296   2e-77
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               295   4e-77
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                295   4e-77
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           295   5e-77
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     295   5e-77
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   294   6e-77
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   293   1e-76
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   290   2e-75
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   288   6e-75
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   288   6e-75
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   286   2e-74
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   286   2e-74

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  384 bits (985), Expect = e-104
 Identities = 191/322 (59%), Positives = 230/322 (71%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKGNLYFLDGHTVTGRVAIXXXXXXX 789
            +ISLG L+S G  VTM +G+LK   GA + +KG  K NLY+  G TV G VA        
Sbjct: 293  LISLGALESKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKK 352

Query: 788  XXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHRT 609
                  LWHMRLGHAGE               K+ KL+FCEHCVLGKQ RVKFGTAIH T
Sbjct: 353  DAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNT 412

Query: 608  KATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMIE 429
            K  L YVH+DVWGP+K  S+GG+H+FVTF++DFSR V V+TM++K++VL+I LKWK  +E
Sbjct: 413  KGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVE 472

Query: 428  TQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV* 249
              TGRKIK L++DNGGEYKSDPFL VC + GIVRHF +  TP QNGV+ERMN+TLV+KV 
Sbjct: 473  NHTGRKIKVLQTDNGGEYKSDPFLNVCQDCGIVRHFTVRKTPQQNGVSERMNKTLVEKVC 532

Query: 248  CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPAY 69
            CMLS A L + FWAEA+ YA +LVNRLP +A+DGKTP EVWSG+ A+DYD LHVF   AY
Sbjct: 533  CMLSNAELGREFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYDSLHVFGSIAY 592

Query: 68   FHVRESKLDPRVIILCFLIFYP 3
            +HV ESKLDPR     F+ F P
Sbjct: 593  YHVIESKLDPRAKKALFMGFSP 614


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  370 bits (951), Expect = e-100
 Identities = 187/321 (58%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKGNLYFLDGHTVTGRVAIXXXXXXX 789
            +ISLG+L+S G +V M +G+LKV  GA L +KG  K NLY+  G TV G  A+       
Sbjct: 378  LISLGLLESKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSK 437

Query: 788  XXXXX*-LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLG AGE               K  KL+FCEHCVL KQ +VKFGT IH 
Sbjct: 438  KDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHN 497

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK  L YVH+DVWGP+K  SLGG+++FVTFI+DFSR V V+TM+ KDE+L I LKWK  +
Sbjct: 498  TKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARV 557

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QTGRKIK LR+DNGGEYKSDPF K+C   GIVRHFI+   P QNGV+E MN+TLV+KV
Sbjct: 558  ENQTGRKIKILRTDNGGEYKSDPFQKICQECGIVRHFIVRKIPQQNGVSEHMNKTLVEKV 617

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS AGL + FWAEA+ YA +LVNRLP +A+ GKTP EVWSG+ A+DYD L +FD  A
Sbjct: 618  RCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSAIGGKTPLEVWSGKLATDYDSLRIFDSTA 677

Query: 71   YFHVRESKLDPRVIILCFLIF 9
            Y+HV ESKLDPR     F+ F
Sbjct: 678  YYHVNESKLDPRAKKALFMGF 698


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  336 bits (862), Expect = 1e-89
 Identities = 170/297 (57%), Positives = 204/297 (68%), Gaps = 1/297 (0%)
 Frame = -2

Query: 923 MENGVLKVIRGAFLAMKGTHKGNLYFLDGHTVTGRVAIXXXXXXXXXXXX*-LWHMRLGH 747
           M +G+LKV  GA + +KG  K  LY+  G  V G  A               LWHMRLGH
Sbjct: 1   MRDGILKVTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGH 60

Query: 746 AGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHRTKATLYYVHTDVWGP 567
           AGE               K  KL+FCEHCVL KQ +VKFGT IH TK  L YVH++VWGP
Sbjct: 61  AGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGP 120

Query: 566 SKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMIETQTGRKIKRLRSDN 387
           +K  SLGG+++FVTFI+DFSR V V+TM+ KDEVL+I LKWK  +E QTGRKIK LR+DN
Sbjct: 121 AKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDN 180

Query: 386 GGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV*CMLSQAGLSKAFWA 207
           GGEYKSDPF K+    GIV+HF +  TP QNGV+ERMN+TLV+KV CMLS A L + FWA
Sbjct: 181 GGEYKSDPFQKIGQECGIVQHFTVRKTPQQNGVSERMNKTLVEKVHCMLSNARLGRKFWA 240

Query: 206 EALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPAYFHVRESKLDPR 36
           E + YA +LVNRLP +A+ GKTP EVWSG+  +DYD L +F   AY+HV ESKLDPR
Sbjct: 241 ETVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDYDSLRIFYSTAYYHVNESKLDPR 297


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  300 bits (769), Expect = 9e-79
 Identities = 155/319 (48%), Positives = 193/319 (60%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKG-THKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +  +GVLKV +G+ + +KG  +   LY L G T+TG  +       
Sbjct: 360  LISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYVLRGCTLTGSDSAAAAITN 419

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH                   S K+ FCEHC+ GK  RV+F T++H 
Sbjct: 420  DEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHT 479

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK TL YVH D+WGPSK  SLGG  + +T I+D+SR V  Y ++HKD+       WK MI
Sbjct: 480  TKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMI 539

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNGGE+ S  F   C  +GIVRH  IP TP QNGVAERMNRT++ + 
Sbjct: 540  ERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRA 599

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P   L+ KTP EVWSG T +DY  L VF C A
Sbjct: 600  RCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG-TPADYSQLKVFGCTA 658

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR +   FL
Sbjct: 659  YAHVDNGKLEPRAVKCLFL 677


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  300 bits (768), Expect = 1e-78
 Identities = 155/319 (48%), Positives = 193/319 (60%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +  +GVLKV +G+ + +KG  +   LY L G T+TG  +       
Sbjct: 360  LISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTGSDSAAAAVTN 419

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH                   S K+ FCEHC+ GK  RV+F T++H 
Sbjct: 420  DEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHT 479

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK TL YVH D+WGPSK  SLGG  + +T I+D+SR V  Y ++HKD+       WK MI
Sbjct: 480  TKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMI 539

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNGGE+ S  F   C  +GIVRH  IP TP QNGVAERMNRT++ + 
Sbjct: 540  ERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRA 599

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P   L+ KTP EVWSG T +DY  L VF C A
Sbjct: 600  RCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG-TPADYSQLKVFGCTA 658

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR +   FL
Sbjct: 659  YAHVDNGKLEPRAVKCLFL 677


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  299 bits (765), Expect = 3e-78
 Identities = 155/319 (48%), Positives = 192/319 (60%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +  +GVLKV +G+ + +KG  +   LY L G T+TG  +       
Sbjct: 360  LISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTGSDSAAAAVTN 419

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH                   S K+ FCEHC+ GK  RV+F T++H 
Sbjct: 420  DEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHT 479

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK TL YVH D+WGPSK  SLGG  + +T I+D+SR V  Y ++HKD+       WK MI
Sbjct: 480  TKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMI 539

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNGGE+ S  F   C  +GIVRH  IP TP QNGVAERMNRT++ + 
Sbjct: 540  ERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRA 599

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P   L+ KTP EVWSG  A DY  L VF C A
Sbjct: 600  RCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGMPA-DYSQLKVFGCTA 658

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR +   FL
Sbjct: 659  YAHVDNGKLEPRAVKCLFL 677


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
            gi|108708632|gb|ABF96427.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1326

 Score =  297 bits (761), Expect = 7e-78
 Identities = 158/319 (49%), Positives = 193/319 (60%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +   GV+KV +G+ + M G  +  NLY L G T+ G V        
Sbjct: 362  LISLSTLDAEGYKYSSSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVSKD 421

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 GK+ FCEHCV GK  RVKF T++HR
Sbjct: 422  EPIKTN-LWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHR 480

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK  L YVHTD+WGPS+ A LGG  + +T I+D+SR V  Y ++HKD+      +WK  I
Sbjct: 481  TKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRI 540

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT +++K LR+DNGGE+ SD F   C  +GIVRH  IP TP QNGVAERMNRT++ K 
Sbjct: 541  ERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKA 600

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P   L+ KTP EVWSG  A DY  L VF C A
Sbjct: 601  RCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMPA-DYSQLRVFGCTA 659

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR I   FL
Sbjct: 660  YAHVDNGKLEPRAIKCLFL 678


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  296 bits (758), Expect = 2e-77
 Identities = 155/323 (47%), Positives = 197/323 (60%), Gaps = 1/323 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKG-NLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD  GYK +  +G+LKV +G+ + MK   K  NLY L G T+ G VA       
Sbjct: 576  LISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLS 635

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 GKL FCEHC+ GK  RVKF T+ H 
Sbjct: 636  NSDATN-LWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHT 694

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            T+  L YVH+D+WGP++  S GG  + +T ++D+SR V  Y ++HK +  D+  +WK M+
Sbjct: 695  TEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMV 754

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNG E+ S  F   C ++GIVRH+ +P TP QNGVAERMNRT++ K 
Sbjct: 755  ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKA 814

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             C+LS AGL K FWAEA+  A YL+NR P  A+D KTP EVWSG  A +Y  L VF C A
Sbjct: 815  RCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NYSDLRVFGCTA 873

Query: 71   YFHVRESKLDPRVIILCFLIFYP 3
            Y HV   KL+PR  I C  + YP
Sbjct: 874  YAHVDNGKLEPRA-IKCIFLGYP 895


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  296 bits (758), Expect = 2e-77
 Identities = 155/323 (47%), Positives = 197/323 (60%), Gaps = 1/323 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKG-NLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD  GYK +  +G+LKV +G+ + MK   K  NLY L G T+ G VA       
Sbjct: 369  LISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLS 428

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 GKL FCEHC+ GK  RVKF T+ H 
Sbjct: 429  NSDATN-LWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHT 487

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            T+  L YVH+D+WGP++  S GG  + +T ++D+SR V  Y ++HK +  D+  +WK M+
Sbjct: 488  TEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMV 547

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNG E+ S  F   C ++GIVRH+ +P TP QNGVAERMNRT++ K 
Sbjct: 548  ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKA 607

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             C+LS AGL K FWAEA+  A YL+NR P  A+D KTP EVWSG  A +Y  L VF C A
Sbjct: 608  RCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NYSDLRVFGCTA 666

Query: 71   YFHVRESKLDPRVIILCFLIFYP 3
            Y HV   KL+PR  I C  + YP
Sbjct: 667  YAHVDNGKLEPRA-IKCIFLGYP 688


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  295 bits (755), Expect = 4e-77
 Identities = 154/323 (47%), Positives = 197/323 (60%), Gaps = 1/323 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKG-NLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD  GYK +  +G+LKV +G+ + MK   K  NLY L G T+ G VA       
Sbjct: 186  LISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLS 245

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 GKL FCEHC+ GK  RVKF T+ H 
Sbjct: 246  NSDATN-LWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHT 304

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            T+  L YVH+D+WGP++  S GG  + +T +ND+SR V  Y ++HK +  ++  +WK M+
Sbjct: 305  TEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMV 364

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNG E+ S  F   C ++GI+RH+ +P TP QNGVAERMNRT++ K 
Sbjct: 365  ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKA 424

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS AGL K FWAEA+  A YL+NR P  A+D KTP +VWSG  A +Y  L VF C A
Sbjct: 425  RCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPA-NYSDLKVFGCTA 483

Query: 71   YFHVRESKLDPRVIILCFLIFYP 3
            Y HV   KL+PR  I C  + YP
Sbjct: 484  YAHVDNGKLEPRT-IKCIFLGYP 505


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  295 bits (755), Expect = 4e-77
 Identities = 154/323 (47%), Positives = 197/323 (60%), Gaps = 1/323 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKG-NLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD  GYK +  +G+LKV +G+ + MK   K  NLY L G T+ G VA       
Sbjct: 354  LISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLS 413

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 GKL FCEHC+ GK  RVKF T+ H 
Sbjct: 414  NSDATN-LWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHT 472

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            T+  L YVH+D+WGP++  S GG  + +T +ND+SR V  Y ++HK +  ++  +WK M+
Sbjct: 473  TEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMV 532

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNG E+ S  F   C ++GI+RH+ +P TP QNGVAERMNRT++ K 
Sbjct: 533  ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKA 592

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS AGL K FWAEA+  A YL+NR P  A+D KTP +VWSG  A +Y  L VF C A
Sbjct: 593  RCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPA-NYSDLKVFGCTA 651

Query: 71   YFHVRESKLDPRVIILCFLIFYP 3
            Y HV   KL+PR  I C  + YP
Sbjct: 652  YAHVDNGKLEPRT-IKCIFLGYP 673


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  295 bits (754), Expect = 5e-77
 Identities = 153/319 (47%), Positives = 191/319 (59%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +  +GVLKV +G+ + +KG  +   LY L G T+ G  +       
Sbjct: 362  LISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLPGSDSAAAAVTN 421

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH                   S K+ FCEHC+ GK  RV+F T++H 
Sbjct: 422  DEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGYTSSKIKFCEHCIFGKHKRVQFNTSVHT 481

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK TL YVH D+WGPSK  SLGG  + +T I+D+SR V  Y ++HKD+       WK MI
Sbjct: 482  TKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMI 541

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K L +DNGGE+ S  F   C  +GIVRH  IP TP QNGVAERMNRT++ + 
Sbjct: 542  ERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRA 601

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P   L+ KTP EVWSG T +DY  L VF C A
Sbjct: 602  RCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG-TPADYSQLKVFGCTA 660

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR +   FL
Sbjct: 661  YAHVDNGKLEPRAVKCLFL 679


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  295 bits (754), Expect = 5e-77
 Identities = 155/319 (48%), Positives = 194/319 (60%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHK-GNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD  GYK +  +G+LKV +G+ + MK   K  NLY L G T+ G VA       
Sbjct: 278  LISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLS 337

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 GKL FCEHC+ GK  RVKF T+ H 
Sbjct: 338  NSDATN-LWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHT 396

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            T+  L YVH+D+WGP++  S GG  + +T ++D+SR V  Y ++HK +  D+  +WK M+
Sbjct: 397  TEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMV 456

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT RK+K LR+DNG E  S  F   C ++GIVRH+ +P TP QNGVAERMNRT++ K 
Sbjct: 457  ERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKA 516

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A L K FWAEA+  A YL+NR P  A+D KTP EVWSG  A +Y  L VF C A
Sbjct: 517  RCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NYSDLRVFGCTA 575

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PRVI   FL
Sbjct: 576  YAHVDNGKLEPRVIKCIFL 594


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  294 bits (753), Expect = 6e-77
 Identities = 153/311 (49%), Positives = 198/311 (63%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKGNLYFLDGHTVTGRVAIXXXXXXX 789
            +ISL +LDS G+  + ++GVL+V +G+ L +KG  +G LYFL G TVTG   +       
Sbjct: 348  LISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQ 407

Query: 788  XXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHRT 609
                  LWH+RLGH GE               K   L+FCEHCV GK  R KF  AIHRT
Sbjct: 408  KDMTK-LWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRT 466

Query: 608  KATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMIE 429
            K TL Y+H+D WGP +  SLGG  +FV+ I+D+SR   VY M+HK E      +WK ++E
Sbjct: 467  KGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILME 526

Query: 428  TQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV* 249
             QTG+KIKRLR+DNG E+    F + C ++GI RH  +  TP QNGVAERMN+TL+++  
Sbjct: 527  NQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERAR 586

Query: 248  CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPAY 69
            CMLS AGL + FWAEA+  A YL+NR P T +  KTP E+WSG+ A+DY  L  F C AY
Sbjct: 587  CMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGK-AADYSNLKAFGCTAY 645

Query: 68   FHVRESKLDPR 36
            +HV E KL+PR
Sbjct: 646  YHVSEGKLEPR 656


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  293 bits (751), Expect = 1e-76
 Identities = 153/322 (47%), Positives = 201/322 (62%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKGNLYFLDGHTVTGRVAIXXXXXXX 789
            +ISLG+LD SGY    E   L+V RG+   MKGT K  LY L G TVTG+V+        
Sbjct: 330  LISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTVTGKVSTVLKEDVG 389

Query: 788  XXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHRT 609
                  LWH RLGH                  K   L FCEHCV GK TRVKF  AIH T
Sbjct: 390  TTK---LWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHET 446

Query: 608  KATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMIE 429
            +  L Y+H+D+WGPS+  S+GG  +F+T I+D+SR V +Y +++K E      +WK ++E
Sbjct: 447  QNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVE 506

Query: 428  TQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV* 249
            TQT RK+K+LR+DNG E+ S+ F  +C  +GI RH  +  TP QNG+AERMNRT++++V 
Sbjct: 507  TQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVR 566

Query: 248  CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPAY 69
            CMLS +GLSK FWAEA   A +L+NR P +AL  KTP+E W+G+ A+DY  L VF C AY
Sbjct: 567  CMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGK-AADYQHLKVFGCTAY 625

Query: 68   FHVRESKLDPRVIILCFLIFYP 3
             H +  KL+PR  + C  + YP
Sbjct: 626  VHTKTDKLEPRA-VKCIFLGYP 646


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  290 bits (741), Expect = 2e-75
 Identities = 154/319 (48%), Positives = 190/319 (59%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +   GV+KV +G+ + M G  +  NLY L G T+ G V        
Sbjct: 362  LISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKD 421

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 G + FCE CV GK  RVKF T++HR
Sbjct: 422  EPNKTN-LWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHR 480

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK  L YVH D+WGPS+  SLGG  + +T I+D+SR V  Y ++HKD+      +WK MI
Sbjct: 481  TKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMI 540

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT +++K LR+DN GE+ SD F   C  +GIVRH  IP TP QNGVAERMNRT++ K 
Sbjct: 541  ERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKA 600

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P   L+ KTP E+WSG  A DY  L VF C A
Sbjct: 601  RCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMPA-DYSQLRVFGCTA 659

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR I   FL
Sbjct: 660  YAHVDNEKLEPRAIKCLFL 678


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  288 bits (736), Expect = 6e-75
 Identities = 152/318 (47%), Positives = 197/318 (61%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGTHKGNLYFLDGHTVTGRVAIXXXXXXX 789
            +IS+G LD +GY  +   GVL+V +GA + MKG  +  +Y L G +V G  A+       
Sbjct: 687  LISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTLMGSSVLGTAAVEEDNCTE 746

Query: 788  XXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHRT 609
                  LWH RLGH  E               ++GKL FCE CV+GKQ RVKF    H T
Sbjct: 747  ------LWHRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTT 800

Query: 608  KATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMIE 429
               L Y+H+D+WGPS   S  G  ++VTFI+DFSR V VY ++ KDEV     +WK M+E
Sbjct: 801  NGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVE 860

Query: 428  TQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV* 249
             +TG+ +K LR+DNG E+ +  F + C  +GIVRH  +  TP QNGVAERMN+TLV +  
Sbjct: 861  KRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRAR 920

Query: 248  CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPAY 69
            CM   AGLSK FWAEA+  A+YLVNR P TA+D KTP+EVWSG+  S+Y  L +F CPAY
Sbjct: 921  CMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGK-PSNYSGLKIFGCPAY 979

Query: 68   FHVRESKLDPRVIILCFL 15
             HV + KL+PR +   FL
Sbjct: 980  AHVSDGKLEPRAMKCIFL 997


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score =  288 bits (736), Expect = 6e-75
 Identities = 152/319 (47%), Positives = 191/319 (59%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +   GV+KV +G+ + M G  +  NLY L G T+ G V        
Sbjct: 257  LISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGYVTAAVVSKD 316

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   +WHMRLGH  E                 G + FCEHCV GK  RVKF T++HR
Sbjct: 317  EPSKTN-MWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHR 375

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            TK  L YVH D+WGPS+  SLGG  + +T I+D+SR V  Y ++HKD+      +WK MI
Sbjct: 376  TKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMI 435

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            + QT +++K LR+DNGG + SD F   C  +GIV H  IP TP QNGVAERMNRT++ K 
Sbjct: 436  KRQTEKEVKVLRTDNGGGFCSDAFDDYCRKEGIVMHHTIPYTPQQNGVAERMNRTIISKA 495

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAEA   A YL+NR P  +L+ KTP EVWSG  A +Y  L VF C A
Sbjct: 496  RCMLSNARMNKRFWAEAAKTACYLINRSPSISLNKKTPIEVWSGMPA-NYSQLRVFGCTA 554

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR I   FL
Sbjct: 555  YAHVNNGKLEPRAIKCLFL 573


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1156

 Score =  286 bits (732), Expect = 2e-74
 Identities = 152/319 (47%), Positives = 190/319 (59%), Gaps = 1/319 (0%)
 Frame = -2

Query: 968  MISLGVLDSSGYKVTMENGVLKVIRGAFLAMKGT-HKGNLYFLDGHTVTGRVAIXXXXXX 792
            +ISL  LD+ GYK +   GV+KV +G+ + M G  +  NLY L G T+ G +        
Sbjct: 302  LISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSTNLYVLRGSTLHGSITAAAVSKD 361

Query: 791  XXXXXX*LWHMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHR 612
                   LWHMRLGH  E                 G + FCEHCV GK  RVKF T++HR
Sbjct: 362  EPSKTN-LWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHR 420

Query: 611  TKATLYYVHTDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMI 432
            +K  L YVH D+WGPS+  SLGG  + +T I+D+SR V  Y ++HKD+      +WK MI
Sbjct: 421  SKGILDYVHADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMI 480

Query: 431  ETQTGRKIKRLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV 252
            E QT +++K LR+D+GGE+ SD F   C  +GIVRH  IP TP QNGVAERMNRT++   
Sbjct: 481  ERQTEKEVKVLRTDSGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNT 540

Query: 251  *CMLSQAGLSKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPA 72
             CMLS A ++K FWAE    A YL+NR P   L+ KTP EVWSG  A DY  L VF C A
Sbjct: 541  RCMLSNARMNKRFWAEVANTACYLINRSPSIPLNKKTPIEVWSGMPA-DYSQLRVFGCTA 599

Query: 71   YFHVRESKLDPRVIILCFL 15
            Y HV   KL+PR I   FL
Sbjct: 600  YAHVDNGKLEPRAIKCLFL 618


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
            gi|20087076|gb|AAM10749.1|AC112514_2 Putative
            retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  286 bits (731), Expect = 2e-74
 Identities = 149/314 (47%), Positives = 192/314 (61%), Gaps = 1/314 (0%)
 Frame = -2

Query: 941  SGYKVTMENGVLKVIRGAFLAMKGTHKG-NLYFLDGHTVTGRVAIXXXXXXXXXXXX*LW 765
            +GYK +  +G+LKV +G+ + MK   K  NLY L G T+ G VA              LW
Sbjct: 339  AGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATN-LW 397

Query: 764  HMRLGHAGEXXXXXXXXXXXXXXXKSGKLDFCEHCVLGKQTRVKFGTAIHRTKATLYYVH 585
            HMRLGH  E                  KL FCEHC+ GK  RVKF T+ H T+  L YVH
Sbjct: 398  HMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 457

Query: 584  TDVWGPSKNASLGGKHWFVTFINDFSRYVLVYTMRHKDEVLDILLKWKKMIETQTGRKIK 405
            +D+WGP++  S GG  + +T ++D+SR V  Y ++HK +  D+  +WK M+E QT RK+K
Sbjct: 458  SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVK 517

Query: 404  RLRSDNGGEYKSDPFLKVC*NKGIVRHFIIPGTP*QNGVAERMNRTLVDKV*CMLSQAGL 225
             LR+DNG ++ S  F   C ++GIVRH+ +P TP QNGVAERMNRT++ K  CMLS AGL
Sbjct: 518  ILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGL 577

Query: 224  SKAFWAEALVYASYLVNRLPITALDGKTPKEVWSGQTASDYDWLHVFDCPAYFHVRESKL 45
             K FWAEA+  A YL+NR P  A+D KTP +VWSG  A +Y  L VF C AY HV  SKL
Sbjct: 578  PKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPA-NYSDLRVFGCIAYAHVDNSKL 636

Query: 44   DPRVIILCFLIFYP 3
            +PR  I C  + YP
Sbjct: 637  EPRA-IKCIFLGYP 649