BLASTX nr result
ID: Cornus23_contig00006805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00006805
(352 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADD30914.1| putative RF1 protein (chloroplast) [Cornus florida] 180 4e-43
gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis... 158 2e-36
gb|ALI30898.1| hypothetical chloroplast RF1 (plastid) [Brighamia... 152 7e-35
ref|YP_398931.1| hypothetical protein NitoCp101 [Nicotiana tomen... 150 4e-34
prf||1211235DA ORF 228 149 1e-33
gb|ADD30919.1| putative RF1 protein (chloroplast) [Liquidambar s... 149 1e-33
ref|YP_002720024.1| Ycf1 [Nicotiana tabacum] 149 1e-33
ref|YP_358745.1| hypothetical protein NisyCp102 [Nicotiana sylve... 149 1e-33
ref|YP_004891674.1| ycf1 gene product (chloroplast) [Nicotiana u... 149 1e-33
gb|ADD30903.1| putative RF1 protein (chloroplast) [Aucuba japonica] 148 1e-33
gb|ADD30921.1| putative RF1 protein (chloroplast) [Plumbago auri... 145 2e-33
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 147 3e-33
ref|YP_009040380.1| hypothetical chloroplast RF19 [Hyoscyamus ni... 147 4e-33
ref|NP_783290.1| ycf1 protein [Atropa belladonna] gi|75160521|sp... 146 7e-33
ref|YP_009142384.1| hypothetical chloroplast RF19 (chloroplast) ... 145 9e-33
ref|YP_009139524.1| hypothetical chloroplast RF19 (chloroplast) ... 145 9e-33
ref|YP_009132809.1| hypothetical chloroplast RF19 (chloroplast) ... 145 9e-33
gb|AJR30435.1| hypothetical chloroplast RF19 (chloroplast) [Vass... 145 9e-33
ref|YP_009128238.1| hypothetical chloroplast RF19 (chloroplast) ... 145 9e-33
ref|YP_009123408.1| hypothetical chloroplast RF19 (chloroplast) ... 145 9e-33
>gb|ADD30914.1| putative RF1 protein (chloroplast) [Cornus florida]
Length = 1867
Score = 180 bits (456), Expect = 4e-43
Identities = 80/87 (91%), Positives = 82/87 (94%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNSK R GMDRN VFCNGNS+KDWG FLDENPHLD EKNKLIKLKFFLWPNYRLEDLACM
Sbjct: 1781 FNSKNRNGMDRNPVFCNGNSIKDWGPFLDENPHLDSEKNKLIKLKFFLWPNYRLEDLACM 1840
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKIC 261
NRYWFDTNNGSRFSMLRIHMYPRLK+C
Sbjct: 1841 NRYWFDTNNGSRFSMLRIHMYPRLKLC 1867
>gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis corallina]
Length = 1909
Score = 158 bits (399), Expect = 2e-36
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS+ R G+DRN VFCNGN++K+ G FLDE+ HLD+EK KLIK+KFFLWPNYRLEDLACM
Sbjct: 1823 FNSRNRNGVDRNPVFCNGNNIKNCGQFLDESKHLDREKTKLIKVKFFLWPNYRLEDLACM 1882
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFSM+RIHMYPRLKI
Sbjct: 1883 NRYWFDTNNGSRFSMVRIHMYPRLKI 1908
>gb|ALI30898.1| hypothetical chloroplast RF1 (plastid) [Brighamia insignis]
gi|937501196|gb|ALI30915.1| hypothetical chloroplast RF1
(plastid) [Brighamia insignis]
Length = 2292
Score = 152 bits (385), Expect = 7e-35
Identities = 67/86 (77%), Positives = 76/86 (88%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FN K R G+DRN VFC N++K WG FLDE+ HLD++KN+LIKLKFFLWPN+RLEDLACM
Sbjct: 2206 FNFKNRNGVDRNPVFCKENNIKSWGQFLDESKHLDRDKNELIKLKFFLWPNFRLEDLACM 2265
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFSMLRI+MYPR KI
Sbjct: 2266 NRYWFDTNNGSRFSMLRIYMYPRFKI 2291
>ref|YP_398931.1| hypothetical protein NitoCp101 [Nicotiana tomentosiformis]
gi|118574759|sp|Q33BW4.1|TI214_NICTO RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Nicotiana tomentosiformis]
gi|80750995|dbj|BAE48071.1| hypothetical protein
[Nicotiana tomentosiformis]
Length = 1892
Score = 150 bits (379), Expect = 4e-34
Identities = 70/86 (81%), Positives = 75/86 (87%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN N+VK+W FLDE L KEKN+LIKLKFFLWPNYRLEDLACM
Sbjct: 1806 FNSLNWNGVDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACM 1865
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1866 NRYWFDTNNGSRFSILRIHMYPRLKI 1891
>prf||1211235DA ORF 228
Length = 228
Score = 149 bits (375), Expect = 1e-33
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN N+VK+W FLDE L KEKN+LIKLKFFLWPNYRLEDLACM
Sbjct: 142 FNSLNWNGIDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACM 201
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYP+LKI
Sbjct: 202 NRYWFDTNNGSRFSILRIHMYPQLKI 227
>gb|ADD30919.1| putative RF1 protein (chloroplast) [Liquidambar styraciflua]
Length = 1882
Score = 149 bits (375), Expect = 1e-33
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS R +DRN VFCN N++K G FLDE+ HLD+++NKLIKLKFFLWPNYRLEDLACM
Sbjct: 1796 FNSMNRNDIDRNPVFCNVNNIKSCGQFLDESKHLDRDQNKLIKLKFFLWPNYRLEDLACM 1855
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFSM+R+HMYP+LKI
Sbjct: 1856 NRYWFDTNNGSRFSMVRLHMYPQLKI 1881
>ref|YP_002720024.1| Ycf1 [Nicotiana tabacum]
Length = 1902
Score = 149 bits (375), Expect = 1e-33
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN N+VK+W FLDE L KEKN+LIKLKFFLWPNYRLEDLACM
Sbjct: 1816 FNSLNWNGIDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACM 1875
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYP+LKI
Sbjct: 1876 NRYWFDTNNGSRFSILRIHMYPQLKI 1901
>ref|YP_358745.1| hypothetical protein NisyCp102 [Nicotiana sylvestris]
gi|231660|sp|P12222.2|TI214_TOBAC RecName: Full=Protein
TIC 214; AltName: Full=Translocon at the inner envelope
membrane of chloroplasts 214; Short=AtTIC214
(chloroplast) [Nicotiana tabacum]
gi|118574758|sp|Q3C1P6.1|TI214_NICSY RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Nicotiana sylvestris]
gi|76559647|emb|CAJ32485.1| hypothetical protein
[Nicotiana tabacum] gi|77799633|dbj|BAE46722.1|
hypothetical protein [Nicotiana sylvestris]
Length = 1901
Score = 149 bits (375), Expect = 1e-33
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN N+VK+W FLDE L KEKN+LIKLKFFLWPNYRLEDLACM
Sbjct: 1815 FNSLNWNGIDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACM 1874
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYP+LKI
Sbjct: 1875 NRYWFDTNNGSRFSILRIHMYPQLKI 1900
>ref|YP_004891674.1| ycf1 gene product (chloroplast) [Nicotiana undulata]
gi|347453974|gb|AEO95632.1| hypothetical chloroplast RF19
(chloroplast) [Nicotiana undulata]
gi|347454084|gb|AEO95741.1| hypothetical chloroplast RF19
[synthetic construct]
Length = 1901
Score = 149 bits (375), Expect = 1e-33
Identities = 69/85 (81%), Positives = 74/85 (87%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN N+VK+W FLDE L KEKN+LIKLKFFLWPNYRLEDLACM
Sbjct: 1815 FNSLNWNGVDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACM 1874
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLK 255
NRYWFDTNNGSRFS+LRIHMYPRLK
Sbjct: 1875 NRYWFDTNNGSRFSILRIHMYPRLK 1899
>gb|ADD30903.1| putative RF1 protein (chloroplast) [Aucuba japonica]
Length = 1890
Score = 148 bits (374), Expect = 1e-33
Identities = 66/86 (76%), Positives = 78/86 (90%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNSK R GM+RN VFCN NS+++ G FLD++ +LD+EKN+LIKLK F+WPNYRLEDLACM
Sbjct: 1804 FNSKNRNGMNRNPVFCNENSIQNSGQFLDKSKYLDREKNELIKLKLFIWPNYRLEDLACM 1863
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFSML+IHMYP+LKI
Sbjct: 1864 NRYWFDTNNGSRFSMLKIHMYPQLKI 1889
>gb|ADD30921.1| putative RF1 protein (chloroplast) [Plumbago auriculata]
Length = 2069
Score = 145 bits (366), Expect(2) = 2e-33
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 4 NSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACMN 183
NS+ G+D+N+VFCNGN VK G FLDE LD++K KL+K KFFLWPNYRLEDLACMN
Sbjct: 1956 NSRNSKGVDKNAVFCNGNKVKTCGQFLDERKDLDRDKKKLMKFKFFLWPNYRLEDLACMN 2015
Query: 184 RYWFDTNNGSRFSMLRIHMYPRLK 255
RYWFDTNNGSRFSMLRIHMYPRLK
Sbjct: 2016 RYWFDTNNGSRFSMLRIHMYPRLK 2039
Score = 23.5 bits (49), Expect(2) = 2e-33
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 249 IENLLMVHFSSISSYHIWYIKANKQNKCTHALSY 350
++N + F + + +I +I N C HALSY
Sbjct: 2038 LKNSFTIRFKNAFTIYIGWI-----NSCAHALSY 2066
>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
(chloroplast) [Liquidambar formosana]
Length = 1878
Score = 147 bits (371), Expect = 3e-33
Identities = 66/86 (76%), Positives = 75/86 (87%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS R +DRN VFCN N++K G FLDE+ HLD+++NKLIKLKFFLWPNYRLEDLACM
Sbjct: 1792 FNSMNRNDIDRNPVFCNVNNIKSCGQFLDESKHLDRDQNKLIKLKFFLWPNYRLEDLACM 1851
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS +RIHMYP+LKI
Sbjct: 1852 NRYWFDTNNGSRFSTVRIHMYPQLKI 1877
>ref|YP_009040380.1| hypothetical chloroplast RF19 [Hyoscyamus niger]
gi|537366347|gb|AGU46528.1| hypothetical chloroplast RF19
(plastid) [Hyoscyamus niger]
Length = 1892
Score = 147 bits (370), Expect = 4e-33
Identities = 68/86 (79%), Positives = 74/86 (86%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L K+KN+LIKLKFFLWPNYRLEDLACM
Sbjct: 1806 FNSLNWNGVDRNSVFCNETNVKNWSKFLDERKPLYKDKNELIKLKFFLWPNYRLEDLACM 1865
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1866 NRYWFDTNNGSRFSILRIHMYPRLKI 1891
>ref|NP_783290.1| ycf1 protein [Atropa belladonna] gi|75160521|sp|Q8S8U2.1|TI214_ATRBE
RecName: Full=Protein TIC 214; AltName: Full=Translocon
at the inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Atropa belladonna]
gi|20068391|emb|CAC88104.1| ycf1 protein [Atropa
belladonna]
Length = 1880
Score = 146 bits (368), Expect = 7e-33
Identities = 68/86 (79%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIKLKFFLWPNYRLEDLACM
Sbjct: 1794 FNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACM 1853
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFD NNGSRFS+LRIHMYPRLKI
Sbjct: 1854 NRYWFDNNNGSRFSILRIHMYPRLKI 1879
>ref|YP_009142384.1| hypothetical chloroplast RF19 (chloroplast) [Iochroma tingoanum]
gi|820957871|gb|AKH02376.1| hypothetical chloroplast RF19
(chloroplast) [Iochroma tingoanum]
Length = 1889
Score = 145 bits (367), Expect = 9e-33
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIK KFF+WPNYRLEDLACM
Sbjct: 1803 FNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYKEKNELIKFKFFIWPNYRLEDLACM 1862
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1863 NRYWFDTNNGSRFSILRIHMYPRLKI 1888
>ref|YP_009139524.1| hypothetical chloroplast RF19 (chloroplast) [Dunalia solanacea]
gi|817597907|gb|AKF78467.1| hypothetical chloroplast RF19
(chloroplast) [Dunalia solanacea]
Length = 1878
Score = 145 bits (367), Expect = 9e-33
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIK KFF+WPNYRLEDLACM
Sbjct: 1792 FNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYKEKNELIKFKFFIWPNYRLEDLACM 1851
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1852 NRYWFDTNNGSRFSILRIHMYPRLKI 1877
>ref|YP_009132809.1| hypothetical chloroplast RF19 (chloroplast) [Dunalia brachyacantha]
gi|800876109|gb|AKA66589.1| hypothetical chloroplast RF19
(chloroplast) [Dunalia brachyacantha]
Length = 1889
Score = 145 bits (367), Expect = 9e-33
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIK KFF+WPNYRLEDLACM
Sbjct: 1803 FNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYKEKNELIKFKFFIWPNYRLEDLACM 1862
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1863 NRYWFDTNNGSRFSILRIHMYPRLKI 1888
>gb|AJR30435.1| hypothetical chloroplast RF19 (chloroplast) [Vassobia breviflora]
Length = 1889
Score = 145 bits (367), Expect = 9e-33
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIK KFF+WPNYRLEDLACM
Sbjct: 1803 FNSLNWNGVDRNSVFCNETNVKNWSKFLDERKPLYKEKNELIKFKFFIWPNYRLEDLACM 1862
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1863 NRYWFDTNNGSRFSILRIHMYPRLKI 1888
>ref|YP_009128238.1| hypothetical chloroplast RF19 (chloroplast) [Saracha punctata]
gi|758185563|gb|AJO61638.1| hypothetical chloroplast RF19
(chloroplast) [Saracha punctata]
Length = 1889
Score = 145 bits (367), Expect = 9e-33
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIK KFF+WPNYRLEDLACM
Sbjct: 1803 FNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYKEKNELIKFKFFIWPNYRLEDLACM 1862
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1863 NRYWFDTNNGSRFSILRIHMYPRLKI 1888
>ref|YP_009123408.1| hypothetical chloroplast RF19 (chloroplast) [Iochroma nitidum]
gi|756762045|gb|AJM70157.1| hypothetical chloroplast RF19
(chloroplast) [Iochroma nitidum]
Length = 1889
Score = 145 bits (367), Expect = 9e-33
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 1 FNSKKRIGMDRNSVFCNGNSVKDWGLFLDENPHLDKEKNKLIKLKFFLWPNYRLEDLACM 180
FNS G+DRNSVFCN +VK+W FLDE L KEKN+LIK KFF+WPNYRLEDLACM
Sbjct: 1803 FNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYKEKNELIKFKFFIWPNYRLEDLACM 1862
Query: 181 NRYWFDTNNGSRFSMLRIHMYPRLKI 258
NRYWFDTNNGSRFS+LRIHMYPRLKI
Sbjct: 1863 NRYWFDTNNGSRFSILRIHMYPRLKI 1888