BLASTX nr result

ID: Cornus23_contig00005321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00005321
         (635 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...    68   4e-09
gb|KDO55176.1| hypothetical protein CISIN_1g048615mg [Citrus sin...    62   2e-07
ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containin...    62   2e-07
ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citr...    62   2e-07

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41 [Vitis
            vinifera] gi|731419004|ref|XP_010660871.1| PREDICTED:
            zinc finger CCCH domain-containing protein 41 [Vitis
            vinifera]
          Length = 948

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = -1

Query: 404  ADPPASKGPSDAHIQPAGEVSSIVSQEVAASGNGSSENMEGRDSGGPGGEHMEWEEDFQS 225
            + P ASKG SDA +QPAG+V+  VS E   SGNG  E+ E + S     EH E + +FQ 
Sbjct: 877  SSPSASKGSSDADLQPAGKVACSVSLETVLSGNGEPEDSERKSS----MEHKEPDGNFQ- 931

Query: 224  SSSTMPCEKESPKGNVC 174
            +S T+ CE++SPK NVC
Sbjct: 932  ASPTLLCEEQSPKSNVC 948


>gb|KDO55176.1| hypothetical protein CISIN_1g048615mg [Citrus sinensis]
          Length = 634

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = -1

Query: 386 KGPSDAHIQPAGEVSSIVSQEVAASGNGSSENMEGRDSGGPGGEHMEWEEDFQSSSSTMP 207
           KG SD  +Q   ++SS+VSQE AASGN  SEN E + S     EH E +E  Q S + + 
Sbjct: 568 KGSSDTDVQKEEKLSSVVSQEAAASGNAESENSERKSS----VEHAELQEVSQPSPTPII 623

Query: 206 CEKESPKGNVC 174
            E+ESPK NVC
Sbjct: 624 AEEESPKDNVC 634


>ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like isoform
            X1 [Citrus sinensis] gi|568832073|ref|XP_006470268.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            41-like isoform X2 [Citrus sinensis]
            gi|568832075|ref|XP_006470269.1| PREDICTED: zinc finger
            CCCH domain-containing protein 41-like isoform X3 [Citrus
            sinensis] gi|568832077|ref|XP_006470270.1| PREDICTED:
            zinc finger CCCH domain-containing protein 41-like
            isoform X4 [Citrus sinensis]
          Length = 947

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = -1

Query: 386  KGPSDAHIQPAGEVSSIVSQEVAASGNGSSENMEGRDSGGPGGEHMEWEEDFQSSSSTMP 207
            KG SD  +Q   ++SS+VSQE AASGN  SEN E + S     EH E +E  Q S + + 
Sbjct: 881  KGSSDTDVQKEEKLSSVVSQEAAASGNAESENSERKSS----VEHAELQEVSQPSPTPII 936

Query: 206  CEKESPKGNVC 174
             E+ESPK NVC
Sbjct: 937  AEEESPKDNVC 947


>ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citrus clementina]
            gi|557549178|gb|ESR59807.1| hypothetical protein
            CICLE_v10014173mg [Citrus clementina]
          Length = 946

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/71 (49%), Positives = 43/71 (60%)
 Frame = -1

Query: 386  KGPSDAHIQPAGEVSSIVSQEVAASGNGSSENMEGRDSGGPGGEHMEWEEDFQSSSSTMP 207
            KG SD  +Q   ++SS+VSQE AASGN  SEN E + S     EH E +E  Q S + M 
Sbjct: 880  KGSSDTDVQKEEKLSSVVSQEAAASGNAESENSERKSS----VEHAELQEVSQPSPTPMS 935

Query: 206  CEKESPKGNVC 174
             E+ESPK  VC
Sbjct: 936  AEEESPKDTVC 946


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