BLASTX nr result
ID: Cornus23_contig00004254
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00004254
(544 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010662206.1| PREDICTED: DNA-directed RNA polymerases II, ... 111 2e-22
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ... 109 7e-22
ref|XP_008812669.1| PREDICTED: DNA-directed RNA polymerases II, ... 109 9e-22
ref|XP_011082823.1| PREDICTED: DNA-directed RNA polymerases II, ... 108 2e-21
ref|XP_012836463.1| PREDICTED: DNA-directed RNA polymerases II, ... 108 2e-21
ref|XP_007023679.1| DNA directed RNA polymerase, 7 kDa subunit [... 107 4e-21
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1... 106 6e-21
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr... 106 6e-21
gb|KGN64215.1| hypothetical protein Csa_1G043180 [Cucumis sativus] 106 6e-21
gb|KFK33039.1| hypothetical protein AALP_AA6G322600 [Arabis alpina] 105 1e-20
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr... 105 1e-20
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part... 105 1e-20
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ... 105 1e-20
ref|XP_009382111.1| PREDICTED: DNA-directed RNA polymerases II, ... 104 3e-20
ref|NP_001172391.1| Os01g0530366 [Oryza sativa Japonica Group] g... 103 4e-20
emb|CDY24079.1| BnaA06g00770D [Brassica napus] 103 5e-20
emb|CDY25829.1| BnaA05g14200D [Brassica napus] gi|674930861|emb|... 103 5e-20
emb|CBI25651.3| unnamed protein product [Vitis vinifera] 103 5e-20
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp.... 103 5e-20
ref|XP_001784402.1| predicted protein [Physcomitrella patens] gi... 103 5e-20
>ref|XP_010662206.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12
[Vitis vinifera] gi|747100132|ref|XP_011098141.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Sesamum indicum]
gi|297738145|emb|CBI27346.3| unnamed protein product
[Vitis vinifera] gi|870859919|gb|KMT11289.1|
hypothetical protein BVRB_5g109730 [Beta vulgaris subsp.
vulgaris] gi|902220317|gb|KNA18575.1| hypothetical
protein SOVF_069460 [Spinacia oleracea]
Length = 51
Score = 111 bits (278), Expect = 2e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Glycine max]
gi|567912183|ref|XP_006448405.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|593704333|ref|XP_007152540.1| hypothetical protein
PHAVU_004G138700g [Phaseolus vulgaris]
gi|720029948|ref|XP_010265372.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 12 [Nelumbo
nucifera] gi|720075874|ref|XP_010279451.1| PREDICTED:
DNA-directed RNA polymerases II, IV and V subunit 12
[Nelumbo nucifera] gi|720075877|ref|XP_010279452.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Nelumbo nucifera]
gi|802550689|ref|XP_012093117.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 12 [Jatropha
curcas] gi|802551076|ref|XP_012093328.1| PREDICTED:
DNA-directed RNA polymerases II, IV and V subunit 12
[Jatropha curcas] gi|950931647|ref|XP_014507408.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Vigna radiata var. radiata]
gi|255630274|gb|ACU15492.1| unknown [Glycine max]
gi|557551016|gb|ESR61645.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|561025849|gb|ESW24534.1| hypothetical protein
PHAVU_004G138700g [Phaseolus vulgaris]
gi|641858180|gb|KDO76902.1| hypothetical protein
CISIN_1g035461mg [Citrus sinensis]
gi|734385013|gb|KHN24498.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC4 [Glycine soja]
gi|947059976|gb|KRH09382.1| hypothetical protein
GLYMA_16G212700 [Glycine max]
gi|947090210|gb|KRH38875.1| hypothetical protein
GLYMA_09G164200 [Glycine max]
Length = 51
Score = 109 bits (273), Expect = 7e-22
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_008812669.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12
[Phoenix dactylifera]
Length = 51
Score = 109 bits (272), Expect = 9e-22
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_011082823.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
12-like [Sesamum indicum]
Length = 51
Score = 108 bits (270), Expect = 2e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MD PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDSQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_012836463.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12
[Erythranthe guttatus] gi|848900805|ref|XP_012850578.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Erythranthe guttatus]
gi|604312765|gb|EYU26259.1| hypothetical protein
MIMGU_mgv1a017602mg [Erythranthe guttata]
gi|604334021|gb|EYU38219.1| hypothetical protein
MIMGU_mgv1a017594mg [Erythranthe guttata]
Length = 51
Score = 108 bits (270), Expect = 2e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSYICGDCGQENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_007023679.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
gi|508779045|gb|EOY26301.1| DNA directed RNA polymerase,
7 kDa subunit [Theobroma cacao]
gi|763772083|gb|KJB39206.1| hypothetical protein
B456_007G002300 [Gossypium raimondii]
gi|763772084|gb|KJB39207.1| hypothetical protein
B456_007G002300 [Gossypium raimondii]
gi|763772085|gb|KJB39208.1| hypothetical protein
B456_007G002300 [Gossypium raimondii]
gi|763772086|gb|KJB39209.1| hypothetical protein
B456_007G002300 [Gossypium raimondii]
gi|763772087|gb|KJB39210.1| hypothetical protein
B456_007G002300 [Gossypium raimondii]
gi|763772088|gb|KJB39211.1| hypothetical protein
B456_007G002300 [Gossypium raimondii]
gi|763801336|gb|KJB68291.1| hypothetical protein
B456_010G236600 [Gossypium raimondii]
Length = 51
Score = 107 bits (266), Expect = 4e-21
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPV+YICGDCGQENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVTYICGDCGQENTLKHGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
12; AltName: Full=DNA-directed RNA Polymerase II subunit
K gi|9759147|dbj|BAB09703.1| unnamed protein product
[Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
unknown protein [Arabidopsis thaliana]
gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
polymerase II polypeptide K [Arabidopsis thaliana]
gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
Length = 51
Score = 106 bits (265), Expect = 6e-21
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131670|ref|XP_006392764.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131674|ref|XP_006392765.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089341|gb|ESQ30049.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089342|gb|ESQ30050.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089343|gb|ESQ30051.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
Length = 51
Score = 106 bits (265), Expect = 6e-21
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>gb|KGN64215.1| hypothetical protein Csa_1G043180 [Cucumis sativus]
Length = 51
Score = 106 bits (265), Expect = 6e-21
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSYICGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>gb|KFK33039.1| hypothetical protein AALP_AA6G322600 [Arabis alpina]
Length = 51
Score = 105 bits (263), Expect = 1e-20
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPLPEPVTYVCGDCGQENTLKTGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
gi|557106544|gb|ESQ46859.1| hypothetical protein
EUTSA_v10028022mg [Eutrema salsugineum]
Length = 51
Score = 105 bits (263), Expect = 1e-20
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPLPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
gi|482553592|gb|EOA17785.1| hypothetical protein
CARUB_v10006178mg, partial [Capsella rubella]
Length = 68
Score = 105 bits (263), Expect = 1e-20
Identities = 47/54 (87%), Positives = 52/54 (96%), Gaps = 1/54 (1%)
Frame = -1
Query: 394 SSMDPP-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
++MD P PEPV+Y+CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 15 NTMDQPLPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 68
>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
DNA-directed RNA polymerase I, II, and III polypeptide
isoform 2, partial [Zea mays]
Length = 100
Score = 105 bits (263), Expect = 1e-20
Identities = 49/54 (90%), Positives = 51/54 (94%), Gaps = 1/54 (1%)
Frame = -1
Query: 394 SSMDPP-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
S+MDP PEPVSY+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 47 STMDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 100
>ref|XP_009382111.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12
[Musa acuminata subsp. malaccensis]
Length = 52
Score = 104 bits (259), Expect = 3e-20
Identities = 48/52 (92%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
Frame = -1
Query: 388 MDP-PPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPLQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 52
>ref|NP_001172391.1| Os01g0530366 [Oryza sativa Japonica Group]
gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
sativa Japonica Group] gi|615276275|ref|NP_001278509.1|
LOC100285004 [Zea mays] gi|242048352|ref|XP_002461922.1|
hypothetical protein SORBIDRAFT_02g010660 [Sorghum
bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
protein SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|195609858|gb|ACG26759.1| DNA-directed RNA polymerases
I, II, and III 7.3 kDa polypeptide [Zea mays]
gi|195620974|gb|ACG32317.1| DNA-directed RNA polymerases
I, II, and III 7.3 kDa polypeptide [Zea mays]
gi|195645780|gb|ACG42358.1| DNA-directed RNA polymerases
I, II, and III 7.3 kDa polypeptide [Zea mays]
gi|195646246|gb|ACG42591.1| DNA-directed RNA polymerases
I, II, and III 7.3 kDa polypeptide [Zea mays]
gi|218188380|gb|EEC70807.1| hypothetical protein
OsI_02267 [Oryza sativa Indica Group]
gi|222618595|gb|EEE54727.1| hypothetical protein
OsJ_02072 [Oryza sativa Japonica Group]
gi|241925299|gb|EER98443.1| hypothetical protein
SORBIDRAFT_02g010660 [Sorghum bicolor]
gi|241940338|gb|EES13483.1| hypothetical protein
SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
Japonica Group] gi|255676033|dbj|BAH92949.1|
Os05g0151800 [Oryza sativa Japonica Group]
gi|937896524|dbj|BAS72504.1| Os01g0530366 [Oryza sativa
Japonica Group] gi|944259201|gb|KQL23458.1| hypothetical
protein SETIT_031842mg [Setaria italica]
Length = 52
Score = 103 bits (258), Expect = 4e-20
Identities = 48/52 (92%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
Frame = -1
Query: 388 MDPP-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MDP PEPVSY+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>emb|CDY24079.1| BnaA06g00770D [Brassica napus]
Length = 104
Score = 103 bits (257), Expect = 5e-20
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MD PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 54 MDQQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 104
>emb|CDY25829.1| BnaA05g14200D [Brassica napus] gi|674930861|emb|CDY02497.1|
BnaA08g01040D [Brassica napus]
Length = 51
Score = 103 bits (257), Expect = 5e-20
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
MD PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDQQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
Length = 82
Score = 103 bits (257), Expect = 5e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = -1
Query: 388 MDPPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ 248
MDP PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ 47
>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316495|gb|EFH46918.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 52
Score = 103 bits (257), Expect = 5e-20
Identities = 46/52 (88%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
Frame = -1
Query: 388 MDPP-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
M+P PEPV+Y+CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MEPAQPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 52
>ref|XP_001784402.1| predicted protein [Physcomitrella patens]
gi|162664073|gb|EDQ50807.1| predicted protein
[Physcomitrella patens]
Length = 56
Score = 103 bits (257), Expect = 5e-20
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = -1
Query: 382 PPPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 236
PPPEPV+Y+CGDCG +NTLKPGDVIQCRECGYRILYKKRTRRIVQ+EAR
Sbjct: 8 PPPEPVTYLCGDCGADNTLKPGDVIQCRECGYRILYKKRTRRIVQFEAR 56