BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00000170
         (356 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001801796.1| hypothetical protein SNOG_11556 [Parastagono...    76   2e-19
ref|XP_003841371.1| similar to DNA-directed RNA polymerase ii la...    74   5e-11

>ref|XP_001801796.1| hypothetical protein SNOG_11556 [Parastagonospora nodorum SN15]
            gi|160703256|gb|EAT81264.2| hypothetical protein
            SNOG_11556 [Parastagonospora nodorum SN15]
          Length = 1720

 Score = 76.3 bits (186), Expect(2) = 2e-19
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 216  LCSHVSRVFRHQPRLARLLSNFARVLANVARYQQPTLWRNIA*LCCNQPTVLAHLTWPVP 37
            L + V+ +F  QP + RLLSNFA VL+N +R+QQPTLWR  + + C+QPTVLA +TW + 
Sbjct: 1542 LRTDVAWLFWSQPNVPRLLSNFAGVLSNFSRHQQPTLWRYFSDIRCDQPTVLADITWSIA 1601

Query: 36   NIA*LSLPDIPQ 1
            N+A L   D+ +
Sbjct: 1602 NVAKLQFTDVSE 1613



 Score = 46.2 bits (108), Expect(2) = 2e-19
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = -1

Query: 356  GMGMGGYEAAFSPLAAAGGGDEGSFT 279
            G+GMGG++AAFSP+A AGG DEG FT
Sbjct: 1515 GIGMGGFDAAFSPIAHAGGNDEGGFT 1540


>ref|XP_003841371.1| similar to DNA-directed RNA polymerase ii largest subunit
            [Leptosphaeria maculans JN3] gi|312217945|emb|CBX97892.1|
            similar to DNA-directed RNA polymerase ii largest subunit
            [Leptosphaeria maculans JN3]
          Length = 1875

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 46/100 (46%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = -1

Query: 356  GMGMGGYEAAFSPLAAAGGGDEGSFTAXXXXXXXXXXXXXXXXXXXXFAPMSPGFSGTSP 177
            GMGMG YEA FSPLAAAGG D+G FTA                    FA MSPGFSGTSP
Sbjct: 1645 GMGMGSYEAQFSPLAAAGGADDGGFTAYGGGYGDGGFSPYSGGRSPGFATMSPGFSGTSP 1704

Query: 176  VXXXXXXXXXXXXXXXXXXXXPRFGATSPSFAA--TSPQY 63
            V                    P+F ATSP + A  TSP Y
Sbjct: 1705 VSPGFSPTSPAYSPTSPGISSPQFAATSPGYMASPTSPHY 1744