BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00000122
         (6035 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra...  2286   0.0  
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...  2283   0.0  
ref|XP_012083389.1| PREDICTED: mediator of RNA polymerase II tra...  2279   0.0  
gb|KDP28624.1| hypothetical protein JCGZ_14395 [Jatropha curcas]     2279   0.0  
ref|XP_007051802.1| Mediator of RNA polymerase II transcription ...  2259   0.0  
ref|XP_007051800.1| Mediator of RNA polymerase II transcription ...  2259   0.0  
ref|XP_007051801.1| Mediator of RNA polymerase II transcription ...  2216   0.0  
ref|XP_009629491.1| PREDICTED: mediator of RNA polymerase II tra...  2210   0.0  
ref|XP_009757489.1| PREDICTED: mediator of RNA polymerase II tra...  2204   0.0  
ref|XP_011036341.1| PREDICTED: mediator of RNA polymerase II tra...  2201   0.0  
ref|XP_011036316.1| PREDICTED: mediator of RNA polymerase II tra...  2192   0.0  
ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra...  2178   0.0  
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra...  2176   0.0  
gb|KHG08703.1| Putative mediator of RNA polymerase II transcript...  2139   0.0  
gb|KHG17230.1| Putative mediator of RNA polymerase II transcript...  2127   0.0  
ref|XP_012437707.1| PREDICTED: mediator of RNA polymerase II tra...  2125   0.0  
ref|XP_012489946.1| PREDICTED: mediator of RNA polymerase II tra...  2114   0.0  
ref|XP_010055127.1| PREDICTED: mediator of RNA polymerase II tra...  2101   0.0  
ref|XP_011092371.1| PREDICTED: mediator of RNA polymerase II tra...  2093   0.0  
gb|KJB38928.1| hypothetical protein B456_007G099500 [Gossypium r...  2080   0.0  

>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Fragaria vesca subsp. vesca]
            gi|764625197|ref|XP_011469016.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Fragaria
            vesca subsp. vesca]
          Length = 2261

 Score = 2286 bits (5924), Expect = 0.0
 Identities = 1205/1899 (63%), Positives = 1422/1899 (74%), Gaps = 34/1899 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPS GGSDLVDNSRRAYT SALVEMLRYL+L+VPD+FVALDCFPLPPCVVS+V N+GS 
Sbjct: 381  REPSQGGSDLVDNSRRAYTVSALVEMLRYLVLSVPDSFVALDCFPLPPCVVSYVANEGS- 439

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            + K+ +D  K+K G  EV ++FR K  +AQ+QSL+  H VSSIQKRADNL  +  P  P 
Sbjct: 440  LPKLSDDVRKIKIGSAEVASVFRSKAFDAQFQSLAFDHVVSSIQKRADNLEKSTSPSYPN 499

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCDCV-DEGWTAEVNPCLRSSMKWIGTVTLS 5497
             ++AKAVQ LD++L+QGDV  AYRFLFED CD + +E W AEV+P LR+S+KWIGTV LS
Sbjct: 500  HSIAKAVQALDRSLVQGDVLGAYRFLFEDPCDGIMNENWVAEVSPRLRTSLKWIGTVNLS 559

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
            F+CS+FFLCEWATCDFRDFRTA P  LKFTGRKDFSQ++IA RLL L  RD+Q S   KN
Sbjct: 560  FICSVFFLCEWATCDFRDFRTAPPGKLKFTGRKDFSQVHIAARLLLLKIRDLQSSPQHKN 619

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
             N        KG  Q NN+   + +G++YE KN   SV  ++ + S++F+SPGPLHD++V
Sbjct: 620  DNPA------KGSCQQNNFPVRSFMGSSYESKNK-SSVHQRSVKSSNIFESPGPLHDVIV 672

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQH+   GEGFKRLQ L+ EL RSGIFYP AYVRQLIV GIMD NGP+ + DR KRH
Sbjct: 673  CWIDQHDVGKGEGFKRLQFLVIELIRSGIFYPHAYVRQLIVSGIMDINGPVIESDRRKRH 732

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSK 4777
             ++LK LPG ++ DALEEA I E P L E +  YSNERRL+L+GF   H    S KS+ K
Sbjct: 733  YQVLKLLPGLFMHDALEEAGIAEGPKLLEAMCSYSNERRLILRGFLGDHNKNMSMKSALK 792

Query: 4776 EQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRG---ADLEELKAAIXXXXXXXX 4606
             Q+++     +G  P S DQWK  +  S  L GK+  RG   AD+EELK AI        
Sbjct: 793  -QENNAIPGKDGGLPVSADQWKTVELPSNILPGKSGKRGKSDADVEELKEAISLLLQLPY 851

Query: 4605 XXXXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQG 4426
                            GS+KRP   ISNK + GEG+PGCEEC   KRQK+SEE+SSY+QG
Sbjct: 852  SSTPPTDTGLEESQ--GSLKRPFGLISNKMDFGEGTPGCEECRRAKRQKVSEERSSYIQG 909

Query: 4425 FSPNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEG 4249
             SP  SDDE+ WW+RK  KS E  KVD P+K +KQV++ RQK  RKTQSLAQLAA+RIEG
Sbjct: 910  NSPIPSDDEDTWWMRKIPKSSEPLKVDLPVKLTKQVSKNRQKGPRKTQSLAQLAASRIEG 969

Query: 4248 SQGASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVI 4072
            SQGASTSHVC+++I+CPHHR+G EGEA K  D  + NH GDIVSIGK LK+LRF EK+ I
Sbjct: 970  SQGASTSHVCNNKINCPHHRSGLEGEAPKPTDTTKMNHAGDIVSIGKALKRLRFAEKRTI 1029

Query: 4071 TVWLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDL 3892
            TVWL+T +RQLVEE EKT AKV Q+ R F AV D+SS RWKLGEDELSA LY MDVSDDL
Sbjct: 1030 TVWLMTNIRQLVEETEKTIAKVGQFGRNFTAVDDRSSTRWKLGEDELSAALYFMDVSDDL 1089

Query: 3891 VSAVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVA 3712
            VSAV+FLLWLLPK++TSPNST+ SGR +L+LPRNV  Q+CEVGE+FL+SS+RRYENIL+A
Sbjct: 1090 VSAVKFLLWLLPKVITSPNSTIHSGRNILLLPRNVEGQVCEVGEAFLISSLRRYENILLA 1149

Query: 3711 ADLIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDK 3532
             DLIP+ LSA MHRA+ ++ASNGR+SGSAA VY+RYLLK++ NVASV++WEK+FK +CDK
Sbjct: 1150 TDLIPEVLSATMHRASAVVASNGRLSGSAALVYSRYLLKRYGNVASVIEWEKSFKLSCDK 1209

Query: 3531 RLISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHV--E 3358
            RL SELE+ +S+DGE G PLGVP+GVEDLDD+ RQKIS  R SRVG++MR++VQ++V  +
Sbjct: 1210 RLYSELEAGQSVDGELGFPLGVPSGVEDLDDYFRQKISGVRPSRVGMNMREIVQKNVNVD 1269

Query: 3357 EAFQFFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXX 3178
            +AFQ+FSGKERKLF   T K PA+EKWDDGYQIA +I+  LMDC RQTGGAAQEGDP   
Sbjct: 1270 DAFQYFSGKERKLFAGSTPKAPAVEKWDDGYQIAHKIITELMDCIRQTGGAAQEGDPTLV 1329

Query: 3177 XXXXXXXXXXVGLFIAK---------PSSTVPLDYARRILRIHITCLCLLKEALGERQSR 3025
                      +G  +AK         PS+T  L +ARRILRIHI+CLCLLKEALGERQ+R
Sbjct: 1330 SSAVSAIIGNIGPILAKVPDFRAVGYPSATDSLHFARRILRIHISCLCLLKEALGERQTR 1389

Query: 3024 VFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSN--------------AKTTXXXX 2887
            VFE+ALATEA SALA   +PGK  R Q   SPE+HDSN               K      
Sbjct: 1390 VFEVALATEACSALAVAFSPGKGSRNQ---SPESHDSNEVLNSSSKVVIGRATKVAAAVS 1446

Query: 2886 XXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEVSV 2707
                         LER+VTVFR KE +D+IQF+                 K D  +EV V
Sbjct: 1447 ALIIGAVINGITSLERLVTVFRFKEKLDIIQFVRNSRSNSNGNARSAGALKGDTSLEVYV 1506

Query: 2706 IWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRFIL 2527
             WFR+LVGNCRT+SDG++VELL E SI+ALSRMQR LPL LV PPAYSIFAFVIWR F+L
Sbjct: 1507 HWFRLLVGNCRTVSDGMVVELLSEPSIIALSRMQRMLPLRLVFPPAYSIFAFVIWRPFLL 1566

Query: 2526 NANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAMLEL 2347
            N ++  REDINQLYQSL +A+GD IKHLPFRDVCLRD++GFYD+V AD +D+EFAAMLEL
Sbjct: 1567 NTSLAVREDINQLYQSLAIAVGDIIKHLPFRDVCLRDSQGFYDLVAADGSDAEFAAMLEL 1626

Query: 2346 SGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENETKLL 2176
            +G D+HLK+MAFVPLRARLFLNA++DCKMP S   Q +GN +SGQGES V Y+E ETKL+
Sbjct: 1627 NGSDIHLKSMAFVPLRARLFLNALLDCKMPNSLFTQGEGNHLSGQGESKVHYSERETKLV 1686

Query: 2175 DKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAASE 1996
            DKLVH++DTLQPAKFHWQW+ELRLLLNEQALIEKLE +D SL DAI S SP+P+K AASE
Sbjct: 1687 DKLVHILDTLQPAKFHWQWVELRLLLNEQALIEKLETQDMSLVDAIRSSSPSPEKAAASE 1746

Query: 1995 NENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSIRQ 1816
            NE  FIEIILTRLLVRPDAA LF++VVHLFGR L DSMLLQ KWFLGG DVLFGRK+IRQ
Sbjct: 1747 NEKYFIEIILTRLLVRPDAAALFSDVVHLFGRSLADSMLLQVKWFLGGPDVLFGRKTIRQ 1806

Query: 1815 RLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLKSH 1636
            RL+NIAESKGLSTK  F KPWGW  S FDI TN+ DK KFE TSLEEGE+VE+GT+ K H
Sbjct: 1807 RLMNIAESKGLSTKTHFWKPWGWFTSEFDILTNRGDKKKFEVTSLEEGEMVEEGTESKRH 1866

Query: 1635 GRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQMN 1456
            G+GS+ + D EG +VSQQHVTERALIEL+LPCIDQSSDDSRNTFA+DLIKQ++NIEQQ++
Sbjct: 1867 GKGSSPIFDNEGQSVSQQHVTERALIELLLPCIDQSSDDSRNTFANDLIKQLSNIEQQIS 1926

Query: 1455 AVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRASMS 1276
             VTRG SKQAG   SGIEG  +KGNNRK +RGGSPGLARR  G  D  P SPAALRASMS
Sbjct: 1927 TVTRGTSKQAGQTPSGIEGPTSKGNNRKGIRGGSPGLARRAAGAADSAPPSPAALRASMS 1986

Query: 1275 LRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLLKRX 1096
            LRLQ L+RLLP+I ADREPS+RNMRH  A V+LRLLG+RVVHE      + + SSL KR 
Sbjct: 1987 LRLQLLLRLLPIIYADREPSARNMRHGLALVVLRLLGNRVVHEYQSTPLTPSQSSLSKRE 2046

Query: 1095 XXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFPVFD 916
                         DLS ES            LSS +PSWL+   S+K T E  K F  FD
Sbjct: 2047 SDSSTDAATAAFTDLSSESLFDELLLVLHGLLSSCQPSWLR---STKPTKESGKGFVAFD 2103

Query: 915  REVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPSISF 736
             E+AE+LQN+LD MQLPD++RWRIQ+AMP++ PS+R  +SC PP V   ALA LQPS S 
Sbjct: 2104 PELAENLQNDLDRMQLPDSVRWRIQTAMPVIIPSIRCFVSCHPPPVPNMALAVLQPSTSN 2163

Query: 735  SGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPSSSN 556
            SG+   N N  Q+N   LART  +V GK+KPLP  QD DMEIDPWTLLEDGAGS PSS N
Sbjct: 2164 SGIYSTNLNTPQKNQFPLARTVTTVTGKSKPLP-SQDNDMEIDPWTLLEDGAGSGPSSCN 2222

Query: 555  TATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            +A I   DH NLRASSWLKG VRVRR DL YIGAVDDDS
Sbjct: 2223 SALIGSADHGNLRASSWLKGAVRVRRKDLTYIGAVDDDS 2261


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score = 2283 bits (5915), Expect = 0.0
 Identities = 1219/1900 (64%), Positives = 1419/1900 (74%), Gaps = 35/1900 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYTTSAL+EMLRYLILAVPDTFVA+DCFPLPP V+S+ VNDG F
Sbjct: 383  REPSPGGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVAVDCFPLPPSVMSYAVNDGVF 442

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +S+  E+A K K+    V  +FR KGL+AQYQS S    V SIQKR DNLA AA PG   
Sbjct: 443  VSRASEEARKTKDNSAGVVGVFRSKGLDAQYQSFSFNQVVLSIQKREDNLAKAACPGYLV 502

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
             + AKAVQ LDKALI GD++ AY FLFE+ CD  VD GW  EV+PCLRSS+KW+G+V LS
Sbjct: 503  HSAAKAVQALDKALILGDIKEAYNFLFENFCDGAVDGGWIEEVSPCLRSSLKWMGSVDLS 562

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
            FVCS+FFLCEWATCD+RDFRTA PH LKFTGRKDFSQ+YIA RLLKL  RD+Q     KN
Sbjct: 563  FVCSVFFLCEWATCDYRDFRTAPPHDLKFTGRKDFSQVYIATRLLKLKFRDLQSKPRRKN 622

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
            +   G+NS  KG  Q +NY G   + + YE   N K V+ K+   SD+F+SPGPLHDI+V
Sbjct: 623  EKSLGINSLAKGLSQ-HNYVGRAHVRSGYETIGNSKIVNAKSTNSSDIFESPGPLHDIIV 681

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE Q  EG KRLQLLI EL RSGIFYPQ+YVRQLI+ GIMD N P  +LDR KRH
Sbjct: 682  CWIDQHEVQKREGLKRLQLLIVELIRSGIFYPQSYVRQLIISGIMDANVPAVELDRRKRH 741

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKS--S 4783
             +ILKQLPG ++ D LEEARI E P L E + +YSNERRL+L G     +  +S KS  S
Sbjct: 742  YQILKQLPGLFIHDILEEARIAEGPELLEAMLIYSNERRLLLCGILSE-QCQDSVKSNIS 800

Query: 4782 SKEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXX 4603
             ++QKHH TS+ + AS AS DQW+  QS S  L+ K + R AD++ELK++I         
Sbjct: 801  VQKQKHHTTSIKDSASSASFDQWRTIQSQSNLLT-KKIKRNADIKELKSSISLLLQLPNL 859

Query: 4602 XXXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGF 4423
                            SVKR   SISNK +L EG+PGCE+C   KRQKLSEE+SS LQG 
Sbjct: 860  SSSSDTGLEESQ---SSVKRAAESISNKMDLFEGTPGCEDCRRAKRQKLSEERSSCLQGH 916

Query: 4422 SPNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGS 4246
            SP +SDD+++WW+RKG KS +S KVD PLK SKQV++GRQK+VRKTQSLAQLAAARIEGS
Sbjct: 917  SP-ISDDDDSWWMRKGTKSLDSSKVDVPLKSSKQVSKGRQKVVRKTQSLAQLAAARIEGS 975

Query: 4245 QGASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITV 4066
            QGASTSHVCD+++SCPHH++G EGE KSVDGI+T H GDIVSIGK LK+LRFVEK+ ITV
Sbjct: 976  QGASTSHVCDNKVSCPHHKSGMEGE-KSVDGIKTLHGGDIVSIGKALKQLRFVEKRSITV 1034

Query: 4065 WLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVS 3886
            WL+T V+QLVEE E+TA K SQ+SR F    D+SS+RWKLGEDELSA+LY+MDV +DLVS
Sbjct: 1035 WLVTAVKQLVEEAERTAIKSSQFSRSFVPADDRSSIRWKLGEDELSAVLYVMDVCNDLVS 1094

Query: 3885 AVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAAD 3706
            A + LLWLLPK++++ NST+ SGR  +MLPRNV +  CEVGE+FLLS +RRYEN  VA D
Sbjct: 1095 AAKLLLWLLPKVVSNHNSTIHSGRNTMMLPRNVENHACEVGEAFLLSCLRRYENTFVATD 1154

Query: 3705 LIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRL 3526
            L+P+ L+ A+ R   ++ SNGRVSGSAA  Y+RYLLKK+ NV SV++WEKN K+T DKRL
Sbjct: 1155 LVPEVLTTAVQRVLALLTSNGRVSGSAALTYSRYLLKKYGNVPSVLEWEKNSKSTYDKRL 1214

Query: 3525 ISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQ 3346
            +SELE  RSLDGE G PLGVPAGVEDLDDFLRQKIS  R++R G+SMRDLVQR +EEAF 
Sbjct: 1215 LSELEPSRSLDGESGFPLGVPAGVEDLDDFLRQKISGNRITRAGMSMRDLVQRQIEEAFH 1274

Query: 3345 FFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXX 3166
            +F GKERK+F  G  K    EK DDGYQIAQQI +GLM+C RQTGGAAQEGDP       
Sbjct: 1275 YFFGKERKVFGAGIQKSSGHEKSDDGYQIAQQITMGLMECIRQTGGAAQEGDPSLVSSAV 1334

Query: 3165 XXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSR 3025
                  VG  IAK              S+T  L+ ARRILRIHI+CL LLKEA GERQSR
Sbjct: 1335 AAIVNNVGPTIAKMPDFSVTTNYSNASSATTSLNVARRILRIHISCLYLLKEAFGERQSR 1394

Query: 3024 VFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA---------------KTTXXX 2890
            VFEIALATEASSALA   APGKA R+QFQ+SP+  ++N                K+    
Sbjct: 1395 VFEIALATEASSALATAFAPGKASRSQFQMSPDDSNANVPNEMLNNSGRPGRVTKSAAAI 1454

Query: 2889 XXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEVS 2710
                          LERMVTV +LKEG+D+IQF+                 KVDN +E+ 
Sbjct: 1455 SALIVGAVIHGVTSLERMVTVLKLKEGLDVIQFIRSTKSTSNGNARMVPALKVDNSIEIY 1514

Query: 2709 VIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRFI 2530
            V WFR+L+GNCRT+SDGL+VELLGE SIVALSRMQR LPL LV PPAYSIFAFVIWR+ I
Sbjct: 1515 VHWFRLLIGNCRTVSDGLVVELLGEPSIVALSRMQRMLPLSLVFPPAYSIFAFVIWRQII 1574

Query: 2529 LNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAMLE 2350
            L+  +  REDINQLYQSL +AIGDAIKHLPFRDVCLRD++GFYD+V AD +D++ A+ML 
Sbjct: 1575 LSKELANREDINQLYQSLIMAIGDAIKHLPFRDVCLRDSQGFYDLVAADVSDADVASML- 1633

Query: 2349 LSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENETKL 2179
             +  DMH K+ AFVPLR RLFLNAIIDCKMP S   QDD NR+ G G S V++AE+E KL
Sbjct: 1634 -NALDMHSKSAAFVPLRGRLFLNAIIDCKMPESLCTQDDSNRLFGLGGSKVQHAESELKL 1692

Query: 2178 LDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAAS 1999
            LDKLV+V+DTLQPAKFHWQW+ELRLLLNEQAL+EKLE  D SLADAI S SP P+K AAS
Sbjct: 1693 LDKLVNVLDTLQPAKFHWQWVELRLLLNEQALVEKLETHDMSLADAIRSSSPGPEKAAAS 1752

Query: 1998 ENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSIR 1819
            ENENNFI IILTRLLVRPDAA LF+E+VHLFGR LEDSMLLQAKWFLGGQDVLFGRK+IR
Sbjct: 1753 ENENNFIVIILTRLLVRPDAASLFSELVHLFGRSLEDSMLLQAKWFLGGQDVLFGRKTIR 1812

Query: 1818 QRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLKS 1639
            QRL  IAESK LSTKAQF KPWGWC S  D  TN+ ++ KFE TSLEEGEVVEDGTD K 
Sbjct: 1813 QRLTIIAESKNLSTKAQFWKPWGWCRSGLDPVTNRGERKKFEVTSLEEGEVVEDGTDTKR 1872

Query: 1638 HGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQM 1459
             G+ S Q+L+ EG N+SQQ++TERALIELVLPCIDQ SD+SRNTFASDLIKQ+NNIE  +
Sbjct: 1873 SGKVSPQMLESEGFNISQQYMTERALIELVLPCIDQGSDESRNTFASDLIKQLNNIELLI 1932

Query: 1458 NAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRASM 1279
             A  RGASKQ G+ +SG+EG  NKGN+RK +RGGSPG+ RR TG  D    SPA LR SM
Sbjct: 1933 AA--RGASKQTGSASSGLEGPVNKGNSRKVIRGGSPGMNRRTTGAADSTLPSPAVLRTSM 1990

Query: 1278 SLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLLKR 1099
             LRLQ L+RLLPVIC D EPS RNMRH+ A VILRLLG+RVVHEDAD SF    SS  K 
Sbjct: 1991 LLRLQLLLRLLPVICTDGEPSGRNMRHMLACVILRLLGNRVVHEDADLSFYPMKSSQSK- 2049

Query: 1098 XXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFPVF 919
                          D  GES            LSS +PSWLK + +SKL  E +KD    
Sbjct: 2050 --VEVESTLEVASTDSPGESLFDRLLLVLHGLLSSSQPSWLKSRSASKLMNEFSKDSSGI 2107

Query: 918  DREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPSIS 739
            DRE+ E+LQN+LD MQLP +IRWRIQ+AMP+L PS RWSISCQ P+V  AA+ASLQPSI+
Sbjct: 2108 DRELVETLQNDLDRMQLPGSIRWRIQAAMPVLLPSARWSISCQLPTVPIAAVASLQPSIT 2167

Query: 738  FSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPSSS 559
             SGL  G     Q+NP  LART N V G++K LP+QQD DMEIDPWTLLEDG GS PSSS
Sbjct: 2168 ISGLYAGMP--PQKNPLPLARTTN-VPGRSKSLPLQQDNDMEIDPWTLLEDGTGSGPSSS 2224

Query: 558  NTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            N A +SGGDHANLRAS+WLKG VRVRRTDL YIGAVDDD+
Sbjct: 2225 NAAVVSGGDHANLRASAWLKGAVRVRRTDLTYIGAVDDDN 2264


>ref|XP_012083389.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Jatropha curcas]
          Length = 2266

 Score = 2279 bits (5905), Expect = 0.0
 Identities = 1216/1902 (63%), Positives = 1425/1902 (74%), Gaps = 38/1902 (1%)
 Frame = -3

Query: 6030 EPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSFI 5851
            E SP GSDLVDNSRRAYTTSAL+EMLRYLILAVPDTFVALDCFPLP  V+S+ VNDG+F 
Sbjct: 383  ELSPVGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVALDCFPLPQIVLSYTVNDGAFA 442

Query: 5850 SKVDEDAVK-MKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
             K  E+A K + N    VG L R+KG +AQYQS S    VSSIQKRADNLA AA PG   
Sbjct: 443  LKSSEEARKTIDNSAGAVGVL-RNKGFDAQYQSFSFNKVVSSIQKRADNLAKAACPGYLV 501

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
             ++AKAVQ LDKAL QGD+R AY FLFE+ CD  VDEGW  EV+PCLRSS+KWIGTV+LS
Sbjct: 502  HSVAKAVQALDKALSQGDIREAYNFLFENFCDGAVDEGWIEEVSPCLRSSLKWIGTVSLS 561

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
            F+CS+FFLCEWATCD+RDFR A P+ ++F+G+KD SQ+YIA RLL+L  RDMQ     KN
Sbjct: 562  FICSVFFLCEWATCDYRDFRAAPPNDVQFSGKKDVSQVYIASRLLRLKIRDMQSRSRRKN 621

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
            +   G    IKG  Q +NY G   +GN  E K N K+ + K +  SD+F+SPGPLHDI+V
Sbjct: 622  ERSLG----IKGLSQ-HNYVGRVPVGNGCENKGNTKNGNRKIRNLSDIFESPGPLHDIIV 676

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE Q GEG KRLQLLI EL +SGIFYP +YVRQLI+ GIMD +GP  DLDR KRH
Sbjct: 677  CWIDQHEVQKGEGLKRLQLLIVELIQSGIFYPHSYVRQLIISGIMDASGPAGDLDRRKRH 736

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSS-- 4783
             +ILKQLPG ++ D LEEARI E   L E +HVYSNERRL+L+G     ++ N  +S+  
Sbjct: 737  YQILKQLPGLFLHDILEEARIVEGSDLLEAMHVYSNERRLLLRGVLCE-QNQNLCRSNIL 795

Query: 4782 SKEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXX 4603
             ++Q+HHPTS+ +GASPAS+DQWK  QS    L+ K V   A+++ELKA+I         
Sbjct: 796  MRKQRHHPTSVKDGASPASIDQWKTIQSWPNVLASKKVKSNAEIDELKASISVLLQIPIL 855

Query: 4602 XXXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGF 4423
                           GSVKR   S  NK +L E +PGCE+C   KRQKLSEEKSS LQG 
Sbjct: 856  SPSSDTGLDDSQ---GSVKRVADSTCNKIDLVESTPGCEDCRKAKRQKLSEEKSSCLQGH 912

Query: 4422 SPNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGS 4246
            SP +SDDE+ WW+RKG KS +  KVDPPLK SKQ+++GRQK+VRKTQSLAQLAAARIEGS
Sbjct: 913  SP-VSDDEDTWWMRKGTKSLDLSKVDPPLKSSKQISKGRQKVVRKTQSLAQLAAARIEGS 971

Query: 4245 QGASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVIT 4069
            QGASTSHVCD+++ CPHHR G E E  KS DG+RT H GDIVSI K LK+LRFVEK+ IT
Sbjct: 972  QGASTSHVCDNKVGCPHHRNGTEAETLKSADGVRTLHSGDIVSIAKALKQLRFVEKRSIT 1031

Query: 4068 VWLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLV 3889
            VWL+TVV+QLVEE E+  AK SQ++R F    D+SS+RWKLGEDELSA+LYLMDV + LV
Sbjct: 1032 VWLVTVVKQLVEETERNIAKASQFTRTFVPADDRSSIRWKLGEDELSAVLYLMDVCNGLV 1091

Query: 3888 SAVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAA 3709
            SA + LLWLLPK++++ NST+ SGR + +L RN+ +  CEVGE+FL+S +RRYENILVAA
Sbjct: 1092 SAAKLLLWLLPKVVSNTNSTIHSGRNIAVLQRNMENHACEVGEAFLMSCLRRYENILVAA 1151

Query: 3708 DLIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKR 3529
            DLIP+ L+AA+ R A ++ASNGR+SGSA   Y+RYLL+K+ NVASV++WEKNFK TCDKR
Sbjct: 1152 DLIPEVLAAAIQRVAALLASNGRLSGSAVLTYSRYLLRKYGNVASVLEWEKNFKATCDKR 1211

Query: 3528 LISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAF 3349
            L+SELE  RSLDGEFG  LGVPAGVEDLDDF RQKI+  R+SR G+SM+D+VQR +++AF
Sbjct: 1212 LLSELEPSRSLDGEFGFALGVPAGVEDLDDFFRQKITGNRMSRAGISMKDIVQRQIDDAF 1271

Query: 3348 QFFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXX 3169
             +F GK+RK F  GT KGP  EK DDG+QIAQQI+ GL+DCFRQTGGAAQEGDP      
Sbjct: 1272 HYFFGKDRKFFGTGTQKGPGFEKSDDGHQIAQQIIRGLLDCFRQTGGAAQEGDPSLVSSA 1331

Query: 3168 XXXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQS 3028
                   VG  IAK             PS+   + +AR ILRIHI CLCLLKEALGERQS
Sbjct: 1332 VSAIVNNVGPTIAKMPDFSAVSNHSNSPSAMASMSFARCILRIHINCLCLLKEALGERQS 1391

Query: 3027 RVFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA---------------KTTXX 2893
            RVFEIALA EASSAL    APGKA R QFQLSPE  + N+               K+   
Sbjct: 1392 RVFEIALAAEASSALLMAFAPGKASRNQFQLSPEDPNMNSSNEIMSNSARSGRGTKSAAA 1451

Query: 2892 XXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEV 2713
                           LERMVTV RLKEG+D+IQF+                FK DN +EV
Sbjct: 1452 ISALIIGALIHGVTSLERMVTVLRLKEGLDVIQFIRSTKSNSNGNARSISAFKGDNTIEV 1511

Query: 2712 SVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRF 2533
             V  FR+L+GNCRT+ DGLIVELLGE+SIVALSRMQR LPL LV PPAYSIFAFVIWR+ 
Sbjct: 1512 YVHLFRLLIGNCRTLCDGLIVELLGESSIVALSRMQRMLPLALVFPPAYSIFAFVIWRQV 1571

Query: 2532 ILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAML 2353
            IL+ ++V RED+NQLY SL++AIGDAIKHLPFRDVCLRD++GFYD+V ADA+D++FAAM 
Sbjct: 1572 ILSKDLVNREDLNQLYLSLSMAIGDAIKHLPFRDVCLRDSQGFYDLVAADASDADFAAM- 1630

Query: 2352 ELSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENETK 2182
             L+G D+H K+ AFVPLR RLFLNAIIDCKMP    +QD+ NRVSG G S V++AE+ETK
Sbjct: 1631 -LNGLDVHSKSAAFVPLRGRLFLNAIIDCKMPHCVSTQDESNRVSGFGGSKVQHAESETK 1689

Query: 2181 LLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAA 2002
            LLDKLV+V+DTLQPAKFHWQW+ELRLLLNEQAL+EKLE  D SLADAI S SP  +K AA
Sbjct: 1690 LLDKLVNVLDTLQPAKFHWQWVELRLLLNEQALVEKLETHDMSLADAIRSSSPGLEKAAA 1749

Query: 2001 SENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSI 1822
            SENENNFI IILTRLLVRPDAAPLF+E+VHLFGR LEDSMLLQAKWFLGG DVLFGRK+I
Sbjct: 1750 SENENNFIVIILTRLLVRPDAAPLFSELVHLFGRSLEDSMLLQAKWFLGGLDVLFGRKTI 1809

Query: 1821 RQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLK 1642
            RQRL NIAESK LSTKAQF +PWGWC S  D+  ++ DK KFE TSLEEGEVV+D TD K
Sbjct: 1810 RQRLTNIAESKNLSTKAQFWRPWGWCKSGADLVMSRGDKKKFEVTSLEEGEVVDDSTDAK 1869

Query: 1641 SHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQ 1462
              G+  TQ+ + +  +++Q H+TERALIELVLPCIDQ SD+SRNTFASDLIKQ+ NIEQQ
Sbjct: 1870 KSGKVPTQIFETDSFSINQTHITERALIELVLPCIDQGSDESRNTFASDLIKQLINIEQQ 1929

Query: 1461 MNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPT-GVVDIVPASPAALRA 1285
            +NA  RGASKQAG+ +SG+EG  NKG+NRKA+RGGSPG+ RR   G  D    SPAALRA
Sbjct: 1930 INAFARGASKQAGSTSSGLEGPVNKGSNRKAIRGGSPGMNRRTAGGAADTALPSPAALRA 1989

Query: 1284 SMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLL 1105
            SMSLRLQ L+RLLP+ICAD EPS RNMR++ ASVILRLLG RVVHEDAD S S   SS  
Sbjct: 1990 SMSLRLQLLLRLLPIICADGEPSGRNMRYMLASVILRLLGHRVVHEDADLSLSPMQSSQS 2049

Query: 1104 KRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFP 925
            K               DLSGES            LS+ +PSWLK + +SKL  E +KD  
Sbjct: 2050 K---MELESTSEAASGDLSGESLFDRLLLVLHGLLSNSQPSWLKSRAASKLMNEFSKDSA 2106

Query: 924  VFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPS 745
              DR+V ESLQN+LDHMQLP +IR RIQ+AMPIL PSVRWSISCQ PSV  A++ASLQPS
Sbjct: 2107 GLDRDVVESLQNDLDHMQLPGSIRCRIQAAMPILLPSVRWSISCQLPSVPIASVASLQPS 2166

Query: 744  ISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPS 565
             + SGL+ GN    Q+NP  L RT  ++ GK K LP+QQD DMEIDPWTLLEDG GS  S
Sbjct: 2167 STISGLHTGNP--PQKNPLPLGRTTANMTGKLKSLPLQQDNDMEIDPWTLLEDGTGSGSS 2224

Query: 564  SSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSNTA I  GDHANLRASSWLKG VRVRRTDL YIGAVDDDS
Sbjct: 2225 SSNTAVIGSGDHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 2266


>gb|KDP28624.1| hypothetical protein JCGZ_14395 [Jatropha curcas]
          Length = 1922

 Score = 2279 bits (5905), Expect = 0.0
 Identities = 1216/1902 (63%), Positives = 1425/1902 (74%), Gaps = 38/1902 (1%)
 Frame = -3

Query: 6030 EPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSFI 5851
            E SP GSDLVDNSRRAYTTSAL+EMLRYLILAVPDTFVALDCFPLP  V+S+ VNDG+F 
Sbjct: 39   ELSPVGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVALDCFPLPQIVLSYTVNDGAFA 98

Query: 5850 SKVDEDAVK-MKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
             K  E+A K + N    VG L R+KG +AQYQS S    VSSIQKRADNLA AA PG   
Sbjct: 99   LKSSEEARKTIDNSAGAVGVL-RNKGFDAQYQSFSFNKVVSSIQKRADNLAKAACPGYLV 157

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
             ++AKAVQ LDKAL QGD+R AY FLFE+ CD  VDEGW  EV+PCLRSS+KWIGTV+LS
Sbjct: 158  HSVAKAVQALDKALSQGDIREAYNFLFENFCDGAVDEGWIEEVSPCLRSSLKWIGTVSLS 217

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
            F+CS+FFLCEWATCD+RDFR A P+ ++F+G+KD SQ+YIA RLL+L  RDMQ     KN
Sbjct: 218  FICSVFFLCEWATCDYRDFRAAPPNDVQFSGKKDVSQVYIASRLLRLKIRDMQSRSRRKN 277

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
            +   G    IKG  Q +NY G   +GN  E K N K+ + K +  SD+F+SPGPLHDI+V
Sbjct: 278  ERSLG----IKGLSQ-HNYVGRVPVGNGCENKGNTKNGNRKIRNLSDIFESPGPLHDIIV 332

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE Q GEG KRLQLLI EL +SGIFYP +YVRQLI+ GIMD +GP  DLDR KRH
Sbjct: 333  CWIDQHEVQKGEGLKRLQLLIVELIQSGIFYPHSYVRQLIISGIMDASGPAGDLDRRKRH 392

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSS-- 4783
             +ILKQLPG ++ D LEEARI E   L E +HVYSNERRL+L+G     ++ N  +S+  
Sbjct: 393  YQILKQLPGLFLHDILEEARIVEGSDLLEAMHVYSNERRLLLRGVLCE-QNQNLCRSNIL 451

Query: 4782 SKEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXX 4603
             ++Q+HHPTS+ +GASPAS+DQWK  QS    L+ K V   A+++ELKA+I         
Sbjct: 452  MRKQRHHPTSVKDGASPASIDQWKTIQSWPNVLASKKVKSNAEIDELKASISVLLQIPIL 511

Query: 4602 XXXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGF 4423
                           GSVKR   S  NK +L E +PGCE+C   KRQKLSEEKSS LQG 
Sbjct: 512  SPSSDTGLDDSQ---GSVKRVADSTCNKIDLVESTPGCEDCRKAKRQKLSEEKSSCLQGH 568

Query: 4422 SPNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGS 4246
            SP +SDDE+ WW+RKG KS +  KVDPPLK SKQ+++GRQK+VRKTQSLAQLAAARIEGS
Sbjct: 569  SP-VSDDEDTWWMRKGTKSLDLSKVDPPLKSSKQISKGRQKVVRKTQSLAQLAAARIEGS 627

Query: 4245 QGASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVIT 4069
            QGASTSHVCD+++ CPHHR G E E  KS DG+RT H GDIVSI K LK+LRFVEK+ IT
Sbjct: 628  QGASTSHVCDNKVGCPHHRNGTEAETLKSADGVRTLHSGDIVSIAKALKQLRFVEKRSIT 687

Query: 4068 VWLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLV 3889
            VWL+TVV+QLVEE E+  AK SQ++R F    D+SS+RWKLGEDELSA+LYLMDV + LV
Sbjct: 688  VWLVTVVKQLVEETERNIAKASQFTRTFVPADDRSSIRWKLGEDELSAVLYLMDVCNGLV 747

Query: 3888 SAVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAA 3709
            SA + LLWLLPK++++ NST+ SGR + +L RN+ +  CEVGE+FL+S +RRYENILVAA
Sbjct: 748  SAAKLLLWLLPKVVSNTNSTIHSGRNIAVLQRNMENHACEVGEAFLMSCLRRYENILVAA 807

Query: 3708 DLIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKR 3529
            DLIP+ L+AA+ R A ++ASNGR+SGSA   Y+RYLL+K+ NVASV++WEKNFK TCDKR
Sbjct: 808  DLIPEVLAAAIQRVAALLASNGRLSGSAVLTYSRYLLRKYGNVASVLEWEKNFKATCDKR 867

Query: 3528 LISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAF 3349
            L+SELE  RSLDGEFG  LGVPAGVEDLDDF RQKI+  R+SR G+SM+D+VQR +++AF
Sbjct: 868  LLSELEPSRSLDGEFGFALGVPAGVEDLDDFFRQKITGNRMSRAGISMKDIVQRQIDDAF 927

Query: 3348 QFFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXX 3169
             +F GK+RK F  GT KGP  EK DDG+QIAQQI+ GL+DCFRQTGGAAQEGDP      
Sbjct: 928  HYFFGKDRKFFGTGTQKGPGFEKSDDGHQIAQQIIRGLLDCFRQTGGAAQEGDPSLVSSA 987

Query: 3168 XXXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQS 3028
                   VG  IAK             PS+   + +AR ILRIHI CLCLLKEALGERQS
Sbjct: 988  VSAIVNNVGPTIAKMPDFSAVSNHSNSPSAMASMSFARCILRIHINCLCLLKEALGERQS 1047

Query: 3027 RVFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA---------------KTTXX 2893
            RVFEIALA EASSAL    APGKA R QFQLSPE  + N+               K+   
Sbjct: 1048 RVFEIALAAEASSALLMAFAPGKASRNQFQLSPEDPNMNSSNEIMSNSARSGRGTKSAAA 1107

Query: 2892 XXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEV 2713
                           LERMVTV RLKEG+D+IQF+                FK DN +EV
Sbjct: 1108 ISALIIGALIHGVTSLERMVTVLRLKEGLDVIQFIRSTKSNSNGNARSISAFKGDNTIEV 1167

Query: 2712 SVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRF 2533
             V  FR+L+GNCRT+ DGLIVELLGE+SIVALSRMQR LPL LV PPAYSIFAFVIWR+ 
Sbjct: 1168 YVHLFRLLIGNCRTLCDGLIVELLGESSIVALSRMQRMLPLALVFPPAYSIFAFVIWRQV 1227

Query: 2532 ILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAML 2353
            IL+ ++V RED+NQLY SL++AIGDAIKHLPFRDVCLRD++GFYD+V ADA+D++FAAM 
Sbjct: 1228 ILSKDLVNREDLNQLYLSLSMAIGDAIKHLPFRDVCLRDSQGFYDLVAADASDADFAAM- 1286

Query: 2352 ELSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENETK 2182
             L+G D+H K+ AFVPLR RLFLNAIIDCKMP    +QD+ NRVSG G S V++AE+ETK
Sbjct: 1287 -LNGLDVHSKSAAFVPLRGRLFLNAIIDCKMPHCVSTQDESNRVSGFGGSKVQHAESETK 1345

Query: 2181 LLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAA 2002
            LLDKLV+V+DTLQPAKFHWQW+ELRLLLNEQAL+EKLE  D SLADAI S SP  +K AA
Sbjct: 1346 LLDKLVNVLDTLQPAKFHWQWVELRLLLNEQALVEKLETHDMSLADAIRSSSPGLEKAAA 1405

Query: 2001 SENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSI 1822
            SENENNFI IILTRLLVRPDAAPLF+E+VHLFGR LEDSMLLQAKWFLGG DVLFGRK+I
Sbjct: 1406 SENENNFIVIILTRLLVRPDAAPLFSELVHLFGRSLEDSMLLQAKWFLGGLDVLFGRKTI 1465

Query: 1821 RQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLK 1642
            RQRL NIAESK LSTKAQF +PWGWC S  D+  ++ DK KFE TSLEEGEVV+D TD K
Sbjct: 1466 RQRLTNIAESKNLSTKAQFWRPWGWCKSGADLVMSRGDKKKFEVTSLEEGEVVDDSTDAK 1525

Query: 1641 SHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQ 1462
              G+  TQ+ + +  +++Q H+TERALIELVLPCIDQ SD+SRNTFASDLIKQ+ NIEQQ
Sbjct: 1526 KSGKVPTQIFETDSFSINQTHITERALIELVLPCIDQGSDESRNTFASDLIKQLINIEQQ 1585

Query: 1461 MNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPT-GVVDIVPASPAALRA 1285
            +NA  RGASKQAG+ +SG+EG  NKG+NRKA+RGGSPG+ RR   G  D    SPAALRA
Sbjct: 1586 INAFARGASKQAGSTSSGLEGPVNKGSNRKAIRGGSPGMNRRTAGGAADTALPSPAALRA 1645

Query: 1284 SMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLL 1105
            SMSLRLQ L+RLLP+ICAD EPS RNMR++ ASVILRLLG RVVHEDAD S S   SS  
Sbjct: 1646 SMSLRLQLLLRLLPIICADGEPSGRNMRYMLASVILRLLGHRVVHEDADLSLSPMQSSQS 1705

Query: 1104 KRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFP 925
            K               DLSGES            LS+ +PSWLK + +SKL  E +KD  
Sbjct: 1706 K---MELESTSEAASGDLSGESLFDRLLLVLHGLLSNSQPSWLKSRAASKLMNEFSKDSA 1762

Query: 924  VFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPS 745
              DR+V ESLQN+LDHMQLP +IR RIQ+AMPIL PSVRWSISCQ PSV  A++ASLQPS
Sbjct: 1763 GLDRDVVESLQNDLDHMQLPGSIRCRIQAAMPILLPSVRWSISCQLPSVPIASVASLQPS 1822

Query: 744  ISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPS 565
             + SGL+ GN    Q+NP  L RT  ++ GK K LP+QQD DMEIDPWTLLEDG GS  S
Sbjct: 1823 STISGLHTGNP--PQKNPLPLGRTTANMTGKLKSLPLQQDNDMEIDPWTLLEDGTGSGSS 1880

Query: 564  SSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSNTA I  GDHANLRASSWLKG VRVRRTDL YIGAVDDDS
Sbjct: 1881 SSNTAVIGSGDHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 1922


>ref|XP_007051802.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
            [Theobroma cacao] gi|508704063|gb|EOX95959.1| Mediator of
            RNA polymerase II transcription subunit 12 isoform 3
            [Theobroma cacao]
          Length = 2257

 Score = 2259 bits (5854), Expect = 0.0
 Identities = 1203/1905 (63%), Positives = 1410/1905 (74%), Gaps = 40/1905 (2%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYT SALVEMLRYLI AVPDTFVALDCFPLP CVVSH +NDG F
Sbjct: 381  REPSPGGSDLVDNSRRAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVSHALNDGGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K+K+   +   L R KG ++QYQSLS  H VS+IQKRADNLA     G P 
Sbjct: 441  LSKSSDDAGKIKHNSADAYVL-RGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPS 499

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++AKAVQ LDKAL+QGD+  AY+ +FE+LCD  V EGW AEV+PCLRSS+KWI TV LS
Sbjct: 500  QSVAKAVQTLDKALLQGDLMEAYKHIFENLCDGAVREGWVAEVSPCLRSSLKWIQTVNLS 559

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCDFRDFRTA P  LKFTGRKDFSQ+Y+AI+LLKL  R++Q     KN
Sbjct: 560  LICSVFFLCEWATCDFRDFRTAPPRDLKFTGRKDFSQMYLAIQLLKLKIRELQNP-EHKN 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
                GVNS  K   Q NNY      GN +E+K+ ++ VDG+N   SD+F SPGPLHDI+V
Sbjct: 619  GRASGVNSTAKNISQQNNYSRRNLSGNLFEVKSKVRVVDGRNSNSSDIFDSPGPLHDIIV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL + EL RSGIFYPQAYVRQLIV GI+D NGP++D DR KRH
Sbjct: 679  CWIDQHEGHKGEGGKRLQLFVLELIRSGIFYPQAYVRQLIVSGIIDTNGPVSDFDRRKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGF-HDHHKSPNSAKSSS 4780
             +ILKQLPG ++ D LEEARI     L E ++VYSNERRLVL G   D + + N+A  S+
Sbjct: 739  HRILKQLPGQFMCDVLEEARIAVGSELLEAVNVYSNERRLVLHGLLSDQYSNANNAHVSA 798

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            K+QK+H TS   GAS AS DQ K  QS+      K   R  DLEELKA+I          
Sbjct: 799  KKQKYHSTSGRNGASQASGDQRKTVQSS------KAFRREVDLEELKASISVLLQFPSLS 852

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GSVKRP+ S  NK +L E +PGCE+C  VKRQKLSEEKSSYLQ  S
Sbjct: 853  SASVDSGVDESQ--GSVKRPIGSTCNKMDLFEVTPGCEDCRRVKRQKLSEEKSSYLQVPS 910

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDDE+ WWVRKG K+ E FKVDPPLK +KQV+RGRQK VRKTQSLAQLAAARIEGSQ
Sbjct: 911  PIPSDDEDTWWVRKGPKNLEPFKVDPPLKSTKQVSRGRQKTVRKTQSLAQLAAARIEGSQ 970

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSHVCD++ISCPHHRT  E   K VDGIR  H GDI+SIGK LK+LRFVEK+++TVW
Sbjct: 971  GASTSHVCDNKISCPHHRTEVE-TLKPVDGIRITHSGDIISIGKGLKQLRFVEKRIVTVW 1029

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI+VVRQLVEE+EK+ AKV QY RPF    +KS +RWKLGEDELS ILYLMDVS DL SA
Sbjct: 1030 LISVVRQLVEESEKSVAKVGQYGRPFVVADEKSPLRWKLGEDELSTILYLMDVSCDLPSA 1089

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            V+FLLWLLPK++++P+ T+ SGR +LM+PRNV +  CEVGE++LLSS+RRYENIL+AADL
Sbjct: 1090 VKFLLWLLPKVISNPSPTIQSGRNILMVPRNVENHACEVGEAYLLSSLRRYENILIAADL 1149

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            IP+ L+A MHRAA +MASNGR++GS   V+ARYLLK++ N+ASV++WEKNFK TCD RL+
Sbjct: 1150 IPEALAATMHRAAAVMASNGRITGSGTLVFARYLLKRYGNIASVIEWEKNFKATCDNRLL 1209

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES ++ DGEFG PLGVPAG+ED DD+ RQK+S AR+SR+GLSMRD+VQRHV++   +
Sbjct: 1210 SELESGQAHDGEFGLPLGVPAGIEDPDDYYRQKLSGARLSRLGLSMRDMVQRHVDDVLHY 1269

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
            F GKERKLF     KGPA+EK DDGYQ+AQQI IGL+DC RQTGGAAQEGDP        
Sbjct: 1270 FLGKERKLFAANAPKGPAIEKGDDGYQVAQQIAIGLLDCIRQTGGAAQEGDPVLVSSAIS 1329

Query: 3162 XXXXXVGLFIAK-PSSTV------------PLDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK P  T              L++A+RILRIH+ CL LLKEALGERQSR 
Sbjct: 1330 AIVTNVGPALAKIPDFTGGSNYSNYQPPMNSLNFAKRILRIHLICLSLLKEALGERQSRA 1389

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FE+AL  EASSALA   AP K+ R QF L+ +  D+NA                   K  
Sbjct: 1390 FELALGIEASSALAVAFAPAKSSRGQFFLASDAPDTNANISGDNLNGSAKVTLGRTTKMV 1449

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             L+R+V+V RL+EG+D++QF+                FKVDN V
Sbjct: 1450 AAVSALVIGTVIHGVISLDRLVSVLRLREGLDVVQFVRSTKTSSNGNARSVGAFKVDNSV 1509

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            EV V WFR+ VGNCRT+ DGL++ELLGE S+VALSRMQR LP+ LV PPAY+IFAFVIW+
Sbjct: 1510 EVCVHWFRLFVGNCRTVCDGLVLELLGEQSVVALSRMQRLLPISLVFPPAYAIFAFVIWK 1569

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FILN+NI +REDI+QLYQSLT+AIGDAIKH+PFRDVC+RD+R FYDI+ AD  D+EFA 
Sbjct: 1570 PFILNSNIASREDIHQLYQSLTMAIGDAIKHIPFRDVCMRDSRAFYDILAADTTDAEFAG 1629

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENE 2188
            + EL+G     K+MAFVPLRARLFLNAIIDCKMP S   QDDGNRVSG  E     AE+E
Sbjct: 1630 LPELNG-----KSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSEYKALRAESE 1684

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            + LLDKLV  +DTLQPAKFHWQW+ELRLLLNEQALI+K + ++ SL DAI S SP+ ++ 
Sbjct: 1685 SNLLDKLVRALDTLQPAKFHWQWVELRLLLNEQALIDKTKNQEMSLVDAIRSSSPSSERA 1744

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
            + SENE   IEII TRLLVRPDAAPLF+E+VHLFG  LEDS+L+QAKWFLGGQDVL GRK
Sbjct: 1745 SPSENEKVLIEIIFTRLLVRPDAAPLFSELVHLFGMSLEDSVLMQAKWFLGGQDVLLGRK 1804

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            ++RQRLIN AE    S K QF KPWGW YS  D  TN+ +K K+E TSLEEGEV+E+GT+
Sbjct: 1805 TVRQRLINFAEINSRSMKTQFWKPWGWSYSGVDPVTNRGEKKKYEVTSLEEGEVIEEGTE 1864

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K + +GS+QV DVEG ++S QHVTE+A  ELVLPCIDQSSDDSRNTFASDLIKQ N IE
Sbjct: 1865 SKRYLKGSSQV-DVEGSSISLQHVTEKAFSELVLPCIDQSSDDSRNTFASDLIKQFNIIE 1923

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGV--VDIVPASPAA 1294
            QQ+N+VTRG SKQ GT TSGIEG+ NKGNNRK +RG SPGLARR T     + VP SPAA
Sbjct: 1924 QQINSVTRGVSKQTGTATSGIEGSTNKGNNRKGIRGSSPGLARRTTATASAESVPPSPAA 1983

Query: 1293 LRASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMS 1114
            LRASMSLRLQF++RLLP+ICAD EPS+RNMRH+ ASVILRLLGSRVVHED D SF+L   
Sbjct: 1984 LRASMSLRLQFIVRLLPIICADGEPSTRNMRHMLASVILRLLGSRVVHEDVDLSFNLVQ- 2042

Query: 1113 SLLKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTK 934
              LKR              +LSG+S            LSS +PSWL  KP+SK T+E   
Sbjct: 2043 --LKR---DMELMSSVASSELSGDSLFDRLLLVLHGLLSSSQPSWLGSKPASKHTSE--- 2094

Query: 933  DFPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASL 754
             F  FDRE  ESLQNELD MQLP+ IRWRIQ+AMPILFPS R  ISC PPSV   AL+ L
Sbjct: 2095 -FTGFDREAVESLQNELDSMQLPEMIRWRIQAAMPILFPSFRNLISCHPPSVPIGALSLL 2153

Query: 753  QPSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGS 574
            QPSI   G   GN N  QR    LAR AN++ GK+K +P+ Q+ DMEIDPWTLLEDGAGS
Sbjct: 2154 QPSIFVPGCYVGNLNAPQRQ-VPLARNANNILGKSKSMPLLQEYDMEIDPWTLLEDGAGS 2212

Query: 573  VPSSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
             PSS++T  I   DHANLRASSWLKG VRVRRTDL YIGAVDDDS
Sbjct: 2213 GPSSNSTVVIGSSDHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 2257


>ref|XP_007051800.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
            [Theobroma cacao] gi|508704061|gb|EOX95957.1| Mediator of
            RNA polymerase II transcription subunit 12 isoform 1
            [Theobroma cacao]
          Length = 2261

 Score = 2259 bits (5854), Expect = 0.0
 Identities = 1203/1905 (63%), Positives = 1410/1905 (74%), Gaps = 40/1905 (2%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYT SALVEMLRYLI AVPDTFVALDCFPLP CVVSH +NDG F
Sbjct: 385  REPSPGGSDLVDNSRRAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVSHALNDGGF 444

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K+K+   +   L R KG ++QYQSLS  H VS+IQKRADNLA     G P 
Sbjct: 445  LSKSSDDAGKIKHNSADAYVL-RGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPS 503

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++AKAVQ LDKAL+QGD+  AY+ +FE+LCD  V EGW AEV+PCLRSS+KWI TV LS
Sbjct: 504  QSVAKAVQTLDKALLQGDLMEAYKHIFENLCDGAVREGWVAEVSPCLRSSLKWIQTVNLS 563

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCDFRDFRTA P  LKFTGRKDFSQ+Y+AI+LLKL  R++Q     KN
Sbjct: 564  LICSVFFLCEWATCDFRDFRTAPPRDLKFTGRKDFSQMYLAIQLLKLKIRELQNP-EHKN 622

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
                GVNS  K   Q NNY      GN +E+K+ ++ VDG+N   SD+F SPGPLHDI+V
Sbjct: 623  GRASGVNSTAKNISQQNNYSRRNLSGNLFEVKSKVRVVDGRNSNSSDIFDSPGPLHDIIV 682

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL + EL RSGIFYPQAYVRQLIV GI+D NGP++D DR KRH
Sbjct: 683  CWIDQHEGHKGEGGKRLQLFVLELIRSGIFYPQAYVRQLIVSGIIDTNGPVSDFDRRKRH 742

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGF-HDHHKSPNSAKSSS 4780
             +ILKQLPG ++ D LEEARI     L E ++VYSNERRLVL G   D + + N+A  S+
Sbjct: 743  HRILKQLPGQFMCDVLEEARIAVGSELLEAVNVYSNERRLVLHGLLSDQYSNANNAHVSA 802

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            K+QK+H TS   GAS AS DQ K  QS+      K   R  DLEELKA+I          
Sbjct: 803  KKQKYHSTSGRNGASQASGDQRKTVQSS------KAFRREVDLEELKASISVLLQFPSLS 856

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GSVKRP+ S  NK +L E +PGCE+C  VKRQKLSEEKSSYLQ  S
Sbjct: 857  SASVDSGVDESQ--GSVKRPIGSTCNKMDLFEVTPGCEDCRRVKRQKLSEEKSSYLQVPS 914

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDDE+ WWVRKG K+ E FKVDPPLK +KQV+RGRQK VRKTQSLAQLAAARIEGSQ
Sbjct: 915  PIPSDDEDTWWVRKGPKNLEPFKVDPPLKSTKQVSRGRQKTVRKTQSLAQLAAARIEGSQ 974

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSHVCD++ISCPHHRT  E   K VDGIR  H GDI+SIGK LK+LRFVEK+++TVW
Sbjct: 975  GASTSHVCDNKISCPHHRTEVE-TLKPVDGIRITHSGDIISIGKGLKQLRFVEKRIVTVW 1033

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI+VVRQLVEE+EK+ AKV QY RPF    +KS +RWKLGEDELS ILYLMDVS DL SA
Sbjct: 1034 LISVVRQLVEESEKSVAKVGQYGRPFVVADEKSPLRWKLGEDELSTILYLMDVSCDLPSA 1093

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            V+FLLWLLPK++++P+ T+ SGR +LM+PRNV +  CEVGE++LLSS+RRYENIL+AADL
Sbjct: 1094 VKFLLWLLPKVISNPSPTIQSGRNILMVPRNVENHACEVGEAYLLSSLRRYENILIAADL 1153

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            IP+ L+A MHRAA +MASNGR++GS   V+ARYLLK++ N+ASV++WEKNFK TCD RL+
Sbjct: 1154 IPEALAATMHRAAAVMASNGRITGSGTLVFARYLLKRYGNIASVIEWEKNFKATCDNRLL 1213

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES ++ DGEFG PLGVPAG+ED DD+ RQK+S AR+SR+GLSMRD+VQRHV++   +
Sbjct: 1214 SELESGQAHDGEFGLPLGVPAGIEDPDDYYRQKLSGARLSRLGLSMRDMVQRHVDDVLHY 1273

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
            F GKERKLF     KGPA+EK DDGYQ+AQQI IGL+DC RQTGGAAQEGDP        
Sbjct: 1274 FLGKERKLFAANAPKGPAIEKGDDGYQVAQQIAIGLLDCIRQTGGAAQEGDPVLVSSAIS 1333

Query: 3162 XXXXXVGLFIAK-PSSTV------------PLDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK P  T              L++A+RILRIH+ CL LLKEALGERQSR 
Sbjct: 1334 AIVTNVGPALAKIPDFTGGSNYSNYQPPMNSLNFAKRILRIHLICLSLLKEALGERQSRA 1393

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FE+AL  EASSALA   AP K+ R QF L+ +  D+NA                   K  
Sbjct: 1394 FELALGIEASSALAVAFAPAKSSRGQFFLASDAPDTNANISGDNLNGSAKVTLGRTTKMV 1453

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             L+R+V+V RL+EG+D++QF+                FKVDN V
Sbjct: 1454 AAVSALVIGTVIHGVISLDRLVSVLRLREGLDVVQFVRSTKTSSNGNARSVGAFKVDNSV 1513

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            EV V WFR+ VGNCRT+ DGL++ELLGE S+VALSRMQR LP+ LV PPAY+IFAFVIW+
Sbjct: 1514 EVCVHWFRLFVGNCRTVCDGLVLELLGEQSVVALSRMQRLLPISLVFPPAYAIFAFVIWK 1573

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FILN+NI +REDI+QLYQSLT+AIGDAIKH+PFRDVC+RD+R FYDI+ AD  D+EFA 
Sbjct: 1574 PFILNSNIASREDIHQLYQSLTMAIGDAIKHIPFRDVCMRDSRAFYDILAADTTDAEFAG 1633

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENE 2188
            + EL+G     K+MAFVPLRARLFLNAIIDCKMP S   QDDGNRVSG  E     AE+E
Sbjct: 1634 LPELNG-----KSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSEYKALRAESE 1688

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            + LLDKLV  +DTLQPAKFHWQW+ELRLLLNEQALI+K + ++ SL DAI S SP+ ++ 
Sbjct: 1689 SNLLDKLVRALDTLQPAKFHWQWVELRLLLNEQALIDKTKNQEMSLVDAIRSSSPSSERA 1748

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
            + SENE   IEII TRLLVRPDAAPLF+E+VHLFG  LEDS+L+QAKWFLGGQDVL GRK
Sbjct: 1749 SPSENEKVLIEIIFTRLLVRPDAAPLFSELVHLFGMSLEDSVLMQAKWFLGGQDVLLGRK 1808

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            ++RQRLIN AE    S K QF KPWGW YS  D  TN+ +K K+E TSLEEGEV+E+GT+
Sbjct: 1809 TVRQRLINFAEINSRSMKTQFWKPWGWSYSGVDPVTNRGEKKKYEVTSLEEGEVIEEGTE 1868

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K + +GS+QV DVEG ++S QHVTE+A  ELVLPCIDQSSDDSRNTFASDLIKQ N IE
Sbjct: 1869 SKRYLKGSSQV-DVEGSSISLQHVTEKAFSELVLPCIDQSSDDSRNTFASDLIKQFNIIE 1927

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGV--VDIVPASPAA 1294
            QQ+N+VTRG SKQ GT TSGIEG+ NKGNNRK +RG SPGLARR T     + VP SPAA
Sbjct: 1928 QQINSVTRGVSKQTGTATSGIEGSTNKGNNRKGIRGSSPGLARRTTATASAESVPPSPAA 1987

Query: 1293 LRASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMS 1114
            LRASMSLRLQF++RLLP+ICAD EPS+RNMRH+ ASVILRLLGSRVVHED D SF+L   
Sbjct: 1988 LRASMSLRLQFIVRLLPIICADGEPSTRNMRHMLASVILRLLGSRVVHEDVDLSFNLVQ- 2046

Query: 1113 SLLKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTK 934
              LKR              +LSG+S            LSS +PSWL  KP+SK T+E   
Sbjct: 2047 --LKR---DMELMSSVASSELSGDSLFDRLLLVLHGLLSSSQPSWLGSKPASKHTSE--- 2098

Query: 933  DFPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASL 754
             F  FDRE  ESLQNELD MQLP+ IRWRIQ+AMPILFPS R  ISC PPSV   AL+ L
Sbjct: 2099 -FTGFDREAVESLQNELDSMQLPEMIRWRIQAAMPILFPSFRNLISCHPPSVPIGALSLL 2157

Query: 753  QPSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGS 574
            QPSI   G   GN N  QR    LAR AN++ GK+K +P+ Q+ DMEIDPWTLLEDGAGS
Sbjct: 2158 QPSIFVPGCYVGNLNAPQRQ-VPLARNANNILGKSKSMPLLQEYDMEIDPWTLLEDGAGS 2216

Query: 573  VPSSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
             PSS++T  I   DHANLRASSWLKG VRVRRTDL YIGAVDDDS
Sbjct: 2217 GPSSNSTVVIGSSDHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 2261


>ref|XP_007051801.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
            [Theobroma cacao] gi|508704062|gb|EOX95958.1| Mediator of
            RNA polymerase II transcription subunit 12 isoform 2
            [Theobroma cacao]
          Length = 2237

 Score = 2216 bits (5741), Expect = 0.0
 Identities = 1182/1884 (62%), Positives = 1390/1884 (73%), Gaps = 40/1884 (2%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYT SALVEMLRYLI AVPDTFVALDCFPLP CVVSH +NDG F
Sbjct: 381  REPSPGGSDLVDNSRRAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVSHALNDGGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K+K+   +   L R KG ++QYQSLS  H VS+IQKRADNLA     G P 
Sbjct: 441  LSKSSDDAGKIKHNSADAYVL-RGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPS 499

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++AKAVQ LDKAL+QGD+  AY+ +FE+LCD  V EGW AEV+PCLRSS+KWI TV LS
Sbjct: 500  QSVAKAVQTLDKALLQGDLMEAYKHIFENLCDGAVREGWVAEVSPCLRSSLKWIQTVNLS 559

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCDFRDFRTA P  LKFTGRKDFSQ+Y+AI+LLKL  R++Q     KN
Sbjct: 560  LICSVFFLCEWATCDFRDFRTAPPRDLKFTGRKDFSQMYLAIQLLKLKIRELQNP-EHKN 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
                GVNS  K   Q NNY      GN +E+K+ ++ VDG+N   SD+F SPGPLHDI+V
Sbjct: 619  GRASGVNSTAKNISQQNNYSRRNLSGNLFEVKSKVRVVDGRNSNSSDIFDSPGPLHDIIV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL + EL RSGIFYPQAYVRQLIV GI+D NGP++D DR KRH
Sbjct: 679  CWIDQHEGHKGEGGKRLQLFVLELIRSGIFYPQAYVRQLIVSGIIDTNGPVSDFDRRKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGF-HDHHKSPNSAKSSS 4780
             +ILKQLPG ++ D LEEARI     L E ++VYSNERRLVL G   D + + N+A  S+
Sbjct: 739  HRILKQLPGQFMCDVLEEARIAVGSELLEAVNVYSNERRLVLHGLLSDQYSNANNAHVSA 798

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            K+QK+H TS   GAS AS DQ K  QS+      K   R  DLEELKA+I          
Sbjct: 799  KKQKYHSTSGRNGASQASGDQRKTVQSS------KAFRREVDLEELKASISVLLQFPSLS 852

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GSVKRP+ S  NK +L E +PGCE+C  VKRQKLSEEKSSYLQ  S
Sbjct: 853  SASVDSGVDESQ--GSVKRPIGSTCNKMDLFEVTPGCEDCRRVKRQKLSEEKSSYLQVPS 910

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDDE+ WWVRKG K+ E FKVDPPLK +KQV+RGRQK VRKTQSLAQLAAARIEGSQ
Sbjct: 911  PIPSDDEDTWWVRKGPKNLEPFKVDPPLKSTKQVSRGRQKTVRKTQSLAQLAAARIEGSQ 970

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSHVCD++ISCPHHRT  E   K VDGIR  H GDI+SIGK LK+LRFVEK+++TVW
Sbjct: 971  GASTSHVCDNKISCPHHRTEVE-TLKPVDGIRITHSGDIISIGKGLKQLRFVEKRIVTVW 1029

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI+VVRQLVEE+EK+ AKV QY RPF    +KS +RWKLGEDELS ILYLMDVS DL SA
Sbjct: 1030 LISVVRQLVEESEKSVAKVGQYGRPFVVADEKSPLRWKLGEDELSTILYLMDVSCDLPSA 1089

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            V+FLLWLLPK++++P+ T+ SGR +LM+PRNV +  CEVGE++LLSS+RRYENIL+AADL
Sbjct: 1090 VKFLLWLLPKVISNPSPTIQSGRNILMVPRNVENHACEVGEAYLLSSLRRYENILIAADL 1149

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            IP+ L+A MHRAA +MASNGR++GS   V+ARYLLK++ N+ASV++WEKNFK TCD RL+
Sbjct: 1150 IPEALAATMHRAAAVMASNGRITGSGTLVFARYLLKRYGNIASVIEWEKNFKATCDNRLL 1209

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES ++ DGEFG PLGVPAG+ED DD+ RQK+S AR+SR+GLSMRD+VQRHV++   +
Sbjct: 1210 SELESGQAHDGEFGLPLGVPAGIEDPDDYYRQKLSGARLSRLGLSMRDMVQRHVDDVLHY 1269

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
            F GKERKLF     KGPA+EK DDGYQ+AQQI IGL+DC RQTGGAAQEGDP        
Sbjct: 1270 FLGKERKLFAANAPKGPAIEKGDDGYQVAQQIAIGLLDCIRQTGGAAQEGDPVLVSSAIS 1329

Query: 3162 XXXXXVGLFIAK-PSSTV------------PLDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK P  T              L++A+RILRIH+ CL LLKEALGERQSR 
Sbjct: 1330 AIVTNVGPALAKIPDFTGGSNYSNYQPPMNSLNFAKRILRIHLICLSLLKEALGERQSRA 1389

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FE+AL  EASSALA   AP K+ R QF L+ +  D+NA                   K  
Sbjct: 1390 FELALGIEASSALAVAFAPAKSSRGQFFLASDAPDTNANISGDNLNGSAKVTLGRTTKMV 1449

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             L+R+V+V RL+EG+D++QF+                FKVDN V
Sbjct: 1450 AAVSALVIGTVIHGVISLDRLVSVLRLREGLDVVQFVRSTKTSSNGNARSVGAFKVDNSV 1509

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            EV V WFR+ VGNCRT+ DGL++ELLGE S+VALSRMQR LP+ LV PPAY+IFAFVIW+
Sbjct: 1510 EVCVHWFRLFVGNCRTVCDGLVLELLGEQSVVALSRMQRLLPISLVFPPAYAIFAFVIWK 1569

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FILN+NI +REDI+QLYQSLT+AIGDAIKH+PFRDVC+RD+R FYDI+ AD  D+EFA 
Sbjct: 1570 PFILNSNIASREDIHQLYQSLTMAIGDAIKHIPFRDVCMRDSRAFYDILAADTTDAEFAG 1629

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENE 2188
            + EL+G     K+MAFVPLRARLFLNAIIDCKMP S   QDDGNRVSG  E     AE+E
Sbjct: 1630 LPELNG-----KSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSEYKALRAESE 1684

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            + LLDKLV  +DTLQPAKFHWQW+ELRLLLNEQALI+K + ++ SL DAI S SP+ ++ 
Sbjct: 1685 SNLLDKLVRALDTLQPAKFHWQWVELRLLLNEQALIDKTKNQEMSLVDAIRSSSPSSERA 1744

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
            + SENE   IEII TRLLVRPDAAPLF+E+VHLFG  LEDS+L+QAKWFLGGQDVL GRK
Sbjct: 1745 SPSENEKVLIEIIFTRLLVRPDAAPLFSELVHLFGMSLEDSVLMQAKWFLGGQDVLLGRK 1804

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            ++RQRLIN AE    S K QF KPWGW YS  D  TN+ +K K+E TSLEEGEV+E+GT+
Sbjct: 1805 TVRQRLINFAEINSRSMKTQFWKPWGWSYSGVDPVTNRGEKKKYEVTSLEEGEVIEEGTE 1864

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K + +GS+QV DVEG ++S QHVTE+A  ELVLPCIDQSSDDSRNTFASDLIKQ N IE
Sbjct: 1865 SKRYLKGSSQV-DVEGSSISLQHVTEKAFSELVLPCIDQSSDDSRNTFASDLIKQFNIIE 1923

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGV--VDIVPASPAA 1294
            QQ+N+VTRG SKQ GT TSGIEG+ NKGNNRK +RG SPGLARR T     + VP SPAA
Sbjct: 1924 QQINSVTRGVSKQTGTATSGIEGSTNKGNNRKGIRGSSPGLARRTTATASAESVPPSPAA 1983

Query: 1293 LRASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMS 1114
            LRASMSLRLQF++RLLP+ICAD EPS+RNMRH+ ASVILRLLGSRVVHED D SF+L   
Sbjct: 1984 LRASMSLRLQFIVRLLPIICADGEPSTRNMRHMLASVILRLLGSRVVHEDVDLSFNLVQ- 2042

Query: 1113 SLLKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTK 934
              LKR              +LSG+S            LSS +PSWL  KP+SK T+E   
Sbjct: 2043 --LKR---DMELMSSVASSELSGDSLFDRLLLVLHGLLSSSQPSWLGSKPASKHTSE--- 2094

Query: 933  DFPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASL 754
             F  FDRE  ESLQNELD MQLP+ IRWRIQ+AMPILFPS R  ISC PPSV   AL+ L
Sbjct: 2095 -FTGFDREAVESLQNELDSMQLPEMIRWRIQAAMPILFPSFRNLISCHPPSVPIGALSLL 2153

Query: 753  QPSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGS 574
            QPSI   G   GN N  QR    LAR AN++ GK+K +P+ Q+ DMEIDPWTLLEDGAGS
Sbjct: 2154 QPSIFVPGCYVGNLNAPQRQ-VPLARNANNILGKSKSMPLLQEYDMEIDPWTLLEDGAGS 2212

Query: 573  VPSSSNTATISGGDHANLRASSWL 502
             PSS++T  I   DHANLRAS+ L
Sbjct: 2213 GPSSNSTVVIGSSDHANLRASNVL 2236


>ref|XP_009629491.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Nicotiana tomentosiformis]
            gi|697150567|ref|XP_009629492.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Nicotiana
            tomentosiformis] gi|697150569|ref|XP_009629493.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 [Nicotiana tomentosiformis]
            gi|697150571|ref|XP_009629494.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Nicotiana
            tomentosiformis]
          Length = 2268

 Score = 2210 bits (5727), Expect = 0.0
 Identities = 1176/1903 (61%), Positives = 1399/1903 (73%), Gaps = 38/1903 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            QEPSPGGSDLVDNSRRAYT +ALVEMLRYL+LAVPDTFVALDCFP+PPCV+++VV DGS 
Sbjct: 379  QEPSPGGSDLVDNSRRAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMNNVVTDGSL 438

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
             SKV EDA K+KNG  EV    RDKG E +  S SI   VSSIQKRA NLAMAARPG+PG
Sbjct: 439  YSKVTEDARKVKNGPFEVAYFLRDKGPEVRSDSYSISRVVSSIQKRAQNLAMAARPGHPG 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCDC-VDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +N+AKA+  LDKAL  GD+R AY+FL E++ D  +D+ W AEV+ CLRSS+K+I  VTLS
Sbjct: 499  QNVAKALHALDKALAHGDLREAYKFLLENVHDSSIDDCWFAEVSSCLRSSLKYIRGVTLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FF+CEWATCDFRDFR A PHG+KFTGRKDFS +YIA+RLLKL  R+   S   + 
Sbjct: 559  SICSVFFICEWATCDFRDFRYAPPHGIKFTGRKDFSAIYIAVRLLKLKMREAGLSSRLRE 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
              +   +     PGQ+ NY G +      E     +   GK  +F  +F SP PLHDI+V
Sbjct: 619  HKIVKNDYLRTDPGQLTNYSGRSPGSGASEPLCYKRRASGKCGDFLGMFDSPCPLHDILV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE QN EGFKRLQLLI EL R+GIFYPQAYVRQLIV G+MD NGP++D  + KRH
Sbjct: 679  CWIDQHEVQNTEGFKRLQLLIIELIRAGIFYPQAYVRQLIVSGLMDGNGPISDPMKQKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSK 4777
            CKILK LPG YV+DALEEARI E  +LSEV++VY NER+LVL G  D    P S    S 
Sbjct: 739  CKILKHLPGQYVQDALEEARIAESHVLSEVMNVYCNERKLVLHGKID----PYSTTCGSS 794

Query: 4776 EQKHHPT-SMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
              KH P  +  E  S  SVDQ ++ +S S  LS K   RGA+LEELK +I          
Sbjct: 795  YHKHKPRPNSGESLSVPSVDQLRSSESGSFRLS-KDAGRGAELEELKGSITTLLQLPSSS 853

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                           S K+ V+S SN  +  EG+PGCEEC   K+ K+SEEKSSY Q + 
Sbjct: 854  STDTGVDESQV----SFKKAVVSGSNGMDNSEGTPGCEECRRAKKLKISEEKSSYSQIYP 909

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
             N SDDEE WW+RKG KS ESF+ +PP KP+K  +RGRQKIVRKTQSLAQLAAARIEGSQ
Sbjct: 910  LNPSDDEETWWMRKGQKSIESFRAEPPPKPAKSASRGRQKIVRKTQSLAQLAAARIEGSQ 969

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITV 4066
            GASTSHVCDS+ISCPHHR+G EG   KS DG R  + GD+VSIGK+LK+LRF+EK+ ITV
Sbjct: 970  GASTSHVCDSKISCPHHRSGIEGIVPKSADGTRMPN-GDVVSIGKVLKRLRFMEKRTITV 1028

Query: 4065 WLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVS 3886
            WLI +V+QLVEE+EKT  KV QY RPF A  ++  VRWKLGEDELSA+LYL+D  D+LV 
Sbjct: 1029 WLIGIVKQLVEESEKTVTKVGQYGRPFSAADERGCVRWKLGEDELSAVLYLIDSCDELVL 1088

Query: 3885 AVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAAD 3706
            A RFLLWLLPK+L S ++TV   R +L +P+N  + +CEVGE++LLSS+RRYE+I+VAAD
Sbjct: 1089 AARFLLWLLPKVLGSCSATVHGSRNILTIPKNAENNVCEVGEAYLLSSMRRYESIIVAAD 1148

Query: 3705 LIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRL 3526
            LIP+TLS  M RA  I+ SNGRVSGS A +YARYLLKK+ +V SV +WEK  K+T DKRL
Sbjct: 1149 LIPETLSVVMRRAQAILTSNGRVSGSPAVIYARYLLKKYGSVGSVTEWEKTVKSTFDKRL 1208

Query: 3525 ISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQ 3346
             SE+ES R LDGEFG PLGVP GV+D DD+ RQKI+  RVSRVGLSMRD+VQ+ V+EA  
Sbjct: 1209 ASEVESGRLLDGEFGFPLGVPVGVQDPDDYFRQKITGVRVSRVGLSMRDIVQKKVDEAVN 1268

Query: 3345 FFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXX 3166
            +F GK+RKLF P + K P  +KW+D YQI QQIV+GLMDC RQTGGAAQEGDP       
Sbjct: 1269 YFYGKDRKLFGPNSGKIPGFQKWEDVYQIGQQIVMGLMDCMRQTGGAAQEGDPTLVSSAI 1328

Query: 3165 XXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSR 3025
                  +G  IAK              S++  L +AR ILRIH+ CLC+LKEALGERQSR
Sbjct: 1329 SAIVCNIGQVIAKIPDLSASNNHLSFSSTSASLHFARCILRIHVICLCILKEALGERQSR 1388

Query: 3024 VFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSN-----------------AKTTX 2896
            VFE+ALATE SSALA V APGKAPR+QFQLSPE +DSN                 AK + 
Sbjct: 1389 VFEVALATETSSALAPVFAPGKAPRSQFQLSPELNDSNPSSDILNNSSRVALGRAAKISA 1448

Query: 2895 XXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVE 2716
                            LERMV++FRLK+G+D++ F+                 K D+L E
Sbjct: 1449 AVSALVIGAILQGVASLERMVSLFRLKDGLDVVHFVRSMRSNSNGNARSVGTLKADSLAE 1508

Query: 2715 VSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRR 2536
            VSV WFRVLVGNCRT+SDG IV+LLGEASI+AL RMQR LPL LV PPAYS+FAFV+WR 
Sbjct: 1509 VSVHWFRVLVGNCRTVSDGFIVDLLGEASILALCRMQRMLPLNLVFPPAYSMFAFVLWRP 1568

Query: 2535 FILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAM 2356
             ILNA+  TR+++ QL+ SL LA GD IKHLPFR+VCLRDT   YD++ AD  DS+FA++
Sbjct: 1569 LILNASSGTRDEVQQLHHSLLLAFGDVIKHLPFREVCLRDTHSLYDLIAADTVDSDFASL 1628

Query: 2355 LELSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENET 2185
            LE SG D+  KA AFVPLRARLFLNA+IDC++P   + QDDGN+V  QGES    AENET
Sbjct: 1629 LEASGVDLRTKASAFVPLRARLFLNALIDCRIPQPIVKQDDGNQVGVQGESKFHGAENET 1688

Query: 2184 KLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTA 2005
            KLLDKLV+++DTLQPAKFHWQWIELRLLLNEQA+IEKLE  D SL +A+ +LSPN DK +
Sbjct: 1689 KLLDKLVYILDTLQPAKFHWQWIELRLLLNEQAVIEKLEGHDLSLVEALRALSPNTDKAS 1748

Query: 2004 ASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKS 1825
             SENE+N IE+ILTRLLVRPDAAPLF+EVVHL GR LEDSMLLQAKWFLGG DVLFGRKS
Sbjct: 1749 VSENESNIIEMILTRLLVRPDAAPLFSEVVHLLGRSLEDSMLLQAKWFLGGHDVLFGRKS 1808

Query: 1824 IRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDL 1645
            +RQRLINIA SKGLST+AQ+ KPWGWC SN D  T+K ++ K E +S+EEGEVV++GT L
Sbjct: 1809 VRQRLINIAVSKGLSTRAQYWKPWGWCPSNSDPTTSKGERFKSEVSSIEEGEVVDEGTTL 1868

Query: 1644 KSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQ 1465
            K   +GS   +DVEG  V QQHVTERAL++L+LPC+DQ+SDDSR+TFASD+IKQMN+IEQ
Sbjct: 1869 KRPVKGSGHTVDVEGFLVRQQHVTERALVDLILPCLDQASDDSRSTFASDMIKQMNHIEQ 1928

Query: 1464 QMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRA 1285
            Q+NAVTR ASK AGT+ SGIE    K ++RK  RG SPGLARR +G  + VP SP ALRA
Sbjct: 1929 QINAVTREASKPAGTIASGIESPTTK-SSRKGTRGSSPGLARRASGPAETVPPSPVALRA 1987

Query: 1284 SMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLL 1105
            S+SLRLQF++RL P+I ADREPS RNMR++ ASVILR LGSR+VHEDA   F+   SS  
Sbjct: 1988 SLSLRLQFILRLFPIIYADREPSGRNMRYMLASVILRTLGSRIVHEDASHFFNQAYSS-- 2045

Query: 1104 KRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFP 925
            KR             V +S ES            LSS++P WLK K SSK ++E +KD+ 
Sbjct: 2046 KRELDSLVEASSTASVVMSLESLFDRLLLLLHGLLSSHQPRWLKGKSSSKSSSESSKDYS 2105

Query: 924  VFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPS 745
             F+RE AE+LQNELD MQLP+ +RWRIQSAMPILFPSVRWSISCQPPSV+PAAL+SL PS
Sbjct: 2106 AFEREGAENLQNELDRMQLPETVRWRIQSAMPILFPSVRWSISCQPPSVAPAALSSLLPS 2165

Query: 744  ISFSGLNPGN-SNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVP 568
               S L+  N SN  QR P SL RTA SV+GK K +  QQ+ D+E+DPW LLEDGAGS  
Sbjct: 2166 NPISVLHSSNGSNQTQRTPVSLLRTATSVSGKAKHVSSQQENDLEVDPWILLEDGAGSSQ 2225

Query: 567  SSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSSN+  + G D+ANL+AS+WLKG VRVRRTDL YIGAVDDDS
Sbjct: 2226 SSSNSTLVGGSDNANLKASNWLKGTVRVRRTDLTYIGAVDDDS 2268


>ref|XP_009757489.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Nicotiana sylvestris] gi|698521357|ref|XP_009757490.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 [Nicotiana sylvestris]
            gi|698521359|ref|XP_009757491.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Nicotiana
            sylvestris] gi|698521361|ref|XP_009757492.1| PREDICTED:
            mediator of RNA polymerase II transcription subunit 12
            [Nicotiana sylvestris]
          Length = 2268

 Score = 2204 bits (5712), Expect = 0.0
 Identities = 1170/1903 (61%), Positives = 1395/1903 (73%), Gaps = 38/1903 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            QEPSPGGSDLVDNSRRAYT +AL EMLRYL+LAVPDTFVALDCFP+PPCV+++VV DGS 
Sbjct: 379  QEPSPGGSDLVDNSRRAYTMAALAEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSL 438

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
             SKV EDA K+KNG  EV    RDKG E +  S SI   VSSIQKRA NLAMAARPG+PG
Sbjct: 439  YSKVTEDARKVKNGPFEVAYFLRDKGPEVRSDSYSISRVVSSIQKRAQNLAMAARPGHPG 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCDC-VDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +N+AKA+  LDKAL  GD+R AY+FL E++ D  +D+ W AEV+ CLRSS+K+I +VTLS
Sbjct: 499  QNVAKALHALDKALAHGDLREAYKFLLENVHDSSIDDCWFAEVSSCLRSSLKYIRSVTLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FF+CEWATCDFRDFR A P G+KFTGRKDFS +YIA+RLLKL  R+   S   + 
Sbjct: 559  SICSVFFICEWATCDFRDFRYAPPRGIKFTGRKDFSAIYIAVRLLKLKMREAGLSSRLRE 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
              +   +     PGQ+ NY G +      E     +   GK  +F  +F SP PLHDI+V
Sbjct: 619  HKIVKNDYLRTDPGQLTNYSGRSPGSGASEPLCYKRCASGKCGDFLGMFDSPSPLHDILV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE QN EGFKRLQLLI EL R+GIFYPQAYVRQLIV G+MD NGP++D  + KRH
Sbjct: 679  CWIDQHEVQNTEGFKRLQLLIIELIRAGIFYPQAYVRQLIVSGLMDGNGPISDPTKQKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSK 4777
            CKILK LPG YV+DALEEARI E  +LSEV++VY NER+LVL G  D    P S    S 
Sbjct: 739  CKILKHLPGQYVQDALEEARIAESHVLSEVMNVYCNERKLVLHGKID----PYSTTCGSS 794

Query: 4776 EQKHHPT-SMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
              KH P  +  E  S  S+DQ ++ +S S  LS K V RGA+LEELK +I          
Sbjct: 795  YHKHKPRPNSGESLSAPSIDQLRSSESGSFQLS-KVVGRGAELEELKGSITTLLQLPSSS 853

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                           S K+ V+S SN  +  EG+PGCEEC   K+QK+SEEKSSY Q + 
Sbjct: 854  STDTGVDETQV----SFKKAVVSGSNGMDNSEGTPGCEECRRAKKQKISEEKSSYSQIYP 909

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
             N SDDEE WW+RKG KS ESF+ +PP KP+K  ++GRQK+VRKTQSLAQLAAARIEGSQ
Sbjct: 910  LNPSDDEETWWMRKGQKSIESFRAEPPPKPAKSASKGRQKVVRKTQSLAQLAAARIEGSQ 969

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITV 4066
            GASTSHVCDS+ISCPHHR+G EG A KS DG R  + GD+VSIGK+LK LRF+EK+ ITV
Sbjct: 970  GASTSHVCDSKISCPHHRSGIEGIAPKSADGTRMPN-GDVVSIGKVLKGLRFMEKRTITV 1028

Query: 4065 WLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVS 3886
            WL+ +V+QLVEE+EKT  KV QY RPF A  ++  VRWKLGEDELSA+LYL+D  D+ V 
Sbjct: 1029 WLVGIVKQLVEESEKTVTKVGQYGRPFSAADERGFVRWKLGEDELSAVLYLIDSCDEFVL 1088

Query: 3885 AVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAAD 3706
            A  FLLWLLPK+L S ++TV   R +L +P+N  + +CEVGE++LLSS+RRYE+I+VAAD
Sbjct: 1089 AAMFLLWLLPKVLGSCSATVHGSRNILTIPKNAENNVCEVGEAYLLSSMRRYESIIVAAD 1148

Query: 3705 LIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRL 3526
            LIP+TLS  M RA  I+ SNGRVSGS   +YARYLLKK+ +V SV +WEK  K+T DKRL
Sbjct: 1149 LIPETLSVVMRRAQAILTSNGRVSGSPTVIYARYLLKKYGSVGSVTEWEKTVKSTFDKRL 1208

Query: 3525 ISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQ 3346
             SE+ES R LDGEFG PLGVP GV+D DD+ RQKI+  RVSRVGLSMRD+VQ+ V+EA  
Sbjct: 1209 ASEVESGRLLDGEFGYPLGVPVGVQDPDDYFRQKITGVRVSRVGLSMRDIVQKKVDEAVN 1268

Query: 3345 FFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXX 3166
            +F GK+RKLF P + K P  +KW+D YQI QQIV+GLMDC RQTGGAAQEGDP       
Sbjct: 1269 YFYGKDRKLFGPNSGKIPGFQKWEDVYQIGQQIVMGLMDCMRQTGGAAQEGDPTLVSSAI 1328

Query: 3165 XXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSR 3025
                  +G  IAK              S++  L +AR ILRIH+ CLC+LKEALGERQSR
Sbjct: 1329 SAIVCNIGQVIAKIPDLTASNNHLSFSSTSASLHFARCILRIHVICLCILKEALGERQSR 1388

Query: 3024 VFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSN-----------------AKTTX 2896
            VFE+ALATE SSALA V APGKAPR+QFQLSPE +DSN                 AK + 
Sbjct: 1389 VFEVALATETSSALAPVFAPGKAPRSQFQLSPELNDSNPSSDILNNSSRVALGRAAKISA 1448

Query: 2895 XXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVE 2716
                            LERMV++FRLK+G+D++ FM                 K D+L E
Sbjct: 1449 AVSALVIGAILQGVASLERMVSLFRLKDGLDVVHFMRSMRSNSNGNARSVGTLKADSLAE 1508

Query: 2715 VSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRR 2536
            VSV WFRVLVGNCRT+SDG IV+LLGEASI+AL RMQR LPL LV PPA+S+FAFV+WR 
Sbjct: 1509 VSVHWFRVLVGNCRTVSDGFIVDLLGEASILALCRMQRMLPLNLVFPPAFSMFAFVLWRP 1568

Query: 2535 FILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAM 2356
             ILNA+  TR+++ QL+ SL LA GD IKHLPFR+VCLRDT   YD++ AD  DS+FA++
Sbjct: 1569 LILNASSGTRDEVQQLHHSLLLAFGDVIKHLPFREVCLRDTHSLYDLIAADTVDSDFASL 1628

Query: 2355 LELSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENET 2185
            LE SG D+  K  AFVPLRARLFLNA+IDC++P   + QDDGN+V  QGES    AENET
Sbjct: 1629 LEASGVDLRTKTSAFVPLRARLFLNALIDCRIPQPIVKQDDGNQVGVQGESKFHGAENET 1688

Query: 2184 KLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTA 2005
            KLLDKLV+++DTLQPAKFHWQWIELRLLLNEQA+IEKLE  D SL +A+ SLSPN DK +
Sbjct: 1689 KLLDKLVYILDTLQPAKFHWQWIELRLLLNEQAVIEKLEGHDLSLVEALRSLSPNTDKAS 1748

Query: 2004 ASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKS 1825
             SENE+N IE+ILTRLLVRPDAAPLF+EVVHL GR LEDSMLLQAKWFLGG DVLFGRKS
Sbjct: 1749 VSENESNIIEMILTRLLVRPDAAPLFSEVVHLLGRSLEDSMLLQAKWFLGGHDVLFGRKS 1808

Query: 1824 IRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDL 1645
            +RQRLINIA SKGLST+AQ+ KPWGWC SN D  T+K +K K E +S+EEGEVV++GT L
Sbjct: 1809 VRQRLINIAVSKGLSTRAQYWKPWGWCPSNSDPTTSKGEKFKSEVSSIEEGEVVDEGTTL 1868

Query: 1644 KSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQ 1465
            K   +GS   +DVEG  V QQHVTERAL++L+LPC+DQ+SDDSR+TFASD+IKQMN+IEQ
Sbjct: 1869 KRPVKGSGHTVDVEGFLVRQQHVTERALVDLILPCLDQASDDSRSTFASDMIKQMNHIEQ 1928

Query: 1464 QMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRA 1285
            Q+NAVTR ASK AGT+ SGIE    K ++RK  RG SPGLARR +G  + VP SP ALRA
Sbjct: 1929 QINAVTREASKPAGTIASGIESPTTK-SSRKGTRGSSPGLARRASGPAETVPPSPVALRA 1987

Query: 1284 SMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLL 1105
            S+SLRLQF++RL P+I ADREPS RNMR++ ASVILR LGSR+VHEDA   F+   SS  
Sbjct: 1988 SLSLRLQFILRLFPIIYADREPSGRNMRYMLASVILRTLGSRIVHEDASHFFNQAYSS-- 2045

Query: 1104 KRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFP 925
            KR             V +S ES            LSS++P WLK K SSK ++E +KD+ 
Sbjct: 2046 KRELDSLVEASSTASVVMSLESLFDRLLLLLHGLLSSHQPRWLKGKSSSKSSSESSKDYS 2105

Query: 924  VFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPS 745
             F+RE AE+LQNELD MQLP+ +RWRIQSAMPILFPSVRWSISCQPPSV+PAAL+SL PS
Sbjct: 2106 AFEREGAENLQNELDRMQLPETVRWRIQSAMPILFPSVRWSISCQPPSVAPAALSSLLPS 2165

Query: 744  ISFSGLNPGNS-NLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVP 568
               S L+  N  N  QR P SL RTA SV+GK K +  QQ+ D+E+DPW LLEDGAGS  
Sbjct: 2166 NPISVLHSSNGLNQTQRTPVSLLRTAMSVSGKAKHVSSQQENDLEVDPWILLEDGAGSSQ 2225

Query: 567  SSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSSN+  + G D+ANL+AS+WLKG VRVRRTDL YIGAVDDDS
Sbjct: 2226 SSSNSTLVGGSDNANLKASNWLKGTVRVRRTDLTYIGAVDDDS 2268


>ref|XP_011036341.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X2 [Populus euphratica]
          Length = 2249

 Score = 2201 bits (5704), Expect = 0.0
 Identities = 1200/1908 (62%), Positives = 1395/1908 (73%), Gaps = 44/1908 (2%)
 Frame = -3

Query: 6030 EPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSFI 5851
            EPSPGGSDL DNSRRAYTTSAL+EMLRYLILAVPDTFV+LDCFPLPP VVS+ VN+G+F+
Sbjct: 381  EPSPGGSDLEDNSRRAYTTSALIEMLRYLILAVPDTFVSLDCFPLPPIVVSYAVNEGAFV 440

Query: 5850 SKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPGR 5671
            SK  EDA K  N   EV  +FR KGL+AQY SLS    VS IQKRADNLA AA  G P  
Sbjct: 441  SKASEDARKTTNNSAEVADVFRSKGLDAQYHSLSFDRVVSFIQKRADNLAKAASSGYPVH 500

Query: 5670 NMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLSF 5494
            ++AKAVQ LDKAL  GD+R AY +LFE+ C+  VDEGW  EV+PCLR S+KW+  V+LS 
Sbjct: 501  SVAKAVQALDKALSLGDIREAYSYLFENFCERAVDEGWIEEVSPCLRLSLKWLRGVSLSP 560

Query: 5493 VCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKNK 5314
            V S+F LCEWATCD+RDFR+A P  LKFTGRKDFSQ+YI  RLLKL  +D+Q     KN+
Sbjct: 561  VRSVFLLCEWATCDYRDFRSAPPRELKFTGRKDFSQVYIVSRLLKLKIQDLQSPSVWKNE 620

Query: 5313 NVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVVC 5134
                VNS  K   + N YFG    GN + +K+  K+V+ K    SD+F SPGPLHDI+VC
Sbjct: 621  KSPRVNSLAKVSNEPN-YFGCIPRGNGHGIKSISKTVNRKGTNTSDIFGSPGPLHDIIVC 679

Query: 5133 WIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRHC 4954
            WIDQHE  +GEG KRL LLI EL RSGIF PQAYVRQLI+ GI D +GP  DL R KRH 
Sbjct: 680  WIDQHEVCSGEGLKRLHLLIVELIRSGIFSPQAYVRQLIISGITDTSGPAPDLHRQKRHY 739

Query: 4953 KILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFH-DHHKSPNSAKSSSK 4777
            ++LK LPGP+V D LEEAR+ E   L E + VYSNERRL+L+    + +++ + +  S K
Sbjct: 740  RVLKHLPGPFVHDVLEEARVAEGSELLEAMCVYSNERRLLLRRLLCEQYQNSDKSNISLK 799

Query: 4776 EQKHHPTSMW-EGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            + KHHP     +GASP+S +QWK     S+ +  +      D+E LK +I          
Sbjct: 800  KLKHHPPIAGKDGASPSSFEQWKNIYPHSSKVKTEM-----DIENLKDSISALLQLPTYS 854

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GSVKRP  SI +K ++ E +PGCE+C   KRQKLSEE++S LQG S
Sbjct: 855  TSSETGLDESQ---GSVKRPAESIGSKMDIVE-TPGCEDCRKAKRQKLSEERNSCLQGQS 910

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P LSDDE+ WWVR+G KS +S KVD P K SKQV++GRQK+VRKTQSLA LAAARIEGSQ
Sbjct: 911  P-LSDDEDTWWVRRGAKSSDSSKVDQPPKSSKQVSKGRQKVVRKTQSLAHLAAARIEGSQ 969

Query: 4242 GASTSHVCDSRISCPHHRTGFEGE-AKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITV 4066
            GASTSHVCDS++SCPHHRTG EG+  KS+DGI     GDIVSIGK LK+LR VEK+ ITV
Sbjct: 970  GASTSHVCDSKVSCPHHRTGIEGDNLKSMDGIGKVRVGDIVSIGKSLKQLRPVEKRTITV 1029

Query: 4065 WLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVS 3886
            WLITVVRQLVEE EK A KVSQ++R F  V D+SS+RWKLGEDELSAILYLMDV  DLVS
Sbjct: 1030 WLITVVRQLVEETEKNATKVSQFNRSFVNVDDRSSIRWKLGEDELSAILYLMDVCSDLVS 1089

Query: 3885 AVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAAD 3706
            + + LLWLLPK+ ++PNST+ SGR ++M PRNV +  CEVGE+FL+SS+RRYENI++A D
Sbjct: 1090 SAKLLLWLLPKVPSNPNSTIQSGRNIMMPPRNVENHACEVGEAFLVSSLRRYENIIIATD 1149

Query: 3705 LIPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRL 3526
            LIP+ LSA M R AT++ASN R+SGSAAF+Y+R+LLKK+SN+ SV++WEK+FK TCDKRL
Sbjct: 1150 LIPEVLSATMRRVATLLASNERISGSAAFIYSRHLLKKYSNMPSVLEWEKSFKATCDKRL 1209

Query: 3525 ISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQ 3346
             SELES RSLD EFG PLGVPAGV DLDDF RQKIS +R+SRVG+SMRD+VQR++++AF 
Sbjct: 1210 FSELESGRSLDAEFGYPLGVPAGV-DLDDFFRQKISGSRLSRVGMSMRDVVQRNIDDAFH 1268

Query: 3345 FFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXX 3166
            +F GKERKL   GT K P +EK D  YQIAQQI++GLMDC RQTGGAAQEGDP       
Sbjct: 1269 YF-GKERKLLGAGTAKSPGMEKSDYAYQIAQQIIMGLMDCMRQTGGAAQEGDPSLVSSAV 1327

Query: 3165 XXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSR 3025
                  VG  IAK              ++T  L+ ARRILRIHI CLCLLKEALGERQSR
Sbjct: 1328 SAIVNNVGPTIAKMPDFSLGSNYSNASAATGSLNPARRILRIHINCLCLLKEALGERQSR 1387

Query: 3024 VFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA------------------KTT 2899
            VFE+ALATEASSALA   +PGKA R+ FQ+SPE+HDS+                   K+ 
Sbjct: 1388 VFEVALATEASSALATAFSPGKASRSPFQMSPESHDSSGNISSDILNNSAKATGRGTKSA 1447

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             LER+VTV RLKEG+D+IQF+                FK+DN +
Sbjct: 1448 AAISALLVGAIIHGVTTLERLVTVLRLKEGLDVIQFIRSMKSNSNGNARSFVVFKMDNSI 1507

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            EV V WFR+LVGNCRT+S GLIVELLGE SIVALSRMQR LPL LV PPAYSIFAFVIWR
Sbjct: 1508 EVYVHWFRLLVGNCRTVSGGLIVELLGEPSIVALSRMQRLLPLSLVFPPAYSIFAFVIWR 1567

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             F       TREDI+QL  SLT+AIGDAIKHLPFRDVCLRD++G YD++ AD+ D+EFAA
Sbjct: 1568 PFF-----ATREDIHQLNDSLTIAIGDAIKHLPFRDVCLRDSQGLYDLIAADSIDAEFAA 1622

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLSQ---DDGNRVSGQGESMVRYAENE 2188
            MLEL+  D+  K+ AFVPLR RLFLNAIIDCK+PLS    DDGNRVSG G   V++AENE
Sbjct: 1623 MLELNNLDVRFKSKAFVPLRGRLFLNAIIDCKLPLSLITLDDGNRVSGHGGPKVQHAENE 1682

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            TKLLDKLV+V+D LQPAKFHWQW+ELRLLLNEQALIEKLEARD SLADAI   SP+P+K 
Sbjct: 1683 TKLLDKLVNVLDALQPAKFHWQWVELRLLLNEQALIEKLEARDMSLADAIRPSSPDPEKA 1742

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
            AASENENNFIEIILTRLLVRPDAAPLF+E+VHLFG  LEDSMLLQ KWFLGG DVLFGRK
Sbjct: 1743 AASENENNFIEIILTRLLVRPDAAPLFSELVHLFGTSLEDSMLLQVKWFLGGHDVLFGRK 1802

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            +IRQRL+NIAESKGLSTKA F KPWGW  + FD   ++ DK KFE  SLEEGEVVE    
Sbjct: 1803 TIRQRLMNIAESKGLSTKAHFWKPWGWSSNGFDPVMDRGDKKKFEVPSLEEGEVVE---- 1858

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
                        + EG ++ QQ+VTERAL+ELVLPCIDQ SDDSRNTFA+DLIKQ+NNIE
Sbjct: 1859 ------------EYEGSSLFQQNVTERALVELVLPCIDQGSDDSRNTFATDLIKQLNNIE 1906

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALR 1288
            QQ+N+VT G SKQ GT +SG+EG  NK NNRK +RGGSPGL RR     D    SPAALR
Sbjct: 1907 QQINSVTHGTSKQTGTTSSGLEGPANKSNNRKGIRGGSPGLVRRAAATADSTLPSPAALR 1966

Query: 1287 ASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSL 1108
            ASMSLRLQ L+RLLP IC D EPS RNMR + ASVILRLLGSRVVHEDA+ S     S  
Sbjct: 1967 ASMSLRLQLLLRLLPTICTDGEPSGRNMRQMLASVILRLLGSRVVHEDAELSLYPLPSFQ 2026

Query: 1107 LKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLK-PSSKLTAECTKD 931
             KR              DLSG S            LSS RPSWLK +  SS       KD
Sbjct: 2027 SKR---KLELQLEAASADLSGGSLFDQLLLILHGLLSSSRPSWLKSRSASSSKAVNEFKD 2083

Query: 930  FPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQ 751
            F  FDRE+ ESLQN+LD MQLP  I+ RIQSAMPIL PSVR  ISCQPP V  AA++SLQ
Sbjct: 2084 FSGFDRELVESLQNDLDRMQLPGTIQLRIQSAMPILLPSVRCLISCQPPPVPTAAVSSLQ 2143

Query: 750  PSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKP----LPIQQDLDMEIDPWTLLEDG 583
            PSI+ SG   G++  AQ+NPA LAR+AN+++ K+KP    LP+QQD DMEIDPWTLLEDG
Sbjct: 2144 PSIAVSGFYNGSN--AQKNPAPLARSANNISTKSKPLPHLLPLQQDGDMEIDPWTLLEDG 2201

Query: 582  AGSVPSSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
             GS PSSSN + I   DHANLRASSWLKG VRVRRTDL YIGAVDDDS
Sbjct: 2202 TGSGPSSSNISVIGSIDHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 2249


>ref|XP_011036316.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X1 [Populus euphratica]
            gi|743789431|ref|XP_011036326.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 isoform X1
            [Populus euphratica] gi|743789435|ref|XP_011036332.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 isoform X1 [Populus euphratica]
          Length = 2262

 Score = 2192 bits (5680), Expect = 0.0
 Identities = 1200/1921 (62%), Positives = 1395/1921 (72%), Gaps = 57/1921 (2%)
 Frame = -3

Query: 6030 EPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSFI 5851
            EPSPGGSDL DNSRRAYTTSAL+EMLRYLILAVPDTFV+LDCFPLPP VVS+ VN+G+F+
Sbjct: 381  EPSPGGSDLEDNSRRAYTTSALIEMLRYLILAVPDTFVSLDCFPLPPIVVSYAVNEGAFV 440

Query: 5850 SKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPGR 5671
            SK  EDA K  N   EV  +FR KGL+AQY SLS    VS IQKRADNLA AA  G P  
Sbjct: 441  SKASEDARKTTNNSAEVADVFRSKGLDAQYHSLSFDRVVSFIQKRADNLAKAASSGYPVH 500

Query: 5670 NMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLSF 5494
            ++AKAVQ LDKAL  GD+R AY +LFE+ C+  VDEGW  EV+PCLR S+KW+  V+LS 
Sbjct: 501  SVAKAVQALDKALSLGDIREAYSYLFENFCERAVDEGWIEEVSPCLRLSLKWLRGVSLSP 560

Query: 5493 VCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKNK 5314
            V S+F LCEWATCD+RDFR+A P  LKFTGRKDFSQ+YI  RLLKL  +D+Q     KN+
Sbjct: 561  VRSVFLLCEWATCDYRDFRSAPPRELKFTGRKDFSQVYIVSRLLKLKIQDLQSPSVWKNE 620

Query: 5313 NVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVVC 5134
                VNS  K   + N YFG    GN + +K+  K+V+ K    SD+F SPGPLHDI+VC
Sbjct: 621  KSPRVNSLAKVSNEPN-YFGCIPRGNGHGIKSISKTVNRKGTNTSDIFGSPGPLHDIIVC 679

Query: 5133 WIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRHC 4954
            WIDQHE  +GEG KRL LLI EL RSGIF PQAYVRQLI+ GI D +GP  DL R KRH 
Sbjct: 680  WIDQHEVCSGEGLKRLHLLIVELIRSGIFSPQAYVRQLIISGITDTSGPAPDLHRQKRHY 739

Query: 4953 KILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFH-DHHKSPNSAKSSSK 4777
            ++LK LPGP+V D LEEAR+ E   L E + VYSNERRL+L+    + +++ + +  S K
Sbjct: 740  RVLKHLPGPFVHDVLEEARVAEGSELLEAMCVYSNERRLLLRRLLCEQYQNSDKSNISLK 799

Query: 4776 EQKHHPTSMW-EGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            + KHHP     +GASP+S +QWK     S+ +  +      D+E LK +I          
Sbjct: 800  KLKHHPPIAGKDGASPSSFEQWKNIYPHSSKVKTEM-----DIENLKDSISALLQLPTYS 854

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GSVKRP  SI +K ++ E +PGCE+C   KRQKLSEE++S LQG S
Sbjct: 855  TSSETGLDESQ---GSVKRPAESIGSKMDIVE-TPGCEDCRKAKRQKLSEERNSCLQGQS 910

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P LSDDE+ WWVR+G KS +S KVD P K SKQV++GRQK+VRKTQSLA LAAARIEGSQ
Sbjct: 911  P-LSDDEDTWWVRRGAKSSDSSKVDQPPKSSKQVSKGRQKVVRKTQSLAHLAAARIEGSQ 969

Query: 4242 GASTSHVCDSRISCPHHRTGFEGE-AKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITV 4066
            GASTSHVCDS++SCPHHRTG EG+  KS+DGI     GDIVSIGK LK+LR VEK+ ITV
Sbjct: 970  GASTSHVCDSKVSCPHHRTGIEGDNLKSMDGIGKVRVGDIVSIGKSLKQLRPVEKRTITV 1029

Query: 4065 WLITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVS 3886
            WLITVVRQLVEE EK A KVSQ++R F  V D+SS+RWKLGEDELSAILYLMDV  DLVS
Sbjct: 1030 WLITVVRQLVEETEKNATKVSQFNRSFVNVDDRSSIRWKLGEDELSAILYLMDVCSDLVS 1089

Query: 3885 AVRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAAD 3706
            + + LLWLLPK+ ++PNST+ SGR ++M PRNV +  CEVGE+FL+SS+RRYENI++A D
Sbjct: 1090 SAKLLLWLLPKVPSNPNSTIQSGRNIMMPPRNVENHACEVGEAFLVSSLRRYENIIIATD 1149

Query: 3705 LIPDTLSAAMHRAATIMASNGRVSGSA-------------AFVYARYLLKKFSNVASVVD 3565
            LIP+ LSA M R AT++ASN R+SGSA             AF+Y+R+LLKK+SN+ SV++
Sbjct: 1150 LIPEVLSATMRRVATLLASNERISGSAXXXXXXXXXXXSAAFIYSRHLLKKYSNMPSVLE 1209

Query: 3564 WEKNFKTTCDKRLISELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSM 3385
            WEK+FK TCDKRL SELES RSLD EFG PLGVPAGV DLDDF RQKIS +R+SRVG+SM
Sbjct: 1210 WEKSFKATCDKRLFSELESGRSLDAEFGYPLGVPAGV-DLDDFFRQKISGSRLSRVGMSM 1268

Query: 3384 RDLVQRHVEEAFQFFSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGA 3205
            RD+VQR++++AF +F GKERKL   GT K P +EK D  YQIAQQI++GLMDC RQTGGA
Sbjct: 1269 RDVVQRNIDDAFHYF-GKERKLLGAGTAKSPGMEKSDYAYQIAQQIIMGLMDCMRQTGGA 1327

Query: 3204 AQEGDPXXXXXXXXXXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCL 3064
            AQEGDP             VG  IAK              ++T  L+ ARRILRIHI CL
Sbjct: 1328 AQEGDPSLVSSAVSAIVNNVGPTIAKMPDFSLGSNYSNASAATGSLNPARRILRIHINCL 1387

Query: 3063 CLLKEALGERQSRVFEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------- 2908
            CLLKEALGERQSRVFE+ALATEASSALA   +PGKA R+ FQ+SPE+HDS+         
Sbjct: 1388 CLLKEALGERQSRVFEVALATEASSALATAFSPGKASRSPFQMSPESHDSSGNISSDILN 1447

Query: 2907 ----------KTTXXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXX 2758
                      K+                  LER+VTV RLKEG+D+IQF+          
Sbjct: 1448 NSAKATGRGTKSAAAISALLVGAIIHGVTTLERLVTVLRLKEGLDVIQFIRSMKSNSNGN 1507

Query: 2757 XXXXXGFKVDNLVEVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVL 2578
                  FK+DN +EV V WFR+LVGNCRT+S GLIVELLGE SIVALSRMQR LPL LV 
Sbjct: 1508 ARSFVVFKMDNSIEVYVHWFRLLVGNCRTVSGGLIVELLGEPSIVALSRMQRLLPLSLVF 1567

Query: 2577 PPAYSIFAFVIWRRFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYD 2398
            PPAYSIFAFVIWR F       TREDI+QL  SLT+AIGDAIKHLPFRDVCLRD++G YD
Sbjct: 1568 PPAYSIFAFVIWRPFF-----ATREDIHQLNDSLTIAIGDAIKHLPFRDVCLRDSQGLYD 1622

Query: 2397 IVVADANDSEFAAMLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLSQ---DDGNRVS 2227
            ++ AD+ D+EFAAMLEL+  D+  K+ AFVPLR RLFLNAIIDCK+PLS    DDGNRVS
Sbjct: 1623 LIAADSIDAEFAAMLELNNLDVRFKSKAFVPLRGRLFLNAIIDCKLPLSLITLDDGNRVS 1682

Query: 2226 GQGESMVRYAENETKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLA 2047
            G G   V++AENETKLLDKLV+V+D LQPAKFHWQW+ELRLLLNEQALIEKLEARD SLA
Sbjct: 1683 GHGGPKVQHAENETKLLDKLVNVLDALQPAKFHWQWVELRLLLNEQALIEKLEARDMSLA 1742

Query: 2046 DAICSLSPNPDKTAASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAK 1867
            DAI   SP+P+K AASENENNFIEIILTRLLVRPDAAPLF+E+VHLFG  LEDSMLLQ K
Sbjct: 1743 DAIRPSSPDPEKAAASENENNFIEIILTRLLVRPDAAPLFSELVHLFGTSLEDSMLLQVK 1802

Query: 1866 WFLGGQDVLFGRKSIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEAT 1687
            WFLGG DVLFGRK+IRQRL+NIAESKGLSTKA F KPWGW  + FD   ++ DK KFE  
Sbjct: 1803 WFLGGHDVLFGRKTIRQRLMNIAESKGLSTKAHFWKPWGWSSNGFDPVMDRGDKKKFEVP 1862

Query: 1686 SLEEGEVVEDGTDLKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNT 1507
            SLEEGEVVE                + EG ++ QQ+VTERAL+ELVLPCIDQ SDDSRNT
Sbjct: 1863 SLEEGEVVE----------------EYEGSSLFQQNVTERALVELVLPCIDQGSDDSRNT 1906

Query: 1506 FASDLIKQMNNIEQQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTG 1327
            FA+DLIKQ+NNIEQQ+N+VT G SKQ GT +SG+EG  NK NNRK +RGGSPGL RR   
Sbjct: 1907 FATDLIKQLNNIEQQINSVTHGTSKQTGTTSSGLEGPANKSNNRKGIRGGSPGLVRRAAA 1966

Query: 1326 VVDIVPASPAALRASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHE 1147
              D    SPAALRASMSLRLQ L+RLLP IC D EPS RNMR + ASVILRLLGSRVVHE
Sbjct: 1967 TADSTLPSPAALRASMSLRLQLLLRLLPTICTDGEPSGRNMRQMLASVILRLLGSRVVHE 2026

Query: 1146 DADQSFSLTMSSLLKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLK 967
            DA+ S     S   KR              DLSG S            LSS RPSWLK +
Sbjct: 2027 DAELSLYPLPSFQSKR---KLELQLEAASADLSGGSLFDQLLLILHGLLSSSRPSWLKSR 2083

Query: 966  -PSSKLTAECTKDFPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQ 790
              SS       KDF  FDRE+ ESLQN+LD MQLP  I+ RIQSAMPIL PSVR  ISCQ
Sbjct: 2084 SASSSKAVNEFKDFSGFDRELVESLQNDLDRMQLPGTIQLRIQSAMPILLPSVRCLISCQ 2143

Query: 789  PPSVSPAALASLQPSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKP----LPIQQDL 622
            PP V  AA++SLQPSI+ SG   G++  AQ+NPA LAR+AN+++ K+KP    LP+QQD 
Sbjct: 2144 PPPVPTAAVSSLQPSIAVSGFYNGSN--AQKNPAPLARSANNISTKSKPLPHLLPLQQDG 2201

Query: 621  DMEIDPWTLLEDGAGSVPSSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDD 442
            DMEIDPWTLLEDG GS PSSSN + I   DHANLRASSWLKG VRVRRTDL YIGAVDDD
Sbjct: 2202 DMEIDPWTLLEDGTGSGPSSSNISVIGSIDHANLRASSWLKGAVRVRRTDLTYIGAVDDD 2261

Query: 441  S 439
            S
Sbjct: 2262 S 2262


>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like isoform X1 [Solanum tuberosum]
            gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X2 [Solanum tuberosum]
          Length = 2262

 Score = 2178 bits (5643), Expect = 0.0
 Identities = 1155/1901 (60%), Positives = 1389/1901 (73%), Gaps = 36/1901 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            QEPSPGGSDLVDNSRRAYT +ALVEMLRYL+LAVPDTFVALDCFP+PPCV+++VV DGS 
Sbjct: 379  QEPSPGGSDLVDNSRRAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSL 438

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
             SKV ED  K+KNG  EV    RDKG E +  S SI  AVSSIQKRA +LA AARPG+PG
Sbjct: 439  YSKVTEDTRKVKNGPFEVAYFLRDKGPEVRSDSYSISRAVSSIQKRAQHLATAARPGHPG 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCDC-VDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++ KA+  LDKAL  GD+R AY+FLFE++ +  +D+ W AEV+ CLRSS+K+I  VTLS
Sbjct: 499  QSVVKALHALDKALAHGDLREAYKFLFENVRESSIDDCWFAEVSSCLRSSLKYIRGVTLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FF+CEWATCDFRDFR A P G+KFTGRKDFS +Y+A+RLLK   R+   S   ++
Sbjct: 559  SICSVFFICEWATCDFRDFRFAPPRGMKFTGRKDFSAIYVAVRLLKQKMRESGISSRPRD 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
              +   N   K PGQ+ NY G T      E   N +    K  +F  +F SP PLHD +V
Sbjct: 619  LKIVKNNHLRKDPGQLTNYAGRTLASGASESLCNSRRAREKCSDFLGMFDSPSPLHDTIV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE QN EGFKR+QLLI EL R+GIFYPQAYVRQLIV GIMD +GPL+D  + KRH
Sbjct: 679  CWIDQHEVQNTEGFKRIQLLIIELIRAGIFYPQAYVRQLIVSGIMDGDGPLSDPVKQKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSK 4777
            CKILK LPGPYV DALEEARI + P+LSEV++VY NER+LVL G  D +   NSA  SS 
Sbjct: 739  CKILKHLPGPYVHDALEEARIADTPVLSEVVNVYCNERKLVLHGMIDSY---NSACGSSY 795

Query: 4776 EQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXXX 4597
             ++    +  E  S  S+DQ  + +S    +S K V R  +LEELK +I           
Sbjct: 796  HKRKPRPNSGENLSAPSIDQLSSSESGPF-MSSKNVGRDVELEELKRSITALLQFPSSSS 854

Query: 4596 XXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFSP 4417
                          S+++ ++  SN  +  EG+PGCEEC   K+QKLSEEKSSY Q +  
Sbjct: 855  TDTGVEDSQV----SLRKAIVYGSNGMDSSEGTPGCEECRRAKKQKLSEEKSSYSQIYPQ 910

Query: 4416 NLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQG 4240
            N SDDEE WW+RKG KS ESF+ +PP KP+K  +RGRQKIVRKTQSLA LAAARIEGSQG
Sbjct: 911  NPSDDEETWWMRKGQKSIESFRAEPPPKPAKTASRGRQKIVRKTQSLAHLAAARIEGSQG 970

Query: 4239 ASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            ASTSHVCDS++SCPHHR G EG   KS DGIR  + GD+VSIGKILK+LRFV+K+ +T+W
Sbjct: 971  ASTSHVCDSKVSCPHHRPGIEGSVPKSGDGIRMPN-GDVVSIGKILKRLRFVDKRTMTLW 1029

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI +V++LVEE+EKT  KV QY RPF A  ++   RWK+GEDELSA+LYL+D  D+LV A
Sbjct: 1030 LIGIVKELVEESEKTVTKVGQYGRPFSAADERGCARWKIGEDELSAVLYLIDACDELVLA 1089

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
             RFLLWLLPK+L S ++TV   R +L +P+N  + +CEVGE++LLSS+RRYE I+VAADL
Sbjct: 1090 ARFLLWLLPKVLGSCSATVHGSRNILTIPKNTENNVCEVGEAYLLSSMRRYEGIIVAADL 1149

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            IP+TLS  MHRA TI+ SNGRVSGS A +YARYLLKK+ +V SV +WEKN K+T DKRL 
Sbjct: 1150 IPETLSVVMHRAQTILTSNGRVSGSPAVIYARYLLKKYGSVGSVTEWEKNVKSTFDKRLA 1209

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SE+ES R +DGEFG PLGVP GV+D DD+ RQKI+  RVSRVGLSMRD+VQ+ V+EA  +
Sbjct: 1210 SEVESGRLVDGEFGFPLGVPVGVQDPDDYFRQKITGVRVSRVGLSMRDIVQKKVDEAVNY 1269

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
            F GK+RKLF P + K P  +KW+D YQI QQIV+GLMDC RQTGGAAQEGDP        
Sbjct: 1270 FYGKDRKLFGPNSGKMPGFQKWEDVYQIGQQIVMGLMDCMRQTGGAAQEGDPTLVSSAIS 1329

Query: 3162 XXXXXVGLFIAK------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSRVF 3019
                 VG  IAK             S++  L +AR ILRIH+ CLC+LKEALGERQSRVF
Sbjct: 1330 AIVINVGQVIAKIPDLTASNNHPSSSTSASLQFARCILRIHVICLCILKEALGERQSRVF 1389

Query: 3018 EIALATEASSALAQVIAPGKAPRTQFQLSPETHDSN-----------------AKTTXXX 2890
            E+ALATE SSALAQ+ APGKAPR+QFQLSPE++DSN                 AK +   
Sbjct: 1390 EVALATETSSALAQLSAPGKAPRSQFQLSPESNDSNLSSDILNNSSRVVIGRVAKISAAV 1449

Query: 2889 XXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEVS 2710
                          LERMV++FRLK+G+D++ F+                 K D+L EVS
Sbjct: 1450 SALVIGAILQGVSSLERMVSLFRLKDGLDIVHFVRSMRSNSNGNARSVGILKADSLAEVS 1509

Query: 2709 VIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRFI 2530
            V WFRVLVGNCRT+SDG IV+LLGEASI+ L RMQR LPL LV PPAYS+FAFV+WR  I
Sbjct: 1510 VHWFRVLVGNCRTVSDGFIVDLLGEASILPLFRMQRMLPLNLVFPPAYSMFAFVLWRPLI 1569

Query: 2529 LNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAMLE 2350
            LNA+  TR+++  L+ SL LA GD IKHLPFR+VCLRDT   YD++ AD  DS+FA++LE
Sbjct: 1570 LNASSGTRDEVQHLHHSLMLAFGDVIKHLPFREVCLRDTHSLYDLIAADTVDSDFASLLE 1629

Query: 2349 LSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENETKL 2179
             SG D+  K+ +FVPLRARLFLNA+IDC++P      +DGN+V+ QGES    AENETKL
Sbjct: 1630 ASGVDLRSKSSSFVPLRARLFLNALIDCRIPPTIAKLNDGNQVALQGESKFHCAENETKL 1689

Query: 2178 LDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAAS 1999
            LDKLV+++DTLQPAKFHWQW+ELRLLLNEQA++EKLEA D SL + + SLSPN DKT+ S
Sbjct: 1690 LDKLVYILDTLQPAKFHWQWVELRLLLNEQAVMEKLEAHDLSLVEVLRSLSPNTDKTSVS 1749

Query: 1998 ENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSIR 1819
            ENE+N IE+ILTRLLVRPDAAPLF+EVVHL GR LEDSMLLQAKWFLGG DVL GRKS+R
Sbjct: 1750 ENESNIIEMILTRLLVRPDAAPLFSEVVHLLGRSLEDSMLLQAKWFLGGNDVLLGRKSVR 1809

Query: 1818 QRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLKS 1639
            QRL NIA S+GLST+AQ+ KPWGWC +N D  T+K +K K E +S+EEGEVV++GT LK 
Sbjct: 1810 QRLNNIAVSRGLSTRAQYWKPWGWCTTNSDPTTSKREKFKSEVSSIEEGEVVDEGTTLKR 1869

Query: 1638 HGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQM 1459
              +GS + +DVE     + HVTERAL++L+LPC+DQ+SDDSR+TFASD+IKQMN IEQQ+
Sbjct: 1870 PVKGSGRTVDVE-----KLHVTERALVDLILPCLDQASDDSRSTFASDMIKQMNLIEQQI 1924

Query: 1458 NAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRASM 1279
            NAVTR ASK AGTV SGIE    K ++RK  RG SPGLARR TG  + +P SPAALRAS+
Sbjct: 1925 NAVTREASKPAGTVASGIESPTTK-SSRKGTRGSSPGLARRATGPAETMPPSPAALRASL 1983

Query: 1278 SLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLLKR 1099
            SLRLQF++RL  +I ADREPS RNMRH+ ASVILR+LGSRVVHEDA  SF+   SS  KR
Sbjct: 1984 SLRLQFILRLFSIIYADREPSGRNMRHVLASVILRILGSRVVHEDASHSFNQACSS--KR 2041

Query: 1098 XXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFPVF 919
                         V +S ES            LS ++P WLK K SSK   E +KD+  F
Sbjct: 2042 EVDSLVEASATASVVVSLESLFDRLLLLLHGLLSCHQPRWLKWKSSSKAPRESSKDYSAF 2101

Query: 918  DREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPSIS 739
            +RE AESLQN+LD MQLP+ +RWRIQ AMPILFPS R SISCQPPSV PAAL+SL PS  
Sbjct: 2102 EREGAESLQNDLDRMQLPETVRWRIQCAMPILFPSARLSISCQPPSVLPAALSSLLPSNP 2161

Query: 738  FSGLNPGN-SNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPSS 562
             S L+  N SN  QRNP SL RTA SVAGK K +  QQ+ D E+DPW LLEDGAGS  SS
Sbjct: 2162 VSVLHSSNGSNQTQRNPGSLLRTATSVAGKAKHVSSQQENDHEVDPWILLEDGAGSSNSS 2221

Query: 561  SNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SN+  + GGDHANL+AS+WLKG VRVRRTDL YIGAVDDDS
Sbjct: 2222 SNSPLVGGGDHANLKASNWLKGTVRVRRTDLTYIGAVDDDS 2262


>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Solanum lycopersicum] gi|723661077|ref|XP_010326357.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 [Solanum lycopersicum]
            gi|723661080|ref|XP_010326364.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Solanum
            lycopersicum] gi|723661083|ref|XP_010326367.1| PREDICTED:
            mediator of RNA polymerase II transcription subunit 12
            [Solanum lycopersicum] gi|723661086|ref|XP_010326372.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 [Solanum lycopersicum]
            gi|723661089|ref|XP_010326377.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Solanum
            lycopersicum] gi|723661092|ref|XP_010326379.1| PREDICTED:
            mediator of RNA polymerase II transcription subunit 12
            [Solanum lycopersicum] gi|723661095|ref|XP_010326382.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 [Solanum lycopersicum]
            gi|723661098|ref|XP_010326384.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Solanum
            lycopersicum] gi|723661101|ref|XP_010326387.1| PREDICTED:
            mediator of RNA polymerase II transcription subunit 12
            [Solanum lycopersicum]
          Length = 2262

 Score = 2176 bits (5638), Expect = 0.0
 Identities = 1154/1901 (60%), Positives = 1389/1901 (73%), Gaps = 36/1901 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            QEPSPGGSDLVDNSRRAYT +ALVEMLRYL+LAVPDTFVALDCFP+PPCV+++VV DGS 
Sbjct: 379  QEPSPGGSDLVDNSRRAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSL 438

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
             SKV ED  K+KNG  EV    RDKG E +  S SI  AVSSIQKRA +LA AARPG+PG
Sbjct: 439  YSKVTEDTRKVKNGPFEVAYFLRDKGPEIRSDSYSISRAVSSIQKRAQHLATAARPGHPG 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCDC-VDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++ KA+  LDKAL  GD+R AY+FLFE++ +  +D+ W AEV+ CLRSS+K+I  VTLS
Sbjct: 499  QSVVKALHALDKALAHGDLREAYKFLFENVHESSIDDCWFAEVSSCLRSSLKYIRGVTLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+F++CEWATCDFRDFR A P G+KFTGRKDFS +Y+A+RLLKL  R+   S   ++
Sbjct: 559  SICSVFYICEWATCDFRDFRFAPPRGMKFTGRKDFSAIYVAVRLLKLKMRETGISSRPRD 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
              +   N   K PGQ+ NY G T      E  +N +    K  +F  +F SP PLHD +V
Sbjct: 619  PKIVKNNHLRKDPGQLTNYAGRTLASGASESLSNSRRAREKCNDFLGMFDSPSPLHDTIV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE QN EGFKR+QLLI EL R+GIFYPQAYVRQLIV GIMD + PL+D  + KRH
Sbjct: 679  CWIDQHEVQNTEGFKRVQLLIIELIRAGIFYPQAYVRQLIVSGIMDGDEPLSDPVKQKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSK 4777
            CKILK LPGPYV DALEEARI + P+LSEV++VY NER+LVL G  D + S     SS  
Sbjct: 739  CKILKHLPGPYVHDALEEARIADTPVLSEVVNVYCNERKLVLHGMIDSYNS--GCGSSHH 796

Query: 4776 EQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXXX 4597
            + K  P S  E  S  S+DQ  + +S    +S K V R  +LEELK +I           
Sbjct: 797  KHKPRPNS-GENLSAPSIDQLSSSESGPF-MSSKNVGRDVELEELKRSITALLQFPSSSS 854

Query: 4596 XXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFSP 4417
                          S+++ V+  SN  +  EG+PGCEEC   K+QKLSEEKSSY Q +  
Sbjct: 855  TDTGVEDSQV----SLRKAVVYGSNGMDNSEGTPGCEECRRAKKQKLSEEKSSYSQIYQQ 910

Query: 4416 NLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQG 4240
            N SDDEE WW+RKG KS ESF+ +PP KP+K  +RGRQKIVRKTQSLA LAAARIEGSQG
Sbjct: 911  NPSDDEETWWMRKGQKSIESFRAEPPPKPAKTASRGRQKIVRKTQSLAHLAAARIEGSQG 970

Query: 4239 ASTSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            ASTSHVCDS++SCPHHR G EG   KS DGIR  + GD+VSIGKILK+LRFV+K+ +T+W
Sbjct: 971  ASTSHVCDSKVSCPHHRPGIEGSVPKSGDGIRMPN-GDVVSIGKILKRLRFVDKRTMTLW 1029

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI +V++LVEE+EKT  KV QY RPF A  ++  VRWK+GEDELS +LYL+D  D+LV A
Sbjct: 1030 LIGIVKELVEESEKTVTKVGQYGRPFSAADERGCVRWKIGEDELSVVLYLIDACDELVLA 1089

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
             RFLLWLLPK+L S ++TV   R +L +P+N  + +CEVGE++LLSS+RRYE I+VAADL
Sbjct: 1090 ARFLLWLLPKVLGSCSATVHGSRNILTIPKNTENNICEVGEAYLLSSMRRYEGIIVAADL 1149

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            IP+TLS  MHRA TI+ SNGRVSGS A +Y RYLLKK+ +V SV +WEKN K+T DKRL 
Sbjct: 1150 IPETLSVVMHRAQTILTSNGRVSGSPAVIYVRYLLKKYGSVGSVAEWEKNVKSTFDKRLA 1209

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SE+ES R +DGEFG PLGVP GV+D DD+ RQKI+  RVSRVGLSMRD+VQ+ V+EA  +
Sbjct: 1210 SEVESGRLVDGEFGFPLGVPVGVQDPDDYFRQKITGVRVSRVGLSMRDIVQKKVDEAVNY 1269

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
            F GK+RKLF P + K P  +KW+D YQI QQIV+GLMDC RQTGGAAQEGDP        
Sbjct: 1270 FYGKDRKLFGPNSGKLPGFQKWEDVYQIGQQIVMGLMDCMRQTGGAAQEGDPTLVSSAIS 1329

Query: 3162 XXXXXVGLFIAK------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSRVF 3019
                 VG  IAK             S++  L +AR ILRIH+TCLC+LKEALGERQSRVF
Sbjct: 1330 AIVINVGQVIAKIPELTASNNHPSSSTSASLQFARCILRIHVTCLCILKEALGERQSRVF 1389

Query: 3018 EIALATEASSALAQVIAPGKAPRTQFQLSPETHDSN-----------------AKTTXXX 2890
            E+ALATE SSALAQ+ APGKAPR+QFQLSPE++DSN                 AK +   
Sbjct: 1390 EVALATETSSALAQLFAPGKAPRSQFQLSPESNDSNLSSDILNNSSRVVIGRAAKISAAV 1449

Query: 2889 XXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEVS 2710
                          LERMV++FRLK+G+D++ F+                 K D+L EVS
Sbjct: 1450 SALVIGAILQGVSSLERMVSLFRLKDGLDVVHFVRSMRSNSNGNARSVGILKADSLAEVS 1509

Query: 2709 VIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRFI 2530
            V WFRVLVGNCRT+SDG IV+LLGEASI+ L RMQR LPL LV PPAYS+FAFV+WR  I
Sbjct: 1510 VHWFRVLVGNCRTVSDGFIVDLLGEASILPLFRMQRILPLNLVFPPAYSMFAFVLWRPLI 1569

Query: 2529 LNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAMLE 2350
            LNA+  TR+++  L+ SL LA  D IKHLPFR+VCLRDT   YD++ AD  DS+FA++LE
Sbjct: 1570 LNASSGTRDEVQHLHHSLMLAFADVIKHLPFREVCLRDTHSLYDLIAADTVDSDFASLLE 1629

Query: 2349 LSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENETKL 2179
             SG D+ LK  +FVPLRARLFLNA+IDC++P      +DGN+++ QGES    AENETKL
Sbjct: 1630 ASGVDLRLKTSSFVPLRARLFLNALIDCRIPQTIAKLNDGNQLALQGESKFHSAENETKL 1689

Query: 2178 LDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAAS 1999
            LDKLV+++DTLQPAKFHWQW+ELRLLLNEQA++EKLEA D SL +A+ SLSPN DK + S
Sbjct: 1690 LDKLVYILDTLQPAKFHWQWVELRLLLNEQAVMEKLEAHDLSLVEALRSLSPNTDKASVS 1749

Query: 1998 ENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSIR 1819
            ENE+N IE+ILTRLLVRPDAAPLF+EVVHL GR LEDSMLLQAKWFLGG DVL GRKS+R
Sbjct: 1750 ENESNIIEMILTRLLVRPDAAPLFSEVVHLLGRSLEDSMLLQAKWFLGGNDVLLGRKSVR 1809

Query: 1818 QRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLKS 1639
            QRL NIA S+GLST+AQ+ KPWGWC +N D  T+K +K K E +S+EEGEVV++GT LK 
Sbjct: 1810 QRLHNIAVSRGLSTRAQYWKPWGWCTTNSDPTTSKREKLKSEVSSIEEGEVVDEGTTLKR 1869

Query: 1638 HGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQM 1459
              +GS + +DVE     + HVTERAL++L+LPC+DQ+SDDSR+TFASD+IKQMN IEQQ+
Sbjct: 1870 PVKGSGRTVDVE-----KLHVTERALVDLILPCLDQASDDSRSTFASDMIKQMNLIEQQI 1924

Query: 1458 NAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRASM 1279
            NAVTR ASK AGTV SGIE    K ++RK  RG SPGLARR TG  + VP SP ALRAS+
Sbjct: 1925 NAVTREASKPAGTVASGIESPTTK-SSRKGTRGSSPGLARRATGPAETVPPSPGALRASL 1983

Query: 1278 SLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLLKR 1099
            SLRLQF++RL  +I ADREPS RNMRH+ ASVILR+LGSRVVHEDA  SF+   +S  KR
Sbjct: 1984 SLRLQFILRLFSIIYADREPSGRNMRHVLASVILRILGSRVVHEDASYSFNQACNS--KR 2041

Query: 1098 XXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFPVF 919
                         V +S ES            LSS++P WLK K +SK  +E +KD+  F
Sbjct: 2042 EVDSLVEASATASVVVSLESLFDRLLLLLHGLLSSHQPRWLKWKSNSKAPSESSKDYSAF 2101

Query: 918  DREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPSIS 739
            +RE AESLQN+LD MQLP+ +RWRIQ AMPILFPS R SISCQPPSV PAAL+SL PS  
Sbjct: 2102 EREGAESLQNDLDRMQLPETVRWRIQCAMPILFPSARLSISCQPPSVLPAALSSLLPSNP 2161

Query: 738  FSGLNPGN-SNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPSS 562
             S L+  N SN  QRNP SL RTA SVAGK K +  QQ+ D E+DPW LLEDGAGS  SS
Sbjct: 2162 VSVLHSSNGSNQTQRNPGSLLRTATSVAGKAKHVSSQQENDHEVDPWILLEDGAGSSHSS 2221

Query: 561  SNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SN+  + GGDHANL+AS+WLKG VRVRRTDL YIGAVDDDS
Sbjct: 2222 SNSPLVGGGDHANLKASNWLKGTVRVRRTDLTYIGAVDDDS 2262


>gb|KHG08703.1| Putative mediator of RNA polymerase II transcription subunit 12
            [Gossypium arboreum]
          Length = 2245

 Score = 2139 bits (5542), Expect = 0.0
 Identities = 1159/1903 (60%), Positives = 1385/1903 (72%), Gaps = 38/1903 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYT SALVEMLRYLI A PDTFVALDCFPLP CV+SH  +DG F
Sbjct: 381  REPSPGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCVLSHTPSDGGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K KN   +   + R KG ++QY SLS  H VS+++KRADNLA  A  G P 
Sbjct: 441  LSKPSDDAAK-KNYSADAYAV-RGKGFDSQYHSLSFNHVVSTVEKRADNLAKGATAGYPS 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++AKAVQ LDKAL+QGDV  AY+ +F DL D  V EGW AEV+PCLRSS+KW+ TV LS
Sbjct: 499  QSVAKAVQTLDKALLQGDVIDAYKHIFNDLYDGAVGEGWVAEVSPCLRSSLKWLQTVNLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCD+RDFRTA P  +KFTG KDFSQ+Y+AI+LLKL  +++Q       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPSDVKFTGSKDFSQIYLAIQLLKLKMKELQ------- 611

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
            K ++   +  K   Q N+Y     +G+ +E K+N K ++G+ ++FSD+F SPGPLHDI+V
Sbjct: 612  KKLKKERASRKNTSQQNSYSSKDLLGDTHEAKSNGKCLNGRRRKFSDIFDSPGPLHDIIV 671

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL + EL RSGIFYPQAYVRQLIV GI+D NGP+ADL+R KRH
Sbjct: 672  CWIDQHEGHKGEGSKRLQLFMLELIRSGIFYPQAYVRQLIVSGIIDTNGPMADLNRRKRH 731

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQG-FHDHHKSPNSAKSSS 4780
             +ILKQLPG ++ +ALEEARI E   L E I+VYSNERRLVLQ  F D + + N++ + +
Sbjct: 732  QRILKQLPGQFMVNALEEARIAEGSELLEAINVYSNERRLVLQELFFDSYNNTNNSHALA 791

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            K+   H TS  +  S  S D+ +  Q++      KT  R  DLEELKA+I          
Sbjct: 792  KKLNCHSTSGRDVDSQVSCDKRRTVQAS------KTFRREVDLEELKASISVLLQFPSSS 845

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GS+KR + S  +K +  EG+PGCE+C  VKRQKLSE+KSS LQ  S
Sbjct: 846  FCTADSGVDESQ--GSIKRSIGSTHSKMDSVEGTPGCEDCKRVKRQKLSEDKSSCLQVSS 903

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDDE+ WWVRKG K+ E  KVDP LK +KQ +RGRQK VRKTQSLAQLAAARIE SQ
Sbjct: 904  PIPSDDEDTWWVRKGPKNLEGSKVDPLLKSTKQASRGRQKPVRKTQSLAQLAAARIEDSQ 963

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSHVCD++ISCPHHRT  E   K VDGIRT H  DI+SIG+ LK+LRFVEK+V+T+W
Sbjct: 964  GASTSHVCDNKISCPHHRTEVEN-LKPVDGIRTTHHADIISIGRGLKQLRFVEKRVVTIW 1022

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            L++VVRQLVEE+EK+  K SQY RPF A  +KS +RWKLGEDELSAILYL+DVS D  SA
Sbjct: 1023 LLSVVRQLVEESEKSVPKASQYGRPFVAADEKSPLRWKLGEDELSAILYLLDVSCDSASA 1082

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            V+FLLWLLPK +++P+  + SGR +LM+PRNV +  CEVGE++LLSS+RRYENIL+AADL
Sbjct: 1083 VKFLLWLLPKAISNPSPAIHSGRNILMVPRNVENYACEVGEAYLLSSLRRYENILIAADL 1142

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            +P+ LSA M R A  MA+NGR++GS A V+A YLL+++ ++ASV++WEKNFK TCDKRL+
Sbjct: 1143 VPEALSATMRRVAAFMATNGRITGSGALVFACYLLRRYGSIASVIEWEKNFKGTCDKRLL 1202

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES R+ +GEFG P GVPAG ED DD+ RQ+I+  R+SRVG SMRD+VQRH+++   +
Sbjct: 1203 SELESGRT-EGEFGFPHGVPAGTEDPDDYCRQRINVGRLSRVGASMRDMVQRHIDDVLHY 1261

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
              GKERK F     K PA EK DD YQ+AQQI++GLMDCFRQTGGA QEGDP        
Sbjct: 1262 ILGKERKHFAANAPKSPATEKGDDDYQVAQQIIMGLMDCFRQTGGAFQEGDPGLVSSAVS 1321

Query: 3162 XXXXXVGLFIAK-PSSTV------------PLDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK P  T              L +A+RIL IH+ CLCLLKEALGER+S+ 
Sbjct: 1322 AIVSNVGPTLAKIPDFTSGSTYSNYQPPMNSLKFAKRILHIHLICLCLLKEALGERKSQA 1381

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSN-----------AKTTXXXXXXXX 2875
            FEIALATEA SALA   AP K+ R Q  LSP++ DS+           AK T        
Sbjct: 1382 FEIALATEAFSALAVAFAPAKSSRGQL-LSPDSLDSHTNISNDNSHSSAKATLGRTTKMA 1440

Query: 2874 XXXXXXXXXL-------ERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVE 2716
                     +       ERMV+V RLKEG+D++QF+                FKVDN VE
Sbjct: 1441 AVSALVIGAIIHGVISLERMVSVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKVDNSVE 1500

Query: 2715 VSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRR 2536
            V V  FR+ VGNCRT+ DGL++ELLGE S++ALSRMQR LP+ LV PPAY+IFAF+IW+ 
Sbjct: 1501 VYVHLFRLFVGNCRTVCDGLVLELLGEQSVLALSRMQRLLPINLVFPPAYAIFAFMIWKP 1560

Query: 2535 FILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAM 2356
            FILN+N    EDI+QLYQSLT+AIGDAIKH PFRDVC+RDTRGFYDIV AD  D+EFAAM
Sbjct: 1561 FILNSNTARSEDIHQLYQSLTMAIGDAIKHRPFRDVCMRDTRGFYDIVAADTTDAEFAAM 1620

Query: 2355 LELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENET 2185
            LEL+G DMHLK+MAFVPLRARLFLNAIIDCKMP S   QDDGNRVSG  E     AE  +
Sbjct: 1621 LELNGLDMHLKSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSEPKALRAET-S 1679

Query: 2184 KLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTA 2005
            KLLDKLV  +DTLQPAKFHWQW+ELRLLLNEQALI+K+E  D SL DAI S SP+ ++ +
Sbjct: 1680 KLLDKLVCALDTLQPAKFHWQWVELRLLLNEQALIDKIENHDMSLVDAIRSSSPSSERAS 1739

Query: 2004 ASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKS 1825
             SE+E  FIEIILTRLLVRPDAAPLF+EVVHLFGR LEDSML+QAKWFLGG DVL GRK+
Sbjct: 1740 PSESEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSMLMQAKWFLGGLDVLLGRKT 1799

Query: 1824 IRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDL 1645
            +RQRL NIAE+K LSTK+QF KPWGW YS  D  TN  +K K E TSLEEGEV+E+G + 
Sbjct: 1800 VRQRLSNIAENKNLSTKSQFWKPWGWSYSGADPVTNSGEKRKSEVTSLEEGEVIEEGMES 1859

Query: 1644 KSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQ 1465
            K   +GSTQV D+EG  ++QQHVTE+A IELV+PCIDQSS DS NTFASDLIKQ N IEQ
Sbjct: 1860 KGCVKGSTQV-DIEGSGINQQHVTEKAFIELVIPCIDQSSADSHNTFASDLIKQFNTIEQ 1918

Query: 1464 QMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARR-PTGVVDIVPASPAALR 1288
            Q+N+VTRG SKQ GT +SGIEG  NK NNRK +RGGSPGLA+R P  V    P SPAALR
Sbjct: 1919 QINSVTRGVSKQTGTASSGIEGPTNKINNRKGIRGGSPGLAKRTPAPVESAPPPSPAALR 1978

Query: 1287 ASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSL 1108
            ASMSLRLQF++RLLP+ICAD EPS+R+MR++ ASVILRLLGSRVVHED D      +SS 
Sbjct: 1979 ASMSLRLQFIVRLLPIICADGEPSARSMRNMLASVILRLLGSRVVHEDVD------LSSN 2032

Query: 1107 LKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDF 928
            L +              ++SG+S            LSS +PSWLK K +        KDF
Sbjct: 2033 LAQLKRDMELMPIVASTEMSGDSLFDRLSLVLHGLLSSCKPSWLKSKDA--------KDF 2084

Query: 927  PVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQP 748
              FDRE  E LQNELD MQLP+ IRWRIQ+AMPILFPS   ++SCQPPSV   AL+ LQP
Sbjct: 2085 SGFDREAVEGLQNELDSMQLPEMIRWRIQAAMPILFPSFHNTVSCQPPSVPIGALSLLQP 2144

Query: 747  SISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVP 568
            SI   G   G  N  QR  AS AR AN++ GK+K L + Q+ DMEIDPWTLLEDGAGS P
Sbjct: 2145 SICVPGSYTGTINPPQRQVAS-ARNANNMPGKSK-LVLSQENDMEIDPWTLLEDGAGSGP 2202

Query: 567  SSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSS+TA I G D+ANLRASSWLKG VRVRRTD +YIGAVDDDS
Sbjct: 2203 SSSSTAAIGGSDNANLRASSWLKGAVRVRRTDPSYIGAVDDDS 2245


>gb|KHG17230.1| Putative mediator of RNA polymerase II transcription subunit 12
            [Gossypium arboreum]
          Length = 2251

 Score = 2127 bits (5510), Expect = 0.0
 Identities = 1149/1903 (60%), Positives = 1359/1903 (71%), Gaps = 38/1903 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGG+DLVDNSRRAYT SALVEMLRYLI AVPDTFVALDCFPLP CVVSH  +D  F
Sbjct: 381  REPSPGGADLVDNSRRAYTVSALVEMLRYLIQAVPDTFVALDCFPLPTCVVSHAFSDVGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K+K+       L + KG ++QYQSLS  H VS+I K ADNLA  A  G P 
Sbjct: 441  LSKSSDDAGKIKSNSAYAYVL-KVKGFDSQYQSLSFDHVVSTIHKCADNLAKGASAGYPC 499

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            ++MAKAVQ LDKAL+ GD+  AY+ +F+DLCD  V EGW A+V+PCLRSS+KW+ TV LS
Sbjct: 500  QSMAKAVQTLDKALLHGDLIEAYKHIFDDLCDGAVGEGWVAKVSPCLRSSLKWLQTVNLS 559

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCDFRDFRTA PH LKFTGRKDFSQ+Y+AI LLKL +++ Q     K 
Sbjct: 560  LICSVFFLCEWATCDFRDFRTAPPHNLKFTGRKDFSQIYLAIHLLKLKRKEWQNP-EYKK 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
                G+ S        NNY     +GN YE K+N K V G++   SD+F SPGPLHDI+V
Sbjct: 619  GRASGLYSTANNTSYQNNYSRRNLLGNIYEAKSNGKYVHGRSSSSSDIFDSPGPLHDIIV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL I EL RSGIFYPQAYVRQLIV GI+D + P+ADLDR KRH
Sbjct: 679  CWIDQHEGLKGEGGKRLQLFILELIRSGIFYPQAYVRQLIVSGIIDISRPMADLDRRKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGF-HDHHKSPNSAKSSS 4780
             +ILKQLPG Y+ D LEEARI +   L E ++VYSNERRLVL     D H S N++  S+
Sbjct: 739  HRILKQLPGQYMLDILEEARIAKGSELLEAVNVYSNERRLVLHNLLFDQHNSANTSHVST 798

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
             ++K H TS  +GA   S D+WK  QS+      KT  R  DLE LKA+I          
Sbjct: 799  NDKKSHSTSGRDGAFQVSGDRWKTLQSS------KTFRRDVDLEGLKASISVLLQFPSLS 852

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GS KR V S  NK ++ EG+PG E+C  VKRQKLSE+KS YLQ  S
Sbjct: 853  STSADSGVEESQ--GSSKRSVGSTCNKPDMFEGAPGYEDCKRVKRQKLSEDKSLYLQAPS 910

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDDE+ WW+RKG K+ ESFK DPPLK +KQV+RGRQK VRKTQSLAQLAAARIEGSQ
Sbjct: 911  PIPSDDEDTWWMRKGQKNIESFKSDPPLKSTKQVSRGRQKTVRKTQSLAQLAAARIEGSQ 970

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSH+CD++I+C HHRT  E   K VDGIRT H GDIVSI K LK+LRFVEK++I VW
Sbjct: 971  GASTSHICDNKINCSHHRTEVE-TLKPVDGIRTTHFGDIVSIEKGLKQLRFVEKRIIMVW 1029

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI+VV+QLVEE+EK+ AK  QY RPF A  +KS + WKLGEDELS IL+LMDVS D VSA
Sbjct: 1030 LISVVKQLVEESEKSVAKAGQYGRPFIAADEKSPLGWKLGEDELSVILHLMDVSCDSVSA 1089

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            ++FLLWLLP + ++P  TV SGR  L +PRNV +  C VGE++LLSS+RRYENIL+AADL
Sbjct: 1090 IKFLLWLLPIVSSNPGPTVHSGRNSLRVPRNVDNCACAVGEAYLLSSLRRYENILIAADL 1149

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            +P+ LSA M RAA IMA+NGRV+GS   V+A YLLKK+  VASV++WEK +K TCDKRL+
Sbjct: 1150 VPEALSAIMLRAAAIMATNGRVTGSGTLVFAWYLLKKYGKVASVIEWEKKYKGTCDKRLL 1209

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES +  +G+FG   GVP G+ED DD+ R+KI+  R SRVGLSMRD+VQRHV++    
Sbjct: 1210 SELESGQQ-EGDFGFAFGVPGGIEDPDDYFRKKITGGRFSRVGLSMRDMVQRHVDDVLHS 1268

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
              GKERKL   G  K PA+EK  DGYQ+AQQI++GLMDC RQTGGAAQEGDP        
Sbjct: 1269 LLGKERKLVAAGAPKTPAIEKGVDGYQVAQQIIMGLMDCIRQTGGAAQEGDPGLVSSAVS 1328

Query: 3162 XXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK               S   L +A+RILRIH+ CLCLLKEALGERQSR 
Sbjct: 1329 AIVGNVGSTLAKIPDFTGGSNYSNYQPSISSLSFAKRILRIHLICLCLLKEALGERQSRA 1388

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FE+AL TEASSALA   AP K+ R QF+LSP+  +SNA                   K +
Sbjct: 1389 FEVALGTEASSALAVAFAPAKSSRGQFKLSPDAPESNANISGDNLNSSAKSTLGRTTKMS 1448

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             LERMVTV RLKEG+D++QF+                FK+DN  
Sbjct: 1449 AAISALLLGAIVHGVISLERMVTVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKLDNSF 1508

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            E+ V WFR+ VGNCRT+ DGL++ELLGE  +VALS MQR LP+ LV PPAY+IFAFVIW+
Sbjct: 1509 EIYVHWFRLFVGNCRTVCDGLVLELLGEQPVVALSSMQRLLPINLVFPPAYAIFAFVIWK 1568

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FIL++NI +REDI+QLYQSLT+AIGDA+KH+PFRDVC+RDTRGFYDI+ AD  DSEFAA
Sbjct: 1569 PFILSSNIASREDIHQLYQSLTMAIGDAVKHIPFRDVCMRDTRGFYDIIAADTTDSEFAA 1628

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMP---LSQDDGNRVSGQGESMVRYAENE 2188
            +LEL+G D HLK+MAF+PLRARLFLNAIIDCKMP   L+ D+GNRVSG GES    AEN+
Sbjct: 1629 LLELNGLDTHLKSMAFIPLRARLFLNAIIDCKMPYSALTHDEGNRVSGHGESKALRAEND 1688

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            +K   KL+  +D LQPAKF WQW+ELRLLLNEQALI+K+E+ D SL DA+ S SP+ ++ 
Sbjct: 1689 SK-QGKLIRALDALQPAKFRWQWVELRLLLNEQALIDKMESHDMSLVDALRSSSPSSERA 1747

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
            + SENE  FIEIILTRLLVRPDAAPLF+EVVHLFGR LEDS+L+QAKWFLGG DVL GRK
Sbjct: 1748 SPSENEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSLLMQAKWFLGGMDVLLGRK 1807

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            +IRQRLINIAE+K LSTK QF  PWGW YS  D  TN+ +K K EAT LEEGEV+E+  +
Sbjct: 1808 TIRQRLINIAETKNLSTKTQFWNPWGWSYSGGDPVTNRGEK-KNEATFLEEGEVIEEAVE 1866

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K   +GS   +DVEG N+SQQHVTE+A  +L+LPCIDQSS DSRNTFA+DLIKQ + IE
Sbjct: 1867 SKKCAKGSQ--IDVEGSNISQQHVTEKAFTKLILPCIDQSSADSRNTFANDLIKQFSTIE 1924

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALR 1288
            QQ+  VTRG SKQ GT +S IE + NK N+RK++RG SPGLARR     + VP SPAALR
Sbjct: 1925 QQVKLVTRGVSKQTGTASS-IEVSPNKSNSRKSIRGASPGLARRTMAPAESVPPSPAALR 1983

Query: 1287 ASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSL 1108
            ASMSLRLQF++RLLP+ICAD EPSSRN+RH+ ASVILRLLGSRVVHED D SF+      
Sbjct: 1984 ASMSLRLQFIVRLLPIICADGEPSSRNLRHMLASVILRLLGSRVVHEDVDLSFN------ 2037

Query: 1107 LKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDF 928
             K+              ++  +S            LSS +PSWL+ K ++        DF
Sbjct: 2038 FKQLKRDAELVSCIASSEIYRDSLFDRLLLVLHGLLSSCQPSWLRSKTAN--------DF 2089

Query: 927  PVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQP 748
              FDRE  ES QNELD MQLP+ IRWRIQ+AMPILFPS    ISC  PSV   AL+ LQ 
Sbjct: 2090 SGFDREALESFQNELDSMQLPEMIRWRIQAAMPILFPSFCNVISCHTPSVPVGALSVLQS 2149

Query: 747  SISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVP 568
            SI       G  N  QR  AS ARTAN++ GK K +P  Q+ DMEIDPWTLLEDGAGS P
Sbjct: 2150 SIYIPESCNGTLNAPQRQVAS-ARTANNIPGKAKSMPSLQEYDMEIDPWTLLEDGAGSSP 2208

Query: 567  SSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSS T  I G D ANLRASSWLKG VRVRRTDL Y GAVDDDS
Sbjct: 2209 SSSGTIVIGGSDCANLRASSWLKGAVRVRRTDLTYTGAVDDDS 2251


>ref|XP_012437707.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Gossypium raimondii]
            gi|823208654|ref|XP_012437708.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like
            [Gossypium raimondii] gi|823208656|ref|XP_012437709.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like [Gossypium raimondii]
            gi|763782410|gb|KJB49481.1| hypothetical protein
            B456_008G121300 [Gossypium raimondii]
          Length = 2251

 Score = 2125 bits (5507), Expect = 0.0
 Identities = 1144/1903 (60%), Positives = 1357/1903 (71%), Gaps = 38/1903 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGG+DLVDNSRRAYT SALVEMLRYLI AVPDTFVALDCFPLP CVVSH  +DG F
Sbjct: 381  REPSPGGADLVDNSRRAYTVSALVEMLRYLIQAVPDTFVALDCFPLPTCVVSHAFSDGGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K+K+   +   + + KG ++QYQSLS  H VS+I K ADNL   A  G P 
Sbjct: 441  LSKSSDDAGKIKSNSADAYVV-KVKGFDSQYQSLSFDHVVSTIHKCADNLVKGASAGYPS 499

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            ++MAKAVQ LDKAL+ GD+  AY+ +F+DLCD  V EGW AEV+PCLRSS+KW+ TV LS
Sbjct: 500  QSMAKAVQTLDKALLHGDLIEAYKHIFDDLCDGAVGEGWVAEVSPCLRSSLKWLQTVNLS 559

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCDFRDFRTA PH LKFTGRKDFSQ+Y+AI LLKL +++ Q     K 
Sbjct: 560  LICSVFFLCEWATCDFRDFRTAPPHNLKFTGRKDFSQIYLAIHLLKLKRKEWQNP-EYKK 618

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
                G+ S  K     NNY     +GN YE K+N K V+G++   SD+F SPGPLHDI+V
Sbjct: 619  GRASGLYSTAKNTSYQNNYSRRNLLGNIYEAKSNGKYVNGRSSSSSDIFDSPGPLHDIIV 678

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQLLI EL  SGIFYPQAYVRQLIV GI+D + P+ADLDR KRH
Sbjct: 679  CWIDQHEGLKGEGGKRLQLLILELIGSGIFYPQAYVRQLIVSGIIDISRPMADLDRRKRH 738

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGF-HDHHKSPNSAKSSS 4780
             +ILKQLPG Y+ D LEEARI +   L E ++VYSNERRL L     D H   N++  S+
Sbjct: 739  HRILKQLPGQYMLDILEEARIAKGSELLEAVNVYSNERRLALHNLLFDQHNCANTSHVST 798

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
             ++K H TS  +GA   S DQWK  QS+      KT  R  DLE LKA+I          
Sbjct: 799  NDKKSHSTSGRDGAFQVSGDQWKTLQSS------KTFRRDVDLEGLKASISVLLQFPSLS 852

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GS KR V S  NK ++ EG+PG E+C  VKRQKLSE+KS YLQ  S
Sbjct: 853  STSADSGVEESQ--GSSKRSVGSTCNKPDMFEGAPGYEDCKRVKRQKLSEDKSLYLQAPS 910

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDDE+ WW+RKG K+ ESFK DPP K +KQV+RGRQK VRKTQSLAQLAAARIEGSQ
Sbjct: 911  PIPSDDEDTWWMRKGQKNIESFKSDPPHKSTKQVSRGRQKTVRKTQSLAQLAAARIEGSQ 970

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSH+CD++I+C HHRT  E   K VDGIRT H GDIVSI K LK+LRFVEK+++ VW
Sbjct: 971  GASTSHICDNKINCSHHRTEVE-TLKPVDGIRTTHFGDIVSIEKGLKQLRFVEKRIVMVW 1029

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            LI+VV+QLVEE+EK+ AK  QY RPF A  +KS +RWKLGEDELS IL+LMDVS D VSA
Sbjct: 1030 LISVVKQLVEESEKSVAKAGQYGRPFIAADEKSPLRWKLGEDELSVILHLMDVSCDSVSA 1089

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            ++FLLWLLP + ++P  TV SGR  L +PRNV +  C VGE++LLSS+RRYENIL+AADL
Sbjct: 1090 IKFLLWLLPIVSSNPGPTVHSGRNSLRVPRNVDNCACAVGEAYLLSSLRRYENILIAADL 1149

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            +P+ LSA M RAA IMA+NGRV+GS   V+A YLLKK+  VASV++WEK +K  CDKRL 
Sbjct: 1150 VPEALSAIMLRAAAIMATNGRVTGSGTLVFALYLLKKYGKVASVIEWEKKYKGACDKRLF 1209

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES +  +G+FG P GVP G+ED DD+ R+KI+  R SRVGLSMRD+VQRHV++    
Sbjct: 1210 SELESGQQ-EGDFGFPFGVPGGIEDPDDYFRKKITGGRFSRVGLSMRDMVQRHVDDVLHS 1268

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
              GKERKL   G  K PA+EK  DGYQ+AQQI++GLMDC RQTGGAAQEGDP        
Sbjct: 1269 ILGKERKLVAAGAPKTPAVEKGGDGYQVAQQIIMGLMDCIRQTGGAAQEGDPGLVSSAVS 1328

Query: 3162 XXXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK               S   L +A+RILRIH+ CLCLLKEALGERQSR 
Sbjct: 1329 AIVGNVGSTLAKIPDFTGGSNYSNYQPSISSLSFAKRILRIHLICLCLLKEALGERQSRA 1388

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FE+AL TEASSALA   AP K+ R QF+LSP+  +S+A                   K +
Sbjct: 1389 FEVALGTEASSALAVAFAPAKSSRGQFKLSPDAPESSANISGDNLNSSAKSTLGRTTKMS 1448

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             LERMVTV RLKEG+D++QF+                FK+DN  
Sbjct: 1449 AAISALLLGAIVHGVISLERMVTVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKLDNSF 1508

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            E+ V WFR+ VGNCR++ DGL++ELLGE  IVALSRMQR LP+ LV PPAY+IFAFVIW+
Sbjct: 1509 EIYVHWFRLFVGNCRSVCDGLVLELLGEQPIVALSRMQRLLPINLVFPPAYAIFAFVIWK 1568

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FIL++NI +REDI+QLYQSLT+AIGDA+KH+PFRDVC+RDTRGFYDI+ AD  DSEFAA
Sbjct: 1569 PFILSSNIASREDIHQLYQSLTMAIGDAVKHIPFRDVCMRDTRGFYDIIAADTTDSEFAA 1628

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENE 2188
            +LEL+G D HLK+MAF+PLRARLFLNAIIDCKMP S    D+GNRVSG GES     EN+
Sbjct: 1629 LLELNGLDTHLKSMAFIPLRARLFLNAIIDCKMPYSAFTHDEGNRVSGHGESKALRGEND 1688

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            +K   KL+  +D LQPAKFHWQW+ELRLLLNEQALI+K+E  D SL DA+ S SP+ ++ 
Sbjct: 1689 SK-QGKLIRALDALQPAKFHWQWVELRLLLNEQALIDKMENHDMSLVDALRSSSPSSERA 1747

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
            + SENE  FIEIILTRLLVRPDAAPLF+EVVHLFGR LEDS+L+QAKWFLGG DVL GRK
Sbjct: 1748 SPSENEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSLLMQAKWFLGGMDVLLGRK 1807

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            ++RQRLINIAE+K LSTK QF KPWGW YS  D  TN+ +K K EAT LEEGEV+E+  +
Sbjct: 1808 TVRQRLINIAETKNLSTKTQFWKPWGWSYSGGDPVTNRGEK-KNEATFLEEGEVIEEAVE 1866

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K   +GS   +DVEG N+SQQHVTE+A I+L+LPCIDQSS +SRNTFA+DLIKQ + IE
Sbjct: 1867 SKKCAKGSQ--IDVEGSNISQQHVTEKAFIKLILPCIDQSSANSRNTFANDLIKQFSTIE 1924

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALR 1288
            QQ+  VTRG SKQ GT +S IE + NK N+RK++RG SPGLARR     + VP  PAALR
Sbjct: 1925 QQVKLVTRGISKQTGTASS-IEVSTNKSNSRKSIRGASPGLARRTMAPAESVPPPPAALR 1983

Query: 1287 ASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSL 1108
            ASMSLRLQF++RLLP+ICAD EPSSRNMRH+ ASVI RLLGSRVVHED D SF+      
Sbjct: 1984 ASMSLRLQFIVRLLPIICADGEPSSRNMRHMLASVIFRLLGSRVVHEDVDLSFN------ 2037

Query: 1107 LKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDF 928
             K+              ++  +S            LSS +PSWL+ K ++        D+
Sbjct: 2038 FKQLKRDAELVSSIASSEIYRDSLFDRLLLVLHGLLSSCQPSWLRSKTAN--------DY 2089

Query: 927  PVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQP 748
              FD E  ES QNELD MQLP+ IRWRIQ+AMPILFPS R  ISC  PSV   AL++LQ 
Sbjct: 2090 SGFDHEALESFQNELDSMQLPEIIRWRIQAAMPILFPSFRNVISCHTPSVPVGALSALQS 2149

Query: 747  SISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVP 568
            SI       G  N  QR  AS ARTAN++ GK K +P  Q+ DMEIDPWTLLEDGAGS  
Sbjct: 2150 SIYIPESCNGTLNAPQRQVAS-ARTANNIPGKAKSMPSLQEYDMEIDPWTLLEDGAGSSL 2208

Query: 567  SSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SSS T  I G D ANLRASSWLKG VRVRRTDL Y GAVDD S
Sbjct: 2209 SSSGTIVIGGSDRANLRASSWLKGAVRVRRTDLTYTGAVDDGS 2251


>ref|XP_012489946.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Gossypium raimondii] gi|763771802|gb|KJB38925.1|
            hypothetical protein B456_007G099500 [Gossypium
            raimondii] gi|763771806|gb|KJB38929.1| hypothetical
            protein B456_007G099500 [Gossypium raimondii]
            gi|763771807|gb|KJB38930.1| hypothetical protein
            B456_007G099500 [Gossypium raimondii]
          Length = 2246

 Score = 2114 bits (5478), Expect = 0.0
 Identities = 1142/1904 (59%), Positives = 1379/1904 (72%), Gaps = 39/1904 (2%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYT SALVEMLRYLI A PDTFVALDCFPLP CV+SH  +DG F
Sbjct: 381  REPSPGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCVLSHTPSDGGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K KN   +   + R KG ++QYQSLS  H VS+++KRADNLA  A  G P 
Sbjct: 441  LSKPSDDAAK-KNYTADAYAV-RGKGFDSQYQSLSFNHVVSTVEKRADNLAKGATAGYPS 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++AKAVQ LDKAL+QGDV  AY+ +F DL D  V EGW AEV+P LRSS+KW+ TV LS
Sbjct: 499  QSVAKAVQTLDKALLQGDVIDAYKHIFNDLYDGAVGEGWVAEVSPSLRSSLKWLQTVNLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCD+RDFRTA P  +KFTG KDFSQ+Y+AI+LLKL  +++Q       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPSDVKFTGSKDFSQIYLAIQLLKLKMKELQ------- 611

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
            K ++   +  K   Q N+Y     +G+ +E K+N K ++G+ + FSD+F SPGPLHDI+V
Sbjct: 612  KKLKKGRASRKNTSQQNSYSSKDLLGDTHEAKSNGKGLNGRRRNFSDIFDSPGPLHDIIV 671

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL + EL RSGIFYPQAYVRQL+V GI+D NGP+ADL+R KRH
Sbjct: 672  CWIDQHEGHKGEGSKRLQLFMLELIRSGIFYPQAYVRQLLVSGIIDTNGPMADLNRRKRH 731

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQG-FHDHHKSPNSAKSSS 4780
             +ILKQLPG ++ +ALEEARI E   L E I+VYSNER LVLQ  F D + + N++ + +
Sbjct: 732  QRILKQLPGQFMLNALEEARIAEGSELLEAINVYSNERLLVLQELFFDSYNNTNNSHALA 791

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            K+    PT   +  S  S D+ +  Q++      KT  R   LEELKA+I          
Sbjct: 792  KKLNCRPTLGRDVDSQVSCDKRRTVQAS------KTFRREVGLEELKASISVLLQFPSSS 845

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GS+KR + S  +K +  EG+PGCE+C  VKR KLSE+++S L+ +S
Sbjct: 846  FCSADSGEDESQ--GSIKRSIGSTHSKMDSVEGTPGCEDCKRVKRLKLSEDETSCLKVYS 903

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDD++ WWVRKG K+ E  KVDP LK +KQ +RGRQK VRKTQSLAQLAAARIE SQ
Sbjct: 904  PIPSDDDDTWWVRKGPKNLEGSKVDPLLKSTKQASRGRQKPVRKTQSLAQLAAARIEDSQ 963

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSHVCD++ISCPHHRT  E   K VDGIRT H  DI+SIG+ LK+LRFVEK+V+T+W
Sbjct: 964  GASTSHVCDNKISCPHHRTEVEN-LKPVDGIRTTHHADIISIGRGLKQLRFVEKRVVTIW 1022

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            L++VVRQLVEE+EK+  K SQY RPF A  +KS +RWKLGEDELSAILYL+DVS D  SA
Sbjct: 1023 LLSVVRQLVEESEKSVPKASQYGRPFVAADEKSPLRWKLGEDELSAILYLLDVSCDSASA 1082

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            V+FLLWLLPK +++P+  +  GR +LM+PRNV +  CEVGE++LLSS+RRYENIL+AADL
Sbjct: 1083 VKFLLWLLPKAISNPSPAIHGGRNILMVPRNVENYACEVGEAYLLSSLRRYENILIAADL 1142

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            +P+ LSA M   A+ MA+NGR++GS A V+A YLL+++ ++ASV++WEKNFK TCDKRL+
Sbjct: 1143 VPEALSATMRHVASFMATNGRITGSGALVFACYLLRRYGSIASVIEWEKNFKETCDKRLL 1202

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES R+ +GEFG P GVPAG ED DD+ RQ+I+  R+SR G+SMRD+VQR +++   +
Sbjct: 1203 SELESGRT-EGEFGFPHGVPAGTEDPDDYCRQRINVGRLSRAGVSMRDMVQRRIDDVLHY 1261

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
              GKERK F   T + PA EK DD YQ+AQQI++GLMDCFRQTGGA QEGDP        
Sbjct: 1262 ILGKERKHFAANTQRSPATEKGDDDYQVAQQIIMGLMDCFRQTGGAFQEGDPGLVSSAVS 1321

Query: 3162 XXXXXVGLFIAK-----PSSTVP--------LDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK       ST          L++A+R+L IH+ CLCLLKEALGER+S+ 
Sbjct: 1322 AIVSNVGPTLAKIPDFTSGSTYSNYQPPMNYLNFAKRLLHIHLICLCLLKEALGERKSQA 1381

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FEIALATEA SALA   AP K+ R Q  LSP++ DS+A                   K  
Sbjct: 1382 FEIALATEAFSALAVAFAPAKSSRGQL-LSPDSLDSHANISNDNSHSSAKATLGRTTKMA 1440

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             LERMV+V RLKEG+D++QF+                FKVDN V
Sbjct: 1441 AAVSALVIGAIIHGVISLERMVSVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKVDNSV 1500

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            EV V  FR+ VGNCRT+ DGL++ELLGE S++ALSRMQR LP+ LV PPAY+IFAF+IW+
Sbjct: 1501 EVYVHLFRLFVGNCRTVCDGLVLELLGEQSVLALSRMQRLLPINLVFPPAYAIFAFMIWK 1560

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FILN+N    EDI QLYQSLT+AIGDAIKH PFRDVC+RDTRGFYDIV AD  D+EFAA
Sbjct: 1561 PFILNSNTARSEDIQQLYQSLTVAIGDAIKHRPFRDVCMRDTRGFYDIVAADTTDAEFAA 1620

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENE 2188
            MLEL+G DMHLK+MAFVPLRARLFLNAIIDCKMP S   QDDGNRVSG  ES    AE  
Sbjct: 1621 MLELNGLDMHLKSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSESKALRAET- 1679

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            +KLLDKLV  +DT+QPAKFHWQW+ELRLLLNEQALI+K+E  D S+ DAI S SP+ ++ 
Sbjct: 1680 SKLLDKLVCALDTIQPAKFHWQWVELRLLLNEQALIDKIENHDMSIVDAIRSSSPSSERA 1739

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
              SE+E  FIEIILTRLLVRPDAAPLF+EVVHLFGR LEDSML+QAKWFLGG DVL GRK
Sbjct: 1740 TPSESEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSMLMQAKWFLGGLDVLLGRK 1799

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            ++RQRL NIAE+K LSTK+QF KPWGW YS  D  TN  +K K E TSLEEGEV+E+G +
Sbjct: 1800 TVRQRLSNIAENKNLSTKSQFWKPWGWSYSGVDPVTNSGEKRKSEVTSLEEGEVIEEGME 1859

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K   +GSTQV D+EG  ++QQHVTE+A IELV+PCIDQSS DS NTFASDLIKQ N IE
Sbjct: 1860 SKGCVKGSTQV-DIEGSGINQQHVTEKAFIELVIPCIDQSSADSHNTFASDLIKQFNTIE 1918

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARR-PTGVVDIVPASPAAL 1291
            QQ+N+VTRG SKQ GT +SGIEG  NK NNRK +RGGSPGLA+R P  V    P SPAAL
Sbjct: 1919 QQINSVTRGVSKQTGTASSGIEGPTNKINNRKGIRGGSPGLAKRTPAPVESAPPPSPAAL 1978

Query: 1290 RASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSS 1111
            RASMSLRLQF++RLLP+ICAD EPS+R+MR++ ASVILRLLGSRVVHED D      +SS
Sbjct: 1979 RASMSLRLQFIVRLLPIICADGEPSARSMRNMLASVILRLLGSRVVHEDVD------LSS 2032

Query: 1110 LLKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKD 931
             L +              ++SG+S            LSS +PSWLK K +        KD
Sbjct: 2033 NLAQLKRDMELMPVVASTEMSGDSLFDRLLLVLHGLLSSCKPSWLKSKDA--------KD 2084

Query: 930  FPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQ 751
            F  FDRE  E LQNELD MQLP+ IRWRIQ+AMPILFPS   ++SCQPPSV   AL+ LQ
Sbjct: 2085 FSGFDREAVEGLQNELDSMQLPEMIRWRIQAAMPILFPSFHNTVSCQPPSVPIGALSLLQ 2144

Query: 750  PSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSV 571
            PSI   G   G  N +QR  AS AR AN++ GK+K + + Q+ DMEIDPWTLLE GAGS 
Sbjct: 2145 PSICVPGSYTGTINPSQRQVAS-ARNANNMPGKSKSV-LSQENDMEIDPWTLLEYGAGSG 2202

Query: 570  PSSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            PSSS+TA I G D+ANLRASSWLKG VRVRRTD +YIGAVDDDS
Sbjct: 2203 PSSSSTAAIGGSDNANLRASSWLKGAVRVRRTDPSYIGAVDDDS 2246


>ref|XP_010055127.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X1 [Eucalyptus grandis]
            gi|629106462|gb|KCW71608.1| hypothetical protein
            EUGRSUZ_E00136 [Eucalyptus grandis]
          Length = 2270

 Score = 2101 bits (5444), Expect = 0.0
 Identities = 1116/1902 (58%), Positives = 1376/1902 (72%), Gaps = 38/1902 (1%)
 Frame = -3

Query: 6030 EPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSFI 5851
            EPSPGGSDLVDNSRR YT SA+VEMLRYLIL VPDTFVALDCFPLPP VVSH VNDG ++
Sbjct: 382  EPSPGGSDLVDNSRREYTCSAVVEMLRYLILTVPDTFVALDCFPLPPNVVSHTVNDGGYL 441

Query: 5850 SKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPGR 5671
            SK  ED  KM+    EV  LFR KG +A YQ++S GH VSSIQ+ AD LA     GNP  
Sbjct: 442  SKASEDVAKMEMCSAEVACLFRRKGFDAFYQAVSFGHVVSSIQRHADKLAKVVSSGNPSC 501

Query: 5670 NMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLSF 5494
              A+AVQ LDKAL+ GD++  Y+FLFED+ +  VD GW AEV+PCLR+S+KWIG++ LSF
Sbjct: 502  GYARAVQALDKALVHGDLKGTYKFLFEDVSEEAVDGGWIAEVSPCLRASLKWIGSLKLSF 561

Query: 5493 VCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKNK 5314
            + S+FFLCEWATCDFR+ RTA    + F+GRKDFSQ+Y+A+  LKL KRD++     +N 
Sbjct: 562  IYSVFFLCEWATCDFRNSRTAPLADVNFSGRKDFSQVYVAVLFLKLKKRDLENQSRRRND 621

Query: 5313 NVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVVC 5134
            NV GV S  KG  Q NN FG TS+ N +E  N+ ++VD K++  S    SPGPLHDI+VC
Sbjct: 622  NVGGVTSH-KGLSQENN-FGRTSMLNVFENGNSPENVDKKSRRLSGGLNSPGPLHDILVC 679

Query: 5133 WIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRHC 4954
            WIDQH+   GEGF+RLQLLI ELTR GIF P +YVRQL++ G+M  +G  AD DR  RH 
Sbjct: 680  WIDQHKVPKGEGFERLQLLIVELTRCGIFDPPSYVRQLLISGVMGLSGH-ADRDRRMRHY 738

Query: 4953 KILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSKE 4774
            +ILKQLPG  + DALEEARI +     E +HVY +ERRLVLQ  +   ++ ++A +S+ +
Sbjct: 739  RILKQLPGVLIHDALEEARIADRRQFLETMHVYLSERRLVLQELYGERRNLDNAHTSAHK 798

Query: 4773 QKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXXXX 4594
            +KH+  S   G SP SVDQWKA +S S+S   K     AD+EE+   I            
Sbjct: 799  KKHNIRS---GPSPTSVDQWKAVESPSSSFYPKK----ADIEEVNTLISNLLQFPNSISV 851

Query: 4593 XXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFSPN 4414
                        GS+KR   S  NK+++ + SPGCEEC  VK+QKL+EE+S+Y+Q  SP 
Sbjct: 852  PLFMGTDESE--GSIKRTAGSTCNKSDITDSSPGCEECRRVKKQKLTEERSAYIQVHSPI 909

Query: 4413 LSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQGA 4237
             SDDE+ WWVRKG KS ES KVDPPLK +KQ +RGRQK+VRKTQSLAQLAAARIEGS GA
Sbjct: 910  PSDDEDLWWVRKGPKSFESLKVDPPLKSTKQASRGRQKVVRKTQSLAQLAAARIEGSLGA 969

Query: 4236 STSHVCDSRISCPHHRTGFEGEA-KSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVWL 4060
            STSHVCDSR SC HH TG +GE  KSVDGIR  H  D++++GK LK+L   +++V+TVWL
Sbjct: 970  STSHVCDSRTSCSHHGTGVDGEIPKSVDGIRVTHSCDVITVGKALKQLCIAKRRVVTVWL 1029

Query: 4059 ITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSAV 3880
            + VV+QL+EE EKT+A+V Q++R F +++D+S+++WKL EDELS ILYL+DVSDDLVSAV
Sbjct: 1030 LDVVKQLIEEAEKTSAQVGQFNRNFTSLNDRSTLKWKLSEDELSNILYLLDVSDDLVSAV 1089

Query: 3879 RFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADLI 3700
            +F+LWLLPK   + +  + SGR +LM  R V S +CE+ E+FLLSS+RRYE+ L+AADLI
Sbjct: 1090 KFILWLLPKAFRTSSMAIHSGRNVLMPQRQVESHVCEIRETFLLSSLRRYESTLIAADLI 1149

Query: 3699 PDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLIS 3520
            P  LSA+M   AT+ ASN RVS ++A+ YARYLLKK+ NV SV++W K  K   DKRL++
Sbjct: 1150 PQALSASMDLVATVAASNARVSNTSAWAYARYLLKKYGNVTSVLEWRKTSKANRDKRLLA 1209

Query: 3519 ELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQFF 3340
            ELES R  DGEFG PLGVPAGV+DLDDFLRQK+ + R+SRVG++MR++VQR VEEAF FF
Sbjct: 1210 ELESGRPSDGEFGFPLGVPAGVDDLDDFLRQKMGTGRLSRVGMNMREIVQRRVEEAFHFF 1269

Query: 3339 SGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXXX 3160
            SGKE+K+F  G  KGP+LEK DDG+QI++QIV+ L +C  QTGG+ QEGDP         
Sbjct: 1270 SGKEKKVFAAGVPKGPSLEKGDDGFQISEQIVMELRECMMQTGGSFQEGDPSLVSSSISA 1329

Query: 3159 XXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSRVF 3019
                +G  +AK             PSST  L+ AR+ILRI+ITCLCLL++ LGERQSRVF
Sbjct: 1330 IIGSIGPTLAKIPDFTTGSSCTNSPSSTSSLNVARQILRINITCLCLLRDFLGERQSRVF 1389

Query: 3018 EIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNAKTT----------XXXXXXXXXX 2869
            EIALATEASSALA V  PGK+ R Q+QLSPE HDSN+ T+                    
Sbjct: 1390 EIALATEASSALAGVFNPGKSSRNQYQLSPEAHDSNSSTSSVVGRAARVIAAVSALIIGA 1449

Query: 2868 XXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEVSVIWFRVL 2689
                   LERMV+VFRLKE ID++QFM                FKV++ +E  V WFR+L
Sbjct: 1450 VIQGITSLERMVSVFRLKESIDVVQFMRSIRSNSNGSIRSPGTFKVESPIEGHVHWFRLL 1509

Query: 2688 VGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRFILNANIVT 2509
            VGNCRT+SDGL+VELLGE SIVALSRMQ+TLP+ LV PPAY+I AF++WR FIL++N+  
Sbjct: 1510 VGNCRTVSDGLVVELLGEPSIVALSRMQQTLPVGLVFPPAYAIMAFLMWRPFILSSNLAV 1569

Query: 2508 REDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAMLELSGPDMH 2329
            RED++QLYQSL+ A+ DA+KHLPFRDVCLRD+ G YD++ AD +DSEFA+MLEL+G D+H
Sbjct: 1570 REDMHQLYQSLSAAMSDALKHLPFRDVCLRDSVGLYDLISADTSDSEFASMLELNGTDLH 1629

Query: 2328 LKAMAFVPLRARLFLNAIIDCKMP--LSQDDGNRVSGQGESMVRYAENETKLLDKLVHVI 2155
            LK++AFVPLRARLFL+AII C++P  ++QDD +R++G G    R+AEN TKLLD++VHV+
Sbjct: 1630 LKSIAFVPLRARLFLDAIISCRIPALVTQDDRSRITGHGVLKDRFAENRTKLLDRIVHVL 1689

Query: 2154 DTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAASENENNFIE 1975
            +TLQPAKFHWQW+ELRLLLNEQALI+KLEA DT+L DA+ SL+P+ ++ A SENEN  IE
Sbjct: 1690 NTLQPAKFHWQWLELRLLLNEQALIDKLEAHDTTLVDAVRSLAPSSERAAVSENENTLIE 1749

Query: 1974 IILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSIRQRLINIAE 1795
            IILTRLLVRPDAAPLF+EVVHLFGR L+DSMLL  KWFL G DVLFGRK+IRQRL+NIAE
Sbjct: 1750 IILTRLLVRPDAAPLFSEVVHLFGRSLQDSMLLLTKWFLEGHDVLFGRKTIRQRLMNIAE 1809

Query: 1794 SKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLKSHGRGSTQV 1615
            SKG STK+Q  K WGW  S      N  DK K E  S+EEGEVVE+G D K   +GS QV
Sbjct: 1810 SKGFSTKSQIWKHWGWSTSGVGTIANN-DKKKHEVASIEEGEVVEEGVDPKKFSKGSIQV 1868

Query: 1614 -LDVEGVN--VSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQMNAVTR 1444
             LD EG +    QQ  TE+ALIELVLPCIDQSSD+SRNTFASDLIKQ+N IEQ +NA+ R
Sbjct: 1869 QLDAEGYSSRSMQQFATEKALIELVLPCIDQSSDESRNTFASDLIKQLNAIEQHINAIAR 1928

Query: 1443 GASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPAS------PAALRAS 1282
              SK  GT  SG EG   K NNRK MRGGSPGLARR         A+      PAALRAS
Sbjct: 1929 VTSKNTGTTASGTEGPAGKSNNRKGMRGGSPGLARRQAAAAAAAAAAADSAPPPAALRAS 1988

Query: 1281 MSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLLK 1102
            +SLRL FL+RLLP+ICADREP  RNMRH+ ASVILRLLG+++V++ AD +     +S  K
Sbjct: 1989 ISLRLHFLLRLLPIICADREPLGRNMRHMLASVILRLLGNQLVYDYADLAIHPLQTSQCK 2048

Query: 1101 R-XXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFP 925
            R               +  G++            LSS +PSWLK KP+ K   E  KDF 
Sbjct: 2049 REGDLPVEAPGHNAPSNFLGDTLFDRLLLVLHGLLSSSQPSWLKPKPTLKSAPEYIKDFA 2108

Query: 924  VFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPS 745
              D+E A++L NELD+MQLPD IRWRIQ+AMPIL PS+R  +SCQPPSV  AAL ++Q +
Sbjct: 2109 GIDKEAADNLLNELDNMQLPDKIRWRIQAAMPILLPSLRCFVSCQPPSVPAAALTTVQST 2168

Query: 744  ISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPS 565
            IS  G + GN NL QRN  S AR++ +  GK++P+  QQD +ME+D WTLLEDG G  PS
Sbjct: 2169 ISLPGASSGNLNLLQRNTVSSARSSATTTGKSRPVAPQQDYNMEVDAWTLLEDGVGGGPS 2228

Query: 564  SSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            SS TA I   D+ANLRA+SWLKG +RVRR DL Y+GAVDDDS
Sbjct: 2229 SSGTAGIGSADNANLRAASWLKGAMRVRRADLMYVGAVDDDS 2270


>ref|XP_011092371.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X1 [Sesamum indicum]
            gi|747045104|ref|XP_011092379.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 isoform X1
            [Sesamum indicum] gi|747045106|ref|XP_011092387.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 isoform X1 [Sesamum indicum]
          Length = 2221

 Score = 2093 bits (5424), Expect = 0.0
 Identities = 1135/1899 (59%), Positives = 1359/1899 (71%), Gaps = 34/1899 (1%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSR AYTT+A+VEMLRYLILAVPDTFVA DCFPLP CV+SHVVNDGSF
Sbjct: 382  REPSPGGSDLVDNSRLAYTTAAVVEMLRYLILAVPDTFVASDCFPLPHCVISHVVNDGSF 441

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK+ EDA K+K G +EV  + RD+  + Q +S+S    VSSIQKRA+ L+ AARP +P 
Sbjct: 442  LSKMAEDARKVKCGQIEVVGVPRDRNHDIQAESISFQSVVSSIQKRAETLSRAARPNHPS 501

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCDCV-DEGWTAEVNPCLRSSMKWIGTVTLS 5497
             N+AKA+Q LD+AL+ GD+ ++Y  L E+  D V  E W+AEV+PCL +S+K IGTVT S
Sbjct: 502  HNVAKALQVLDQALMHGDIGLSYNLLLENSWDGVCAERWSAEVSPCLLTSLKHIGTVTSS 561

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FF+CEWATCDFRDFRTA PHGLKFTGRKDFSQ++IA+RLLKL           K 
Sbjct: 562  LLCSIFFICEWATCDFRDFRTAPPHGLKFTGRKDFSQIFIAVRLLKL-----------KA 610

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
             N+                              N  + + K K  SD+F+SP PLHD++V
Sbjct: 611  SNIL-----------------------------NFYTSNQKKKNISDIFESPSPLHDVIV 641

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE  NGEGFKRLQLLI E  RSGIF P AY RQLIV GIMD NG + DL++ KRH
Sbjct: 642  CWIDQHEVHNGEGFKRLQLLIREFIRSGIFNPLAYGRQLIVSGIMDANGTMIDLEKRKRH 701

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQGFHDHHKSPNSAKSSSK 4777
             K+LKQLP PY+RDALEEA++ E PIL E +HVY  ERRLVL G H   KS    KS+SK
Sbjct: 702  YKLLKQLPAPYIRDALEEAQLAEPPILGEAMHVYLTERRLVLHGLHS--KSAPGVKSASK 759

Query: 4776 EQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXXX 4597
            +Q++H  S  E ASP+SVDQW  +  A+++LS         LEELKA+I           
Sbjct: 760  KQRYHHRSGSESASPSSVDQW--YFQATSNLSTTDDDADIKLEELKASIVVLLQLPHPSS 817

Query: 4596 XXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFSP 4417
                         GS+KRP     N+T+  E + GCEEC  VKRQKLSEE+SS LQ    
Sbjct: 818  SIDAGVDESQ---GSIKRPG-GAYNRTDGNEETSGCEECRRVKRQKLSEERSSLLQ---L 870

Query: 4416 NLSDDEENWWVRKGLK-SESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQG 4240
            N +DDEE WWVRKGLK  +SFK DPP KP+KQ +RGRQK VRKTQSLAQLAAARIEGSQG
Sbjct: 871  NPADDEEIWWVRKGLKYMDSFKADPPPKPAKQTSRGRQKPVRKTQSLAQLAAARIEGSQG 930

Query: 4239 ASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVWL 4060
            ASTSHVC+SR+ CPHHRTG +   K VDG R    GDI+SIGK+LK++RF EK+ + VW+
Sbjct: 931  ASTSHVCESRVGCPHHRTGSDDITKLVDGTRKPASGDIISIGKLLKQMRFAEKRTLIVWM 990

Query: 4059 ITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSAV 3880
            I+ V+QL+EE EKT  KV QY RP+P V D+ S RW+LGEDELSAILY+MDV ++ VSA+
Sbjct: 991  ISFVKQLIEEAEKTTPKVGQYGRPYPIVDDRRSSRWRLGEDELSAILYMMDVCNEFVSAI 1050

Query: 3879 RFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADLI 3700
            RFLLWLLPKI ++P S V S R M++LPR   + +C+VGE++LLSSIR YENI++AADLI
Sbjct: 1051 RFLLWLLPKIPSNPGSAVPS-RNMMILPRFAENNVCDVGEAYLLSSIRSYENIIIAADLI 1109

Query: 3699 PDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLIS 3520
            P+ LSA M RAA  +AS GR+SGS A VYAR+LLKK+SNV SVV+WEK FK+ CDKRL +
Sbjct: 1110 PEVLSATMRRAAMFLASKGRLSGSPALVYARHLLKKYSNVPSVVEWEKTFKSACDKRLSA 1169

Query: 3519 ELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQFF 3340
            E+ES R L+G+FG  LGVP GVEDLDD+ RQKI+  RVSRVGLSM+++V RHV+EAFQ+F
Sbjct: 1170 EIESGRCLEGDFGFTLGVPNGVEDLDDYFRQKINGVRVSRVGLSMKEIVHRHVDEAFQYF 1229

Query: 3339 SGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXXX 3160
              K+RK + PGT K  ++EK DDGYQIA QIV+GLMDC RQTGGAAQEGDP         
Sbjct: 1230 YNKDRKSYGPGTNKSLSMEKLDDGYQIAHQIVMGLMDCMRQTGGAAQEGDPSLVSSAIAA 1289

Query: 3159 XXXXVGLFIAK-------------PSSTVPLDYARRILRIHITCLCLLKEALGERQSRVF 3019
                VG  IA+              S +  L +AR ILRIHITCLC+LKEALGERQSRVF
Sbjct: 1290 IVNSVGHVIARIPDLTAGINHLNVSSPSGSLHFARCILRIHITCLCILKEALGERQSRVF 1349

Query: 3018 EIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-----------------KTTXXX 2890
            E+ALATEASSAL Q  APGKAPR+ FQ+SPE+HD NA                 + T   
Sbjct: 1350 EVALATEASSALMQTSAPGKAPRSPFQMSPESHDFNANLPNETLNHHKVIGRGARITAAV 1409

Query: 2889 XXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLVEVS 2710
                          L+RMV +FRLKEG+DLIQF                  KVDNL+EVS
Sbjct: 1410 SALVIGAILQGVASLDRMVALFRLKEGLDLIQFARSLKSNVNGSARSMGVLKVDNLIEVS 1469

Query: 2709 VIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWRRFI 2530
            V WFRVLVGNCRT+SDG IVELLGEASIVAL RMQR L   LV  PAYSIFAFVIW+  I
Sbjct: 1470 VNWFRVLVGNCRTVSDGFIVELLGEASIVALHRMQRMLSANLVFSPAYSIFAFVIWKP-I 1528

Query: 2529 LNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAAMLE 2350
            L+A+IV RED +QLYQ LT+AIGDAI+HLPFR++C RDTR  YD++  D  DSEF ++LE
Sbjct: 1529 LDASIVVREDFHQLYQLLTVAIGDAIRHLPFREICFRDTRCLYDLIAVDTLDSEFVSLLE 1588

Query: 2349 LSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLSQDDG-NRVSGQGESMVRYAENETKLLD 2173
             +G + + KA +FVPLR+RLFL+A+IDCKMP  + DG NR+SGQ E   +  EN  KL+ 
Sbjct: 1589 SNGSESNFKAASFVPLRSRLFLDALIDCKMPEIKLDGINRISGQVELKKQCGENVKKLIG 1648

Query: 2172 KLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKTAASEN 1993
            KL+HV+DTLQPAKFHWQW+ELRLLLNEQA+ EK+   D SL DAI S+SP+ DK+ ASEN
Sbjct: 1649 KLIHVLDTLQPAKFHWQWVELRLLLNEQAVNEKMMENDISLTDAIRSISPHSDKSTASEN 1708

Query: 1992 ENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRKSIRQR 1813
            E+NF++IILTRLLVRPDAAPLF+E VHL G+ LEDSML QAKW L G +VL+G+KSIRQ+
Sbjct: 1709 ESNFVQIILTRLLVRPDAAPLFSEAVHLLGKSLEDSMLSQAKWLLRGAEVLYGKKSIRQK 1768

Query: 1812 LINIA-ESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTDLKSH 1636
            ++NIA E K LS K Q+ +PWGWC+++ + AT K DK K EA  LEEGEVVE+G      
Sbjct: 1769 VMNIAAELKELSLKPQYWRPWGWCHADPNPATKKGDKWKSEAGVLEEGEVVEEGAIPIQF 1828

Query: 1635 GRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIEQQMN 1456
            G+G     DVEG  VSQQH+TERALIEL+LPC+DQ SDD RN FAS++IKQM+NIEQQ+N
Sbjct: 1829 GKGYGPS-DVEGFIVSQQHLTERALIELILPCVDQGSDDLRNNFASEMIKQMSNIEQQIN 1887

Query: 1455 AVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARRPTGVVDIVPASPAALRASMS 1276
            A+TRG  K + T T  I    NK  +RK+ + GSPG++R+ TG  D VP SPAALRASM+
Sbjct: 1888 AITRGVGKISVTSTPAIGSPANKSGSRKSGKTGSPGISRQSTGSADTVPPSPAALRASMT 1947

Query: 1275 LRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSSLLKRX 1096
            LRLQFL+RLLP+ICADREPS RNM+H  ASVILRLLGSRVVHED+    +    S   + 
Sbjct: 1948 LRLQFLLRLLPIICADREPSGRNMKHALASVILRLLGSRVVHEDSCHFVNTAFVS--SKR 2005

Query: 1095 XXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKDFPVFD 916
                          LSGES            LSSY+PSWLK+K  SK   E  KD+ VFD
Sbjct: 2006 DVESPMEASSAATLLSGESLFDCLLLVLHVLLSSYQPSWLKMKSESK-PNESNKDYAVFD 2064

Query: 915  REVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQPSISF 736
            RE+AESLQN+LD MQLP+ IRWRIQ+AMPIL PSVR S+SCQPPSVSP ALA L PS   
Sbjct: 2065 RELAESLQNDLDRMQLPETIRWRIQTAMPILIPSVRCSVSCQPPSVSPTALACLHPSNPV 2124

Query: 735  SGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSVPSSSN 556
            + LNP NSN  Q+NP    R A SV  KTK    QQ+LD EID WTLLEDGAGS   S N
Sbjct: 2125 ALLNPSNSNPPQKNPVLPGRAATSV--KTKSHMSQQELDSEIDQWTLLEDGAGSGQLSPN 2182

Query: 555  TATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            +A I G DHANL+AS++LKG VRVRRTDL YIGAVD+DS
Sbjct: 2183 SAGIGGSDHANLKASNFLKGAVRVRRTDLTYIGAVDEDS 2221


>gb|KJB38928.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
          Length = 2231

 Score = 2080 bits (5390), Expect = 0.0
 Identities = 1131/1904 (59%), Positives = 1365/1904 (71%), Gaps = 39/1904 (2%)
 Frame = -3

Query: 6033 QEPSPGGSDLVDNSRRAYTTSALVEMLRYLILAVPDTFVALDCFPLPPCVVSHVVNDGSF 5854
            +EPSPGGSDLVDNSRRAYT SALVEMLRYLI A PDTFVALDCFPLP CV+SH  +DG F
Sbjct: 381  REPSPGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCVLSHTPSDGGF 440

Query: 5853 ISKVDEDAVKMKNGLVEVGTLFRDKGLEAQYQSLSIGHAVSSIQKRADNLAMAARPGNPG 5674
            +SK  +DA K KN   +   + R KG ++QYQSLS  H VS+++KRADNLA  A  G P 
Sbjct: 441  LSKPSDDAAK-KNYTADAYAV-RGKGFDSQYQSLSFNHVVSTVEKRADNLAKGATAGYPS 498

Query: 5673 RNMAKAVQELDKALIQGDVRMAYRFLFEDLCD-CVDEGWTAEVNPCLRSSMKWIGTVTLS 5497
            +++AKAVQ LDKAL+QGDV  AY+ +F DL D  V EGW AEV+P LRSS+KW+ TV LS
Sbjct: 499  QSVAKAVQTLDKALLQGDVIDAYKHIFNDLYDGAVGEGWVAEVSPSLRSSLKWLQTVNLS 558

Query: 5496 FVCSLFFLCEWATCDFRDFRTALPHGLKFTGRKDFSQLYIAIRLLKLTKRDMQGSLPCKN 5317
             +CS+FFLCEWATCD+RDFRTA P  +KFTG KDFSQ+Y+AI+LLKL  +++Q       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPSDVKFTGSKDFSQIYLAIQLLKLKMKELQ------- 611

Query: 5316 KNVRGVNSFIKGPGQMNNYFGWTSIGNNYELKNNLKSVDGKNKEFSDLFQSPGPLHDIVV 5137
            K ++   +  K   Q N+Y     +G+ +E K+N K ++G+ + FSD+F SPGPLHDI+V
Sbjct: 612  KKLKKGRASRKNTSQQNSYSSKDLLGDTHEAKSNGKGLNGRRRNFSDIFDSPGPLHDIIV 671

Query: 5136 CWIDQHEAQNGEGFKRLQLLITELTRSGIFYPQAYVRQLIVGGIMDRNGPLADLDRWKRH 4957
            CWIDQHE   GEG KRLQL + EL RSGIFYPQAYVRQL+V GI+D NGP+ADL+R KRH
Sbjct: 672  CWIDQHEGHKGEGSKRLQLFMLELIRSGIFYPQAYVRQLLVSGIIDTNGPMADLNRRKRH 731

Query: 4956 CKILKQLPGPYVRDALEEARITEVPILSEVIHVYSNERRLVLQG-FHDHHKSPNSAKSSS 4780
             +ILKQLPG ++ +ALEEARI E   L E I+VYSNER LVLQ  F D + + N++ + +
Sbjct: 732  QRILKQLPGQFMLNALEEARIAEGSELLEAINVYSNERLLVLQELFFDSYNNTNNSHALA 791

Query: 4779 KEQKHHPTSMWEGASPASVDQWKAFQSASASLSGKTVYRGADLEELKAAIXXXXXXXXXX 4600
            K+    PT   +  S  S D+ +  Q++      KT  R   LEELKA+I          
Sbjct: 792  KKLNCRPTLGRDVDSQVSCDKRRTVQAS------KTFRREVGLEELKASISVLLQFPSSS 845

Query: 4599 XXXXXXXXXXXXXQGSVKRPVLSISNKTELGEGSPGCEECNTVKRQKLSEEKSSYLQGFS 4420
                          GS+KR + S  +K +  EG+PGCE+C  VKR KLSE+++S L+ +S
Sbjct: 846  FCSADSGEDESQ--GSIKRSIGSTHSKMDSVEGTPGCEDCKRVKRLKLSEDETSCLKVYS 903

Query: 4419 PNLSDDEENWWVRKGLKS-ESFKVDPPLKPSKQVTRGRQKIVRKTQSLAQLAAARIEGSQ 4243
            P  SDD++ WWVRKG K+ E  KVDP LK +KQ +RGRQK VRKTQSLAQLAAARIE SQ
Sbjct: 904  PIPSDDDDTWWVRKGPKNLEGSKVDPLLKSTKQASRGRQKPVRKTQSLAQLAAARIEDSQ 963

Query: 4242 GASTSHVCDSRISCPHHRTGFEGEAKSVDGIRTNHCGDIVSIGKILKKLRFVEKKVITVW 4063
            GASTSHVCD++ISCPHHRT  E   K VDGIRT H  DI+SIG+ LK+LRFVEK+V+T+W
Sbjct: 964  GASTSHVCDNKISCPHHRTEVEN-LKPVDGIRTTHHADIISIGRGLKQLRFVEKRVVTIW 1022

Query: 4062 LITVVRQLVEENEKTAAKVSQYSRPFPAVSDKSSVRWKLGEDELSAILYLMDVSDDLVSA 3883
            L++VVRQLVEE+EK+  K SQY RPF A  +KS +RWKLGEDELSAILYL+DVS D  SA
Sbjct: 1023 LLSVVRQLVEESEKSVPKASQYGRPFVAADEKSPLRWKLGEDELSAILYLLDVSCDSASA 1082

Query: 3882 VRFLLWLLPKILTSPNSTVSSGRTMLMLPRNVGSQLCEVGESFLLSSIRRYENILVAADL 3703
            V+FLLWLLPK +++P+  +  GR +LM+PRNV +  CEVGE++LLSS+RRYENIL+AADL
Sbjct: 1083 VKFLLWLLPKAISNPSPAIHGGRNILMVPRNVENYACEVGEAYLLSSLRRYENILIAADL 1142

Query: 3702 IPDTLSAAMHRAATIMASNGRVSGSAAFVYARYLLKKFSNVASVVDWEKNFKTTCDKRLI 3523
            +P+ LSA M   A+ MA+NGR++GS A V+A YLL+++ ++ASV++WEKNFK TCDKRL+
Sbjct: 1143 VPEALSATMRHVASFMATNGRITGSGALVFACYLLRRYGSIASVIEWEKNFKETCDKRLL 1202

Query: 3522 SELESRRSLDGEFGCPLGVPAGVEDLDDFLRQKISSARVSRVGLSMRDLVQRHVEEAFQF 3343
            SELES R+ +GEFG P GVPAG ED DD+ RQ+I+  R+SR G+SMRD+VQR +++   +
Sbjct: 1203 SELESGRT-EGEFGFPHGVPAGTEDPDDYCRQRINVGRLSRAGVSMRDMVQRRIDDVLHY 1261

Query: 3342 FSGKERKLFVPGTVKGPALEKWDDGYQIAQQIVIGLMDCFRQTGGAAQEGDPXXXXXXXX 3163
              GKERK F   T + PA EK DD YQ+AQQI++GLMDCFRQTGGA QEGDP        
Sbjct: 1262 ILGKERKHFAANTQRSPATEKGDDDYQVAQQIIMGLMDCFRQTGGAFQEGDPGLVSSAVS 1321

Query: 3162 XXXXXVGLFIAK-----PSSTVP--------LDYARRILRIHITCLCLLKEALGERQSRV 3022
                 VG  +AK       ST          L++A+R+L IH+ CLCLLKEALGER+S+ 
Sbjct: 1322 AIVSNVGPTLAKIPDFTSGSTYSNYQPPMNYLNFAKRLLHIHLICLCLLKEALGERKSQA 1381

Query: 3021 FEIALATEASSALAQVIAPGKAPRTQFQLSPETHDSNA-------------------KTT 2899
            FEIALATEA SALA   AP K+ R Q  LSP++ DS+A                   K  
Sbjct: 1382 FEIALATEAFSALAVAFAPAKSSRGQL-LSPDSLDSHANISNDNSHSSAKATLGRTTKMA 1440

Query: 2898 XXXXXXXXXXXXXXXXXLERMVTVFRLKEGIDLIQFMXXXXXXXXXXXXXXXGFKVDNLV 2719
                             LERMV+V RLKEG+D++QF+                FKVDN V
Sbjct: 1441 AAVSALVIGAIIHGVISLERMVSVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKVDNSV 1500

Query: 2718 EVSVIWFRVLVGNCRTISDGLIVELLGEASIVALSRMQRTLPLCLVLPPAYSIFAFVIWR 2539
            EV V  FR+ VGNCRT+ DGL++ELLGE S++ALSRMQR LP+ LV PPAY+IFAF+IW+
Sbjct: 1501 EVYVHLFRLFVGNCRTVCDGLVLELLGEQSVLALSRMQRLLPINLVFPPAYAIFAFMIWK 1560

Query: 2538 RFILNANIVTREDINQLYQSLTLAIGDAIKHLPFRDVCLRDTRGFYDIVVADANDSEFAA 2359
             FILN+N    EDI QLYQSLT+AIGDAIKH PFRDVC+RDTRGFYDIV AD  D+EFAA
Sbjct: 1561 PFILNSNTARSEDIQQLYQSLTVAIGDAIKHRPFRDVCMRDTRGFYDIVAADTTDAEFAA 1620

Query: 2358 MLELSGPDMHLKAMAFVPLRARLFLNAIIDCKMPLS---QDDGNRVSGQGESMVRYAENE 2188
            MLEL+G DMHLK+MAFVPLRARLFLNAIIDCKMP S   QDDGNRVSG  ES    AE  
Sbjct: 1621 MLELNGLDMHLKSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSESKALRAET- 1679

Query: 2187 TKLLDKLVHVIDTLQPAKFHWQWIELRLLLNEQALIEKLEARDTSLADAICSLSPNPDKT 2008
            +KLLDKLV  +DT+QPAKFHWQW+ELRLLLNEQALI+K+E  D S+ DAI S SP+ ++ 
Sbjct: 1680 SKLLDKLVCALDTIQPAKFHWQWVELRLLLNEQALIDKIENHDMSIVDAIRSSSPSSERA 1739

Query: 2007 AASENENNFIEIILTRLLVRPDAAPLFAEVVHLFGRPLEDSMLLQAKWFLGGQDVLFGRK 1828
              SE+E  FIEIILTRLLVRPDAAPLF+EVVHLFGR LEDSML+QAKWFLGG DVL GRK
Sbjct: 1740 TPSESEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSMLMQAKWFLGGLDVLLGRK 1799

Query: 1827 SIRQRLINIAESKGLSTKAQFRKPWGWCYSNFDIATNKVDKCKFEATSLEEGEVVEDGTD 1648
            ++RQRL NIAE+K LSTK+QF KPWGW YS  D  TN  +K K E TSLEEGEV+E+G +
Sbjct: 1800 TVRQRLSNIAENKNLSTKSQFWKPWGWSYSGVDPVTNSGEKRKSEVTSLEEGEVIEEGME 1859

Query: 1647 LKSHGRGSTQVLDVEGVNVSQQHVTERALIELVLPCIDQSSDDSRNTFASDLIKQMNNIE 1468
             K   +GSTQV D+EG  ++QQHVTE+A IELV+PCIDQSS DS NTFASDLIKQ N IE
Sbjct: 1860 SKGCVKGSTQV-DIEGSGINQQHVTEKAFIELVIPCIDQSSADSHNTFASDLIKQFNTIE 1918

Query: 1467 QQMNAVTRGASKQAGTVTSGIEGTGNKGNNRKAMRGGSPGLARR-PTGVVDIVPASPAAL 1291
            QQ+N+VTRG SKQ GT +SGIEG  NK NNRK +RGGSPGLA+R P  V    P SPAAL
Sbjct: 1919 QQINSVTRGVSKQTGTASSGIEGPTNKINNRKGIRGGSPGLAKRTPAPVESAPPPSPAAL 1978

Query: 1290 RASMSLRLQFLMRLLPVICADREPSSRNMRHLFASVILRLLGSRVVHEDADQSFSLTMSS 1111
            RASMSL               REPS+R+MR++ ASVILRLLGSRVVHED D      +SS
Sbjct: 1979 RASMSL---------------REPSARSMRNMLASVILRLLGSRVVHEDVD------LSS 2017

Query: 1110 LLKRXXXXXXXXXXXXXVDLSGESXXXXXXXXXXXXLSSYRPSWLKLKPSSKLTAECTKD 931
             L +              ++SG+S            LSS +PSWLK K +        KD
Sbjct: 2018 NLAQLKRDMELMPVVASTEMSGDSLFDRLLLVLHGLLSSCKPSWLKSKDA--------KD 2069

Query: 930  FPVFDREVAESLQNELDHMQLPDAIRWRIQSAMPILFPSVRWSISCQPPSVSPAALASLQ 751
            F  FDRE  E LQNELD MQLP+ IRWRIQ+AMPILFPS   ++SCQPPSV   AL+ LQ
Sbjct: 2070 FSGFDREAVEGLQNELDSMQLPEMIRWRIQAAMPILFPSFHNTVSCQPPSVPIGALSLLQ 2129

Query: 750  PSISFSGLNPGNSNLAQRNPASLARTANSVAGKTKPLPIQQDLDMEIDPWTLLEDGAGSV 571
            PSI   G   G  N +QR  AS AR AN++ GK+K + + Q+ DMEIDPWTLLE GAGS 
Sbjct: 2130 PSICVPGSYTGTINPSQRQVAS-ARNANNMPGKSKSV-LSQENDMEIDPWTLLEYGAGSG 2187

Query: 570  PSSSNTATISGGDHANLRASSWLKGCVRVRRTDLAYIGAVDDDS 439
            PSSS+TA I G D+ANLRASSWLKG VRVRRTD +YIGAVDDDS
Sbjct: 2188 PSSSSTAAIGGSDNANLRASSWLKGAVRVRRTDPSYIGAVDDDS 2231