BLASTX nr result

ID: Coptis25_contig00046198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046198
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313973.1| hypothetical protein POPTRDRAFT_202477 [Popu...   128   4e-28
ref|XP_002278362.1| PREDICTED: uncharacterized protein At5g39865...   127   1e-27
ref|XP_004143166.1| PREDICTED: uncharacterized protein At5g39865...   126   2e-27
ref|XP_002298493.1| hypothetical protein POPTRDRAFT_549440 [Popu...   124   8e-27
ref|XP_002276361.1| PREDICTED: uncharacterized protein At5g39865...   119   3e-25

>ref|XP_002313973.1| hypothetical protein POPTRDRAFT_202477 [Populus trichocarpa]
           gi|224105903|ref|XP_002313974.1| hypothetical protein
           POPTRDRAFT_202483 [Populus trichocarpa]
           gi|222850381|gb|EEE87928.1| hypothetical protein
           POPTRDRAFT_202477 [Populus trichocarpa]
           gi|222850382|gb|EEE87929.1| hypothetical protein
           POPTRDRAFT_202483 [Populus trichocarpa]
          Length = 153

 Score =  128 bits (322), Expect = 4e-28
 Identities = 53/74 (71%), Positives = 64/74 (86%)
 Frame = +1

Query: 1   GGAEEVRTLHETGELKKIVEGFPTVEPGVCDHCGGYRFVLCDQCNGSHKCFIEKGGFRSC 180
           GGAEE+R L+E+GELKK +EG P V+ GVCD CGGYRF+LC QC+GSHK +IEK GF+SC
Sbjct: 80  GGAEEIRQLNESGELKKFIEGLPVVDSGVCDVCGGYRFILCGQCSGSHKLYIEKAGFKSC 139

Query: 181 SFCNENGLIKCPSC 222
           + CNENGLI+CPSC
Sbjct: 140 TACNENGLIRCPSC 153


>ref|XP_002278362.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]
           gi|297745854|emb|CBI15910.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 3/78 (3%)
 Frame = +1

Query: 1   GGAEEVRTLHETGELKKIVEGFPTVEPGVCDHCGGYRFVLCDQCNGSHKCFIEKG---GF 171
           GGAEE+R LHE GELKK VEG P  E GVC+ CGGY F+LC +CNGSHKC+ EKG   GF
Sbjct: 165 GGAEEIRQLHEIGELKKFVEGLPAAESGVCEMCGGYGFILCHECNGSHKCYSEKGDTIGF 224

Query: 172 RSCSFCNENGLIKCPSCT 225
           RSC+ CNENGLI+CPSC+
Sbjct: 225 RSCTDCNENGLIRCPSCS 242


>ref|XP_004143166.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449519324|ref|XP_004166685.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 259

 Score =  126 bits (316), Expect = 2e-27
 Identities = 51/75 (68%), Positives = 63/75 (84%)
 Frame = +1

Query: 1   GGAEEVRTLHETGELKKIVEGFPTVEPGVCDHCGGYRFVLCDQCNGSHKCFIEKGGFRSC 180
           GGAEE+R LHE GELKK++EG PT + GVC+ CGGYRF+LC+ CNGSHK F EK GF++C
Sbjct: 180 GGAEEIRQLHEIGELKKLIEGLPTADSGVCEVCGGYRFILCEDCNGSHKLFTEKSGFKTC 239

Query: 181 SFCNENGLIKCPSCT 225
           + CNENGLI+C SC+
Sbjct: 240 TTCNENGLIRCHSCS 254


>ref|XP_002298493.1| hypothetical protein POPTRDRAFT_549440 [Populus trichocarpa]
           gi|222845751|gb|EEE83298.1| hypothetical protein
           POPTRDRAFT_549440 [Populus trichocarpa]
          Length = 253

 Score =  124 bits (311), Expect = 8e-27
 Identities = 52/74 (70%), Positives = 62/74 (83%)
 Frame = +1

Query: 1   GGAEEVRTLHETGELKKIVEGFPTVEPGVCDHCGGYRFVLCDQCNGSHKCFIEKGGFRSC 180
           GGAEE R L+E+GELKKI+EG P  + GVC+ C GYRF+LC QCNGSHK +IEK GF+SC
Sbjct: 178 GGAEETRQLNESGELKKIIEGLPVADSGVCEVCCGYRFILCGQCNGSHKLYIEKAGFKSC 237

Query: 181 SFCNENGLIKCPSC 222
           + CNENGLI+CPSC
Sbjct: 238 TACNENGLIRCPSC 251


>ref|XP_002276361.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]
          Length = 239

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/75 (69%), Positives = 62/75 (82%)
 Frame = +1

Query: 1   GGAEEVRTLHETGELKKIVEGFPTVEPGVCDHCGGYRFVLCDQCNGSHKCFIEKGGFRSC 180
           GGAEE+R LHETGELKK++ GFP V  GVCD CGGYRF+LC+ C+GS K + EK GFR C
Sbjct: 162 GGAEEIRQLHETGELKKLLGGFP-VAAGVCDECGGYRFMLCENCDGSRKVYSEKTGFRIC 220

Query: 181 SFCNENGLIKCPSCT 225
           + CNENGLI+CPSC+
Sbjct: 221 TACNENGLIRCPSCS 235


Top