BLASTX nr result

ID: Coptis25_contig00046195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046195
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610007.1| Extracellular ribonuclease [Medicago truncat...   119   8e-29
ref|XP_002318343.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-28
ref|XP_003543727.1| PREDICTED: extracellular ribonuclease-like [...   123   1e-26
emb|CBI17871.3| unnamed protein product [Vitis vinifera]              112   3e-26
emb|CAN79602.1| hypothetical protein VITISV_012634 [Vitis vinifera]   112   3e-26

>ref|XP_003610007.1| Extracellular ribonuclease [Medicago truncatula]
           gi|355511062|gb|AES92204.1| Extracellular ribonuclease
           [Medicago truncatula]
          Length = 383

 Score =  119 bits (297), Expect(2) = 8e-29
 Identities = 55/80 (68%), Positives = 60/80 (75%)
 Frame = -3

Query: 274 EHLWPRSYGLTKGPSLTDLHNIRPADXXXXXXXXNSSRGNKYYGECLANSNDCMKPANKE 95
           EHLWPRSYGLT  PSLTDLHNIRPAD        NSSRGNKYYGEC+  S  C++PANKE
Sbjct: 185 EHLWPRSYGLTTVPSLTDLHNIRPADVNGKGKDMNSSRGNKYYGECITGSTKCLRPANKE 244

Query: 94  AAYDTETNKMRWAPPSQKIG 35
           AA DTE +K RWAPP +  G
Sbjct: 245 AALDTEADKRRWAPPKEVRG 264



 Score = 33.1 bits (74), Expect(2) = 8e-29
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = -2

Query: 56  TTFAENREMGLLSTLLEW 3
           T   ENREMGLLSTLLEW
Sbjct: 293 TPNVENREMGLLSTLLEW 310


>ref|XP_002318343.1| predicted protein [Populus trichocarpa] gi|222859016|gb|EEE96563.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  119 bits (297), Expect(2) = 3e-28
 Identities = 57/82 (69%), Positives = 62/82 (75%)
 Frame = -3

Query: 280 SGEHLWPRSYGLTKGPSLTDLHNIRPADXXXXXXXXNSSRGNKYYGECLANSNDCMKPAN 101
           SGEHLWPRSYGL  GPSLTDLHNIRPAD         SSRGNKYYGEC   S  C+KPAN
Sbjct: 18  SGEHLWPRSYGLISGPSLTDLHNIRPADVNVN-----SSRGNKYYGECNKKSIRCLKPAN 72

Query: 100 KEAAYDTETNKMRWAPPSQKIG 35
           KEAA+DTET+K RW PP++  G
Sbjct: 73  KEAAFDTETDKERWTPPTKVRG 94



 Score = 31.2 bits (69), Expect(2) = 3e-28
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -2

Query: 44  ENREMGLLSTLLEW 3
           ENREMGLLSTLL+W
Sbjct: 126 ENREMGLLSTLLKW 139


>ref|XP_003543727.1| PREDICTED: extracellular ribonuclease-like [Glycine max]
          Length = 302

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/80 (72%), Positives = 64/80 (80%)
 Frame = -3

Query: 274 EHLWPRSYGLTKGPSLTDLHNIRPADXXXXXXXXNSSRGNKYYGECLANSNDCMKPANKE 95
           EHLWPRSYGLTKGPSLTDLHNIRPAD         SSRGNKYYGEC+ +S+ C++PANKE
Sbjct: 193 EHLWPRSYGLTKGPSLTDLHNIRPADVNVN-----SSRGNKYYGECITSSSKCLRPANKE 247

Query: 94  AAYDTETNKMRWAPPSQKIG 35
           AA DTET+K RWAPP Q  G
Sbjct: 248 AALDTETDKERWAPPMQVRG 267


>emb|CBI17871.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  112 bits (281), Expect(2) = 3e-26
 Identities = 55/80 (68%), Positives = 58/80 (72%)
 Frame = -3

Query: 274 EHLWPRSYGLTKGPSLTDLHNIRPADXXXXXXXXNSSRGNKYYGECLANSNDCMKPANKE 95
           EHLWPRSYGL   PSLTDLHNIRPAD         SSRGNKYYGEC   SN C+KPANKE
Sbjct: 123 EHLWPRSYGLIDHPSLTDLHNIRPADVNVN-----SSRGNKYYGECGVKSNKCLKPANKE 177

Query: 94  AAYDTETNKMRWAPPSQKIG 35
           AA DTET+K +W PP Q  G
Sbjct: 178 AASDTETDKEKWTPPLQVRG 197



 Score = 30.8 bits (68), Expect(2) = 3e-26
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -2

Query: 41  NREMGLLSTLLEW 3
           NREMGLLSTLLEW
Sbjct: 231 NREMGLLSTLLEW 243


>emb|CAN79602.1| hypothetical protein VITISV_012634 [Vitis vinifera]
          Length = 339

 Score =  112 bits (281), Expect(2) = 3e-26
 Identities = 55/80 (68%), Positives = 58/80 (72%)
 Frame = -3

Query: 274 EHLWPRSYGLTKGPSLTDLHNIRPADXXXXXXXXNSSRGNKYYGECLANSNDCMKPANKE 95
           EHLWPRSYGL   PSLTDLHNIRPAD         SSRGNKYYGEC   SN C+KPANKE
Sbjct: 166 EHLWPRSYGLIDHPSLTDLHNIRPADVNVN-----SSRGNKYYGECGVKSNKCLKPANKE 220

Query: 94  AAYDTETNKMRWAPPSQKIG 35
           AA DTET+K +W PP Q  G
Sbjct: 221 AASDTETDKEKWTPPLQVRG 240



 Score = 30.8 bits (68), Expect(2) = 3e-26
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -2

Query: 41  NREMGLLSTLLEW 3
           NREMGLLSTLLEW
Sbjct: 274 NREMGLLSTLLEW 286


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