BLASTX nr result

ID: Coptis25_contig00044930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044930
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21002.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264...    75   7e-12
ref|XP_002324847.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...    68   7e-10
ref|XP_002309608.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = -1

Query: 323 SQLPEKVDAVASPQYMLGEICMHGSQYNQISIF-NTERGEPKGDVGCFVNRSVDCNDTES 147
           S L  KVDAVA P+  LGE  MH S  ++ + +   ERG+P G V CF+ RS + ND++S
Sbjct: 231 SPLRAKVDAVAYPRLNLGEKYMHASFNDRSTKYCEMERGKPNG-VDCFLARSSESNDSDS 289

Query: 146 SICSVGSCSINSNIPYRSSHCSLKNP 69
             CSVGSCSIN+N P + S C L +P
Sbjct: 290 MSCSVGSCSINNNGPNKFSSCILAHP 315


>ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera]
          Length = 440

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = -1

Query: 323 SQLPEKVDAVASPQYMLGEICMHGSQYNQISIF-NTERGEPKGDVGCFVNRSVDCNDTES 147
           S L  KVDAVA P+  LGE  MH S  ++ + +   ERG+P G V CF+ RS + ND++S
Sbjct: 231 SPLRAKVDAVAYPRLNLGEKYMHASFNDRSTKYCEMERGKPNG-VDCFLARSSESNDSDS 289

Query: 146 SICSVGSCSINSNIPYRSSHCSLKNP 69
             CSVGSCSIN+N P + S C L +P
Sbjct: 290 MSCSVGSCSINNNGPNKFSSCILAHP 315


>ref|XP_002324847.1| predicted protein [Populus trichocarpa] gi|222866281|gb|EEF03412.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -1

Query: 308 KVDAVASPQYMLGEICMHGSQYNQ-ISIFNTERGEPKGDVGCFVNRSVDCNDTESSICSV 132
           KVDAVA P+  LGEI MHGS  NQ I     ER  P   V  F  RS + ND++S  CSV
Sbjct: 222 KVDAVAYPRECLGEIYMHGSSNNQTIGSCEMERRTPNNFVNSFCGRSSESNDSDSDACSV 281

Query: 131 GSCSINSNIPYRSSHC 84
           GSCS+NS+ P R  +C
Sbjct: 282 GSCSVNSDSPDRLFNC 297


>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = -1

Query: 323 SQLPEKVDAVASPQYMLGEICMHGSQYNQ---ISIFNTERGEPKGDVGCFVNRSVDCNDT 153
           S LPEKV+AVASP+ MLGE  MH S  ++    S  + ER +  G VG     S+  ND 
Sbjct: 234 SLLPEKVEAVASPREMLGENYMHASFNSRPTGYSEMDVERAKTNGAVGGSHAVSLGHNDA 293

Query: 152 ESSICSVGSCSINSNIPYRSSH 87
           +S  CSVGSCSI SN PY+  H
Sbjct: 294 DSVTCSVGSCSITSNNPYKLLH 315


>ref|XP_002309608.1| predicted protein [Populus trichocarpa] gi|222855584|gb|EEE93131.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -1

Query: 323 SQLPEKVDAVASPQYMLGEICMHGSQYNQ-ISIFNTERGEPKGDVGCFVNRSVDCNDTES 147
           S   +KVDAVA P+  LGEI MH S  NQ I  +  +RG P   V     RS++ ND++S
Sbjct: 217 SSFLKKVDAVAYPRECLGEIYMHASSNNQTIGSYEMQRGTPNYVVDS-CGRSLEPNDSDS 275

Query: 146 SICSVGSCSINSNIPYR 96
             CS+GSCS+ S+ P R
Sbjct: 276 DACSIGSCSVTSDCPNR 292


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