BLASTX nr result

ID: Coptis25_contig00044900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044900
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265136.2| PREDICTED: uncharacterized protein LOC100246...   172   2e-41
ref|XP_002299081.1| tir-nbs resistance protein [Populus trichoca...   160   8e-38
ref|XP_002864442.1| nucleoside-triphosphatase/ nucleotide bindin...   143   1e-32
ref|XP_002862739.1| hypothetical protein ARALYDRAFT_497314 [Arab...   143   1e-32
ref|NP_200433.1| nucleoside-triphosphatase/ nucleotide binding p...   142   2e-32

>ref|XP_002265136.2| PREDICTED: uncharacterized protein LOC100246258 [Vitis vinifera]
          Length = 985

 Score =  172 bits (437), Expect = 2e-41
 Identities = 90/142 (63%), Positives = 107/142 (75%), Gaps = 1/142 (0%)
 Frame = +2

Query: 5    LLSELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSD 184
            LLSELAISP VLFEAVN VP  + S   +LS +D++FC+NNPFLMK++ FC SVL+QT+ 
Sbjct: 634  LLSELAISPSVLFEAVNQVPLNEGSNCSNLSILDQQFCRNNPFLMKVLGFCFSVLQQTNG 693

Query: 185  RKNLLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWTECLRMAF-XXXXXXXX 361
            ++NLLASRMLL GAWFA AP S  LLA AA +IP+T NR RKWT+CL +A          
Sbjct: 694  KRNLLASRMLLVGAWFATAPVSANLLATAANHIPTTGNRLRKWTKCLSLALCCCSGCSFS 753

Query: 362  XQTRKSEVDSALLLVKLGLAKR 427
             QT KSE DSALLLVKLGLA+R
Sbjct: 754  PQTWKSEEDSALLLVKLGLARR 775


>ref|XP_002299081.1| tir-nbs resistance protein [Populus trichocarpa]
            gi|222846339|gb|EEE83886.1| tir-nbs resistance protein
            [Populus trichocarpa]
          Length = 996

 Score =  160 bits (406), Expect = 8e-38
 Identities = 85/141 (60%), Positives = 101/141 (71%)
 Frame = +2

Query: 5    LLSELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSD 184
            LLSELAISP  LFEAVN VP ED S    +S  DE +CK+NPFLMK+++F   +L+QT  
Sbjct: 648  LLSELAISPCALFEAVNQVPLEDGSTYSYMSMSDEHYCKSNPFLMKLLHFSFIILQQTDG 707

Query: 185  RKNLLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWTECLRMAFXXXXXXXXX 364
            RKNLLA RMLL GAWFAPAP S TLLA AAKN+P+  N FRKWT+C+ +AF         
Sbjct: 708  RKNLLALRMLLVGAWFAPAPISATLLATAAKNMPAIGNGFRKWTKCVSLAFSCCSGCGL- 766

Query: 365  QTRKSEVDSALLLVKLGLAKR 427
               +SE D+A LLVKLGLA+R
Sbjct: 767  -APQSEEDAATLLVKLGLARR 786


>ref|XP_002864442.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
            lyrata subsp. lyrata] gi|297310277|gb|EFH40701.1|
            nucleoside-triphosphatase/ nucleotide binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 972

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/142 (52%), Positives = 97/142 (68%)
 Frame = +2

Query: 5    LLSELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSD 184
            LLSELAI P  LFEAVN +  E+ S +P L+ +DE++CK+NPF+ K++ F  +VL+Q   
Sbjct: 626  LLSELAIPPSALFEAVNKIQIEERSASPFLNVIDEQYCKSNPFVAKVLAFSLAVLEQAEG 685

Query: 185  RKNLLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWTECLRMAFXXXXXXXXX 364
             +NLL+ +MLL GAWFAP P  V LLAAAAKN+P+  NRF KW +CL   F         
Sbjct: 686  NRNLLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKWNKCLSHTFAWCGGCGLG 745

Query: 365  QTRKSEVDSALLLVKLGLAKRT 430
              R+SE D+A LLV+LGLA+ T
Sbjct: 746  --RRSEEDAAFLLVRLGLARIT 765


>ref|XP_002862739.1| hypothetical protein ARALYDRAFT_497314 [Arabidopsis lyrata subsp.
           lyrata] gi|297308443|gb|EFH38997.1| hypothetical protein
           ARALYDRAFT_497314 [Arabidopsis lyrata subsp. lyrata]
          Length = 741

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/142 (52%), Positives = 97/142 (68%)
 Frame = +2

Query: 5   LLSELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSD 184
           LLSELAI P  LFEAVN +  E+ S +P L+ +DE++CK+NPF+ K++ F  +VL+Q   
Sbjct: 395 LLSELAIPPSALFEAVNKIQIEERSASPFLNVIDEQYCKSNPFVAKVLAFSLAVLEQAEG 454

Query: 185 RKNLLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWTECLRMAFXXXXXXXXX 364
            +NLL+ +MLL GAWFAP P  V LLAAAAKN+P+  NRF KW +CL   F         
Sbjct: 455 NRNLLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKWNKCLSHTFAWCGGCGLG 514

Query: 365 QTRKSEVDSALLLVKLGLAKRT 430
             R+SE D+A LLV+LGLA+ T
Sbjct: 515 --RRSEEDAAFLLVRLGLARIT 534


>ref|NP_200433.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
            thaliana] gi|9758749|dbj|BAB09113.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|26449886|dbj|BAC42065.1| unknown protein [Arabidopsis
            thaliana] gi|28973201|gb|AAO63925.1| unknown protein
            [Arabidopsis thaliana] gi|332009353|gb|AED96736.1|
            nucleoside-triphosphatase/ nucleotide binding protein
            [Arabidopsis thaliana]
          Length = 973

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/142 (52%), Positives = 96/142 (67%)
 Frame = +2

Query: 5    LLSELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSD 184
            LLSELAI P  LFEAVN V  E+ S +P L+  DE++CK+NPF+ K++ F  +VL+Q   
Sbjct: 627  LLSELAILPSALFEAVNKVQIEERSASPFLNLNDEQYCKSNPFVAKVLAFSLAVLEQAEG 686

Query: 185  RKNLLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWTECLRMAFXXXXXXXXX 364
             +NLL+ +MLL GAWFAP P  V LLAAAAKN+P+  NRF KW +CL   F         
Sbjct: 687  NRNLLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKWNKCLSHTFAWCGGCGLG 746

Query: 365  QTRKSEVDSALLLVKLGLAKRT 430
              R+SE D+A LLV+LGLA+ T
Sbjct: 747  --RRSEEDAAFLLVRLGLARLT 766


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