BLASTX nr result

ID: Coptis25_contig00044597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044597
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002453646.1| hypothetical protein SORBIDRAFT_04g009830 [S...   105   4e-21
ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [S...   102   3e-20
emb|CBI17828.3| unnamed protein product [Vitis vinifera]              102   4e-20
emb|CAN64920.1| hypothetical protein VITISV_017199 [Vitis vinifera]    99   5e-19
ref|XP_002515374.1| glutamate receptor 2 plant, putative [Ricinu...    98   6e-19

>ref|XP_002453646.1| hypothetical protein SORBIDRAFT_04g009830 [Sorghum bicolor]
           gi|241933477|gb|EES06622.1| hypothetical protein
           SORBIDRAFT_04g009830 [Sorghum bicolor]
          Length = 882

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/91 (53%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 FHVGVILDLGTSVGKISDSCMSMAVSDFYATNDHYESRLVLHPKDSK-DVVSAVFSAVEL 95
           FH+GV+LDLGT+VGK++ + +S+AV DFY  + ++ +RLVLH +DSK D V A  + +EL
Sbjct: 31  FHIGVVLDLGTTVGKVAHTSISIAVEDFYTVHPNHTTRLVLHVRDSKSDDVQAASAVLEL 90

Query: 94  LDDVNVQVLVGPQRSMEAEFVAELGNKYQVP 2
           L++ NVQ ++GPQ+S +A FV+ LGN+YQVP
Sbjct: 91  LENYNVQAIIGPQKSSQAVFVSALGNRYQVP 121


>ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [Sorghum bicolor]
           gi|241925792|gb|EER98936.1| hypothetical protein
           SORBIDRAFT_02g025250 [Sorghum bicolor]
          Length = 873

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 FHVGVILDLGTSVGKISDSCMSMAVSDFYATNDHYESRLVLHPKDS-KDVVSAVFSAVEL 95
           FHVGV+LDLGT VGK++ + +S+AV DFYA + +Y +RLVLH +DS  D V A  + ++L
Sbjct: 31  FHVGVVLDLGTPVGKVARTSISIAVEDFYAVHPNYTTRLVLHVRDSMTDDVQAAAAVIDL 90

Query: 94  LDDVNVQVLVGPQRSMEAEFVAELGNKYQVP 2
           L++ NVQ ++GPQ S +A FV+ LGNK QVP
Sbjct: 91  LENYNVQAIIGPQNSSQAVFVSALGNKCQVP 121


>emb|CBI17828.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/91 (50%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 FHVGVILDLGTSVGKISDSCMSMAVSDFYATNDHYESRLVLHPKDSK-DVVSAVFSAVEL 95
           + +GV+LD+G+S+G+++++C+SMAVSDFY+ N HY++RLVLH +DS  + + A+ SA++L
Sbjct: 35  YGIGVVLDMGSSLGRMANNCISMAVSDFYSINRHYQTRLVLHTRDSMGEPLYALSSAIDL 94

Query: 94  LDDVNVQVLVGPQRSMEAEFVAELGNKYQVP 2
           L++ NV  ++GPQ S EAEF+ +LG+K +VP
Sbjct: 95  LENKNVHAILGPQTSEEAEFLVDLGDKARVP 125


>emb|CAN64920.1| hypothetical protein VITISV_017199 [Vitis vinifera]
          Length = 887

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/92 (48%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
 Frame = -2

Query: 274 SFHVGVILDLGTSVGKISDSCMSMAVSDFYATNDHYESRLVLHPKDSK-DVVSAVFSAVE 98
           ++ VGV+LD+G+S+G+++++C+SMAVSDFY+ N HY++RL+LH +DS  D + A+  A++
Sbjct: 34  AYGVGVVLDMGSSLGRMANNCISMAVSDFYSINRHYKTRLILHTRDSMGDPLYALSLAID 93

Query: 97  LLDDVNVQVLVGPQRSMEAEFVAELGNKYQVP 2
           LL++ +V  ++GPQ S EAEF+  LG+K +VP
Sbjct: 94  LLENKDVHAILGPQTSEEAEFLVHLGDKARVP 125


>ref|XP_002515374.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545318|gb|EEF46823.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 918

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/90 (54%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 HVGVILDLGTSVGKISDSCMSMAVSDFYATNDHYESRLVLHPKDSK-DVVSAVFSAVELL 92
           +VGV+LDL   VGK+  SC++MA+ DFYA+ +HY++RLVL+ +DSK DV+ A  +A++L+
Sbjct: 12  NVGVVLDLEDWVGKMELSCINMALLDFYASYNHYQTRLVLNIRDSKRDVIGAAAAALDLI 71

Query: 91  DDVNVQVLVGPQRSMEAEFVAELGNKYQVP 2
            +V VQ L+GP  SM+AEFV +LG K QVP
Sbjct: 72  KNVEVQALIGPSTSMQAEFVIDLGEKAQVP 101


Top