BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044328
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]   189   2e-46
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   182   2e-44
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   181   5e-44
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...   181   7e-44
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   178   5e-43

>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/130 (69%), Positives = 104/130 (80%)
 Frame = -3

Query: 392  VFSKIDLRLGYHQILVHKADIYKTAFRTHQGHYEFKVMPFGLTNTPATFQALMNDIFNPY 213
            +FSK+DLR GYHQI VH  DI KTAFRTH+GHYEF VMPFGLTN PATFQ+LMNDIF PY
Sbjct: 616  IFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNDIFKPY 675

Query: 212  LRKHVLVFFDDILVYNTTLEEHIVHLR*VLDTLRAHTLYAKYSKCTFAKPQQEYLGHLIT 33
            LRK +LVFFDDILVY+  L +H+ HL+ VLD L+ H L+AK SKC F   + EYLGHLI+
Sbjct: 676  LRKFILVFFDDILVYSKNLADHVYHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLIS 735

Query: 32   PTGVAADPSK 3
              GV ADP+K
Sbjct: 736  KDGVQADPTK 745


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/130 (66%), Positives = 103/130 (79%)
 Frame = -3

Query: 392  VFSKIDLRLGYHQILVHKADIYKTAFRTHQGHYEFKVMPFGLTNTPATFQALMNDIFNPY 213
            +FSK+DLR GYHQI VH  DI KTAFRTH+GHYEF V+PFGLTN P TFQ+LMNDIF PY
Sbjct: 649  IFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVIPFGLTNAPTTFQSLMNDIFKPY 708

Query: 212  LRKHVLVFFDDILVYNTTLEEHIVHLR*VLDTLRAHTLYAKYSKCTFAKPQQEYLGHLIT 33
            LRK +LVFF DILVY+ +L +H+ HL+ VLD L+ H L+AK SKC F   + EYLGHLI+
Sbjct: 709  LRKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLIS 768

Query: 32   PTGVAADPSK 3
              GV ADP+K
Sbjct: 769  KDGVQADPTK 778


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  181 bits (459), Expect = 5e-44
 Identities = 85/130 (65%), Positives = 103/130 (79%)
 Frame = -3

Query: 392  VFSKIDLRLGYHQILVHKADIYKTAFRTHQGHYEFKVMPFGLTNTPATFQALMNDIFNPY 213
            VFSK+DL+ GYHQI +  +D++KTAFRTH+GHYEF VMPFGLTN PATFQALMN++F PY
Sbjct: 708  VFSKLDLKSGYHQIKMKPSDVHKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNEVFKPY 767

Query: 212  LRKHVLVFFDDILVYNTTLEEHIVHLR*VLDTLRAHTLYAKYSKCTFAKPQQEYLGHLIT 33
            LRK VLVFFDDILVY+T+LE+H+ HL  VL  L  + L+A   KC F K +  YLGH+I+
Sbjct: 768  LRKFVLVFFDDILVYSTSLEQHMHHLNVVLGLLATNHLFANLKKCEFGKEEVAYLGHIIS 827

Query: 32   PTGVAADPSK 3
              GVA DPSK
Sbjct: 828  SKGVAMDPSK 837


>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/130 (63%), Positives = 102/130 (78%)
 Frame = -3

Query: 392 VFSKIDLRLGYHQILVHKADIYKTAFRTHQGHYEFKVMPFGLTNTPATFQALMNDIFNPY 213
           V+SKIDLR GYHQ+ +   DI+KTAF+TH GHYE+ VMPFGLTN PA+FQ+LMN  F P+
Sbjct: 128 VYSKIDLRAGYHQVRMDPLDIHKTAFKTHNGHYEYLVMPFGLTNAPASFQSLMNSFFKPF 187

Query: 212 LRKHVLVFFDDILVYNTTLEEHIVHLR*VLDTLRAHTLYAKYSKCTFAKPQQEYLGHLIT 33
           LRK VLVFFDDIL+Y+T++EEH  HL  V + +R H L+AK SKC FA P+ EYLGH I+
Sbjct: 188 LRKFVLVFFDDILIYSTSMEEHKKHLEAVFEVMRVHHLFAKMSKCAFAVPRVEYLGHFIS 247

Query: 32  PTGVAADPSK 3
             G+A DP+K
Sbjct: 248 GEGIATDPAK 257


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/130 (63%), Positives = 102/130 (78%)
 Frame = -3

Query: 392  VFSKIDLRLGYHQILVHKADIYKTAFRTHQGHYEFKVMPFGLTNTPATFQALMNDIFNPY 213
            +FSKIDLR GYHQ+ +   DI KTAF+TH GH+E+ VMPFGLTN PATFQ LMN IF P+
Sbjct: 686  IFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPF 745

Query: 212  LRKHVLVFFDDILVYNTTLEEHIVHLR*VLDTLRAHTLYAKYSKCTFAKPQQEYLGHLIT 33
            LRK VLVFFDDILVY+++LEEH  HL+ V + +RA+ L+AK SKC FA P+ EYLGH I+
Sbjct: 746  LRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFIS 805

Query: 32   PTGVAADPSK 3
              G+  DP+K
Sbjct: 806  AQGIETDPAK 815