BLASTX nr result

ID: Coptis25_contig00044305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044305
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532959.1| potassium channel tetramerization domain-con...   219   1e-55
ref|XP_002265573.2| PREDICTED: BTB/POZ domain-containing protein...   216   2e-54
ref|XP_002324540.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
emb|CAN80633.1| hypothetical protein VITISV_006158 [Vitis vinifera]   216   2e-54
ref|XP_004146683.1| PREDICTED: BTB/POZ domain-containing protein...   211   5e-53

>ref|XP_002532959.1| potassium channel tetramerization domain-containing protein,
           putative [Ricinus communis] gi|223527269|gb|EEF29425.1|
           potassium channel tetramerization domain-containing
           protein, putative [Ricinus communis]
          Length = 444

 Score =  219 bits (559), Expect = 1e-55
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = +3

Query: 3   YGLLDHVRAAKWGQFDGNRLRLGGSITGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 182
           YGLLDHVR+AKWG FDGNRLR   S+TGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWM+
Sbjct: 93  YGLLDHVRSAKWGPFDGNRLRHSRSVTGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWMM 152

Query: 183 EEHPPINLDYQRVNDVGWIDSENIVISACERLGRGDGGMGLFSSSNGELR 332
           EEHPPINLDYQRVNDVGWIDSEN+++SACERLGRGDGGMGLFS S GELR
Sbjct: 153 EEHPPINLDYQRVNDVGWIDSENVIVSACERLGRGDGGMGLFSKSTGELR 202


>ref|XP_002265573.2| PREDICTED: BTB/POZ domain-containing protein At2g24240 [Vitis
           vinifera]
          Length = 441

 Score =  216 bits (550), Expect = 2e-54
 Identities = 99/110 (90%), Positives = 103/110 (93%)
 Frame = +3

Query: 3   YGLLDHVRAAKWGQFDGNRLRLGGSITGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 182
           YGLLDH+R+AKWGQFDGNRLR   S+ GRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML
Sbjct: 90  YGLLDHIRSAKWGQFDGNRLRHSKSVMGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 149

Query: 183 EEHPPINLDYQRVNDVGWIDSENIVISACERLGRGDGGMGLFSSSNGELR 332
           EEHPPI+LDYQRVNDVGWID  NIVISACERLGRGDGGMGLFSSS GELR
Sbjct: 150 EEHPPIHLDYQRVNDVGWIDPGNIVISACERLGRGDGGMGLFSSSTGELR 199


>ref|XP_002324540.1| predicted protein [Populus trichocarpa] gi|222865974|gb|EEF03105.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  216 bits (550), Expect = 2e-54
 Identities = 96/110 (87%), Positives = 104/110 (94%)
 Frame = +3

Query: 3   YGLLDHVRAAKWGQFDGNRLRLGGSITGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 182
           YGLLDHVR+AKWGQFDGNRLR   S+TGRAPGDGTAIRAGPDGGCCVAHGS+VHVYDW++
Sbjct: 95  YGLLDHVRSAKWGQFDGNRLRHSRSVTGRAPGDGTAIRAGPDGGCCVAHGSVVHVYDWIM 154

Query: 183 EEHPPINLDYQRVNDVGWIDSENIVISACERLGRGDGGMGLFSSSNGELR 332
           EEHPP+NLDYQRVNDV W+DSENI+ISACERLGRGDGGMGLFS S GELR
Sbjct: 155 EEHPPLNLDYQRVNDVAWVDSENIIISACERLGRGDGGMGLFSKSTGELR 204


>emb|CAN80633.1| hypothetical protein VITISV_006158 [Vitis vinifera]
          Length = 441

 Score =  216 bits (550), Expect = 2e-54
 Identities = 99/110 (90%), Positives = 103/110 (93%)
 Frame = +3

Query: 3   YGLLDHVRAAKWGQFDGNRLRLGGSITGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 182
           YGLLDH+R+AKWGQFDGNRLR   S+ GRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML
Sbjct: 90  YGLLDHIRSAKWGQFDGNRLRHSKSVMGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 149

Query: 183 EEHPPINLDYQRVNDVGWIDSENIVISACERLGRGDGGMGLFSSSNGELR 332
           EEHPPI+LDYQRVNDVGWID  NIVISACERLGRGDGGMGLFSSS GELR
Sbjct: 150 EEHPPIHLDYQRVNDVGWIDPGNIVISACERLGRGDGGMGLFSSSTGELR 199


>ref|XP_004146683.1| PREDICTED: BTB/POZ domain-containing protein At2g24240-like isoform
           1 [Cucumis sativus] gi|449457897|ref|XP_004146684.1|
           PREDICTED: BTB/POZ domain-containing protein
           At2g24240-like isoform 2 [Cucumis sativus]
           gi|449519832|ref|XP_004166938.1| PREDICTED: BTB/POZ
           domain-containing protein At2g24240-like isoform 1
           [Cucumis sativus] gi|449519834|ref|XP_004166939.1|
           PREDICTED: BTB/POZ domain-containing protein
           At2g24240-like isoform 2 [Cucumis sativus]
          Length = 446

 Score =  211 bits (537), Expect = 5e-53
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = +3

Query: 3   YGLLDHVRAAKWGQFDGNRLRLGGSITGRAPGDGTAIRAGPDGGCCVAHGSMVHVYDWML 182
           YGL DH R+AKWGQFDGNRL+L  S TG+APGDGTAIRAGPDGGCC+AHGSMVHVYDWML
Sbjct: 90  YGLQDHFRSAKWGQFDGNRLKLSHSATGQAPGDGTAIRAGPDGGCCIAHGSMVHVYDWML 149

Query: 183 EEHPPINLDYQRVNDVGWIDSENIVISACERLGRGDGGMGLFSSSNGELR 332
           +EHPPINLDYQRVNDVGWID+ENIVIS CERLGRGDGGMG+F  S GELR
Sbjct: 150 DEHPPINLDYQRVNDVGWIDAENIVISVCERLGRGDGGMGMFCKSTGELR 199


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