BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042158
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...   182   2e-44
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...   182   2e-44
ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea ma...   179   3e-43
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S...   177   6e-43
ref|NP_001147118.1| replication protein A1 [Zea mays] gi|1956074...   176   1e-42

>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/125 (71%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
 Frame = +1

Query: 16  LGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVSVFNEQAEKIIGCSADELDKMKKD 195
           +GSGYWC  CQKN EE SLRYI+VVR+ D SG A+VS FNE+AE+I+GCSADELD++K  
Sbjct: 436 IGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQ 495

Query: 196 -GDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRITVRDLAPVDFVAESRFLLEEIS 372
            G+E SY LKLKEATW PH+F V V+Q +YNNEKRQRITVR +APVDF AESRFLLEEI+
Sbjct: 496 IGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIA 555

Query: 373 KMQDS 387
           KM+ S
Sbjct: 556 KMKAS 560


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/125 (71%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
 Frame = +1

Query: 16  LGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVSVFNEQAEKIIGCSADELDKMKKD 195
           +GSGYWC  CQKN EE SLRYI+VVR+ D SG A+VS FNE+AE+I+GCSADELD++K  
Sbjct: 479 IGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQ 538

Query: 196 -GDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRITVRDLAPVDFVAESRFLLEEIS 372
            G+E SY LKLKEATW PH+F V V+Q +YNNEKRQRITVR +APVDF AESRFLLEEI+
Sbjct: 539 IGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIA 598

Query: 373 KMQDS 387
           KM+ S
Sbjct: 599 KMKAS 603


>ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
           gi|194704722|gb|ACF86445.1| unknown [Zea mays]
           gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
           DNA-binding subunit [Zea mays]
           gi|413956552|gb|AFW89201.1| Replication protein A
           DNA-binding subunit [Zea mays]
          Length = 623

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/120 (70%), Positives = 102/120 (85%)
 Frame = +1

Query: 19  GSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVSVFNEQAEKIIGCSADELDKMKKDG 198
           GSGYWC GCQKN  E SLRYI+V+++ DP+G A+VSVFNE AEKIIGCSADELD+++K+ 
Sbjct: 501 GSGYWCEGCQKNYSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEE 560

Query: 199 DETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRITVRDLAPVDFVAESRFLLEEISKM 378
            + SY+LKLKEATW PH+F V VTQ +Y NEKRQRITVR  APVDF AES++LLEEI+K+
Sbjct: 561 GDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDFAAESKYLLEEIAKL 620


>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
           gi|241922132|gb|EER95276.1| hypothetical protein
           SORBIDRAFT_01g042890 [Sorghum bicolor]
          Length = 623

 Score =  177 bits (450), Expect = 6e-43
 Identities = 84/120 (70%), Positives = 102/120 (85%)
 Frame = +1

Query: 19  GSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVSVFNEQAEKIIGCSADELDKMKKDG 198
           GSGYWC GCQKN  E SLRYI+V++I DP+G A+VSVFNE AEKIIGCSADELD+++K+ 
Sbjct: 501 GSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEE 560

Query: 199 DETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRITVRDLAPVDFVAESRFLLEEISKM 378
            + SY+LKLKEATW PH+F V VTQ +Y NEKRQRITVR  APVD+ AES++LLEEI+K+
Sbjct: 561 GDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIAKL 620


>ref|NP_001147118.1| replication protein A1 [Zea mays] gi|195607412|gb|ACG25536.1|
           replication protein A 70 kDa DNA-binding subunit [Zea
           mays]
          Length = 618

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/120 (68%), Positives = 102/120 (85%)
 Frame = +1

Query: 19  GSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVSVFNEQAEKIIGCSADELDKMKKDG 198
           GSGYWC GCQKN  E SLRYI+V+++ DP+G A+VSVFNE AEKIIGCSADELD+++K+ 
Sbjct: 496 GSGYWCEGCQKNDSECSLRYIMVIKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEE 555

Query: 199 DETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRITVRDLAPVDFVAESRFLLEEISKM 378
            + SY+LKLKEATW PH+F V VTQ +YNNEKRQRITVR  APV+  AES++LLE+I+K+
Sbjct: 556 GDDSYVLKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAKL 615