BLASTX nr result

ID: Coptis25_contig00041625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041625
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60628.1| hypothetical protein VITISV_018875 [Vitis vinifera]    63   2e-08
emb|CAN65013.1| hypothetical protein VITISV_027352 [Vitis vinifera]    62   5e-08
emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]    61   8e-08
ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249...    59   5e-07
emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]    59   5e-07

>emb|CAN60628.1| hypothetical protein VITISV_018875 [Vitis vinifera]
          Length = 583

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 WRGG-LHL*IHFPNWD*VCLPKEEGGMSGKRVL*MNINLLGKWLG*YEEEEDHFWKKVAV 24
           W GG L   +H  NW+ VC  KE+GG+  +R+  +N  LLGKWL  +  EED  WKKV +
Sbjct: 226 WGGGSLERKVHLINWEAVCAQKEKGGLGIRRIARLNKVLLGKWLWRFAFEEDKLWKKVIM 285

Query: 23  DEYGDGG 3
           +++G  G
Sbjct: 286 EKFGQEG 292


>emb|CAN65013.1| hypothetical protein VITISV_027352 [Vitis vinifera]
          Length = 503

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 WRGG-LHL*IHFPNWD*VCLPKEEGGMSGKRVL*MNINLLGKWLG*YEEEEDHFWKKVAV 24
           W GG L   IH  NW+ VC  KE+GG+  +R+  +N  LLGKWL  +  E+D  WKKV +
Sbjct: 15  WGGGSLERKIHLINWEVVCAQKEKGGLGIRRIALLNKVLLGKWLWRFAFEKDKLWKKVIM 74

Query: 23  DEYGDGG 3
           +++G  G
Sbjct: 75  EKFGQEG 81


>emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]
          Length = 1894

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200  WRGG-LHL*IHFPNWD*VCLPKEEGGMSGKRVL*MNINLLGKWLG*YEEEEDHFWKKVAV 24
            W GG L   +H  NW  VC PKEEGG+  +++  +N  LLGKW+  Y  E+D+ WKK   
Sbjct: 1562 WGGGSLEGKVHLINWQVVCSPKEEGGLGIRKIDLLNKTLLGKWVWRYAYEKDNLWKKAIG 1621

Query: 23   DEYGDGG 3
             +YG  G
Sbjct: 1622 VKYGQEG 1628


>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
          Length = 1552

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 WRGG-LHL*IHFPNWD*VCLPKEEGGMSGKRVL*MNINLLGKWLG*YEEEEDHFWKKVAV 24
           W GG L    H  NW  VC PKEEGG+  +++  +N  LLGKW+  Y  E+D+ WKK   
Sbjct: 373 WGGGSLEGKGHLINWQVVCSPKEEGGLGIRKIDLLNKTLLGKWVWRYAYEKDNLWKKAIG 432

Query: 23  DEYGDGG 3
            +YG  G
Sbjct: 433 VKYGQEG 439


>emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]
          Length = 1215

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200  WRGG-LHL*IHFPNWD*VCLPKEEGGMSGKRVL*MNINLLGKWLG*YEEEEDHFWKKVAV 24
            W GG +   IH  NW+ VC  KE GG+  +++  +N  LLGKW+  +  EED FW+KV  
Sbjct: 899  WGGGSMERKIHLINWEVVCTQKESGGLGIRKIDLLNKALLGKWIWRFAFEEDFFWRKVVG 958

Query: 23   DEYGDGG 3
             +YG  G
Sbjct: 959  VKYGQLG 965


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