BLASTX nr result

ID: Coptis25_contig00041515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041515
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272921.1| PREDICTED: uncharacterized protein LOC100245...    89   4e-16
ref|XP_002453415.1| hypothetical protein SORBIDRAFT_04g005660 [S...    78   7e-13
ref|XP_002870044.1| hypothetical protein ARALYDRAFT_493014 [Arab...    78   9e-13
gb|ABF18894.1| SNI1 [Solanum tuberosum]                                76   3e-12
gb|ABF00136.1| SNI1 [Solanum tuberosum]                                76   3e-12

>ref|XP_002272921.1| PREDICTED: uncharacterized protein LOC100245146 [Vitis vinifera]
           gi|297740458|emb|CBI30640.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = +2

Query: 50  MEVKRNTTSRNNGIEENTMAILDSSGIKDSKDLLDDRLAFLEAVRASSLVSESGSAPSSK 229
           ME    + S    IEENTMAI+D++G KD++D  DDR+AFLEAVRASS+V E+G+AP++K
Sbjct: 1   MESSSRSRSHAGSIEENTMAIIDAAGAKDTQDTNDDRMAFLEAVRASSIVPETGTAPTNK 60

Query: 230 MFEAIFHILK 259
           MFEAIF ILK
Sbjct: 61  MFEAIFQILK 70


>ref|XP_002453415.1| hypothetical protein SORBIDRAFT_04g005660 [Sorghum bicolor]
           gi|241933246|gb|EES06391.1| hypothetical protein
           SORBIDRAFT_04g005660 [Sorghum bicolor]
          Length = 473

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/61 (60%), Positives = 50/61 (81%)
 Frame = +2

Query: 80  NNGIEENTMAILDSSGIKDSKDLLDDRLAFLEAVRASSLVSESGSAPSSKMFEAIFHILK 259
           + GIEEN MAILDSSGIKDS+DL DDR AFLEAVR++ L +++ SAPS +M++ +F I +
Sbjct: 16  DGGIEENAMAILDSSGIKDSRDLHDDRAAFLEAVRSACLAADNPSAPSWRMYDGVFQIFR 75

Query: 260 D 262
           +
Sbjct: 76  N 76


>ref|XP_002870044.1| hypothetical protein ARALYDRAFT_493014 [Arabidopsis lyrata subsp.
           lyrata] gi|297315880|gb|EFH46303.1| hypothetical protein
           ARALYDRAFT_493014 [Arabidopsis lyrata subsp. lyrata]
          Length = 431

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/74 (52%), Positives = 55/74 (74%), Gaps = 5/74 (6%)
 Frame = +2

Query: 53  EVKRNTTSR-----NNGIEENTMAILDSSGIKDSKDLLDDRLAFLEAVRASSLVSESGSA 217
           E K N TSR       G+E NT+A+LDS+G KD++D  +DRL +LEAVR++SLV E+G  
Sbjct: 4   ETKANNTSRVMSSYGGGLEANTLAMLDSTGAKDNRDANEDRLQYLEAVRSASLVPENGVP 63

Query: 218 PSSKMFEAIFHILK 259
           P++KM++AIF IL+
Sbjct: 64  PTNKMYQAIFRILR 77


>gb|ABF18894.1| SNI1 [Solanum tuberosum]
          Length = 475

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +2

Query: 50  MEVKRNTTSRNNGIEENTMAILDSSGI-KDSKDLLDDRLAFLEAVRASSLVSESGSAPSS 226
           M  ++   S N GIEENTMAILD+SG  +DS    DD LAFLEAVR++SL+ E+G+ P+S
Sbjct: 1   MAKRKRGGSNNGGIEENTMAILDTSGFNRDSHHRHDDSLAFLEAVRSASLLPENGTPPTS 60

Query: 227 KMFEAIFHILKD 262
            M EAIF ILK+
Sbjct: 61  TMREAIFQILKE 72


>gb|ABF00136.1| SNI1 [Solanum tuberosum]
          Length = 475

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +2

Query: 50  MEVKRNTTSRNNGIEENTMAILDSSGI-KDSKDLLDDRLAFLEAVRASSLVSESGSAPSS 226
           M  ++   S N GIEENTMAILD+SG  +DS    DD LAFLEAVR++SL+ E+G+ P+S
Sbjct: 1   MAKRKRGGSNNGGIEENTMAILDTSGFNRDSHHRHDDSLAFLEAVRSASLLPENGTPPTS 60

Query: 227 KMFEAIFHILKD 262
            M EAIF ILK+
Sbjct: 61  TMREAIFQILKE 72


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