BLASTX nr result

ID: Coptis25_contig00041507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041507
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica...   192   2e-47
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   185   4e-45
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   183   1e-44
emb|CBI34887.3| unnamed protein product [Vitis vinifera]              183   1e-44
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]   182   2e-44

>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
           probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus]
          Length = 1189

 Score =  192 bits (489), Expect = 2e-47
 Identities = 87/110 (79%), Positives = 101/110 (91%)
 Frame = +1

Query: 1   PGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGKLMTKYYLKFDTMKHIMET 180
           P  ++EKHM++IC++KVNELSRH MIWMDE GFLLKPL+PG+LMTKYYLKFDTMKHIM  
Sbjct: 573 PNHNMEKHMEDICIEKVNELSRHQMIWMDEDGFLLKPLDPGRLMTKYYLKFDTMKHIMHA 632

Query: 181 PESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRLRFHILTE 330
           PE+CSLE+AL IIC +EEI+WIQLRRNEKKLLND+NNDK+GRLRFHIL E
Sbjct: 633 PENCSLEEALRIICHAEEISWIQLRRNEKKLLNDVNNDKDGRLRFHILGE 682


>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
           max]
          Length = 1195

 Score =  185 bits (469), Expect = 4e-45
 Identities = 82/107 (76%), Positives = 101/107 (94%)
 Frame = +1

Query: 4   GESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGKLMTKYYLKFDTMKHIMETP 183
           G+ LEKH+Q+ICV+KVNELS++ M+W+DE GFLL+PL+PG+LMTKYYL+FDTMK IM TP
Sbjct: 499 GDRLEKHVQDICVRKVNELSQNDMVWVDEDGFLLRPLDPGRLMTKYYLRFDTMKQIMRTP 558

Query: 184 ESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRLRFHIL 324
           E+CSLEDAL+++CC+EEIAWIQLRRNEKKLLN+IN DK+GRLRFHIL
Sbjct: 559 ENCSLEDALHVVCCAEEIAWIQLRRNEKKLLNEINADKDGRLRFHIL 605


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/108 (80%), Positives = 97/108 (89%)
 Frame = +1

Query: 1    PGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGKLMTKYYLKFDTMKHIMET 180
            PG  +EK+ Q+ICVQKVNELS+H MIW DE GFLLKPLEPG+LMTKYYLKF TMKHIM+T
Sbjct: 1249 PGNLIEKYTQDICVQKVNELSQHQMIWTDEDGFLLKPLEPGRLMTKYYLKFGTMKHIMQT 1308

Query: 181  PESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRLRFHIL 324
            P +CSLEDAL+IIC SEEIAWIQLRRNEKK LNDIN DK+G+LRFHIL
Sbjct: 1309 PLNCSLEDALHIICRSEEIAWIQLRRNEKKFLNDINMDKDGQLRFHIL 1356


>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
          Length = 1270

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/108 (80%), Positives = 97/108 (89%)
 Frame = +1

Query: 1   PGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGKLMTKYYLKFDTMKHIMET 180
           PG  +EK+ Q+ICVQKVNELS+H MIW DE GFLLKPLEPG+LMTKYYLKF TMKHIM+T
Sbjct: 496 PGNLIEKYTQDICVQKVNELSQHQMIWTDEDGFLLKPLEPGRLMTKYYLKFGTMKHIMQT 555

Query: 181 PESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRLRFHIL 324
           P +CSLEDAL+IIC SEEIAWIQLRRNEKK LNDIN DK+G+LRFHIL
Sbjct: 556 PLNCSLEDALHIICRSEEIAWIQLRRNEKKFLNDINMDKDGQLRFHIL 603


>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
          Length = 1131

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/108 (80%), Positives = 96/108 (88%)
 Frame = +1

Query: 1   PGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGKLMTKYYLKFDTMKHIMET 180
           PG  +EK+ Q+ICVQKVNELS+H MIW DE GFLLKPLEPG+LMTKYYLKF TMKHIM+T
Sbjct: 391 PGNLIEKYTQDICVQKVNELSQHQMIWTDEDGFLLKPLEPGRLMTKYYLKFGTMKHIMQT 450

Query: 181 PESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRLRFHIL 324
           P +CSLEDAL+IIC SEEIAWIQLRRNEKK LNDIN DK+G LRFHIL
Sbjct: 451 PLNCSLEDALHIICRSEEIAWIQLRRNEKKFLNDINMDKDGXLRFHIL 498


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