BLASTX nr result

ID: Coptis25_contig00040185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040185
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35378.3| unnamed protein product [Vitis vinifera]               59   9e-07

>emb|CBI35378.3| unnamed protein product [Vitis vinifera]
          Length = 1633

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
 Frame = -2

Query: 600 EGEIIFRRWNPEVGSVNENRLKLTEVWLSFSGVPIHLKTREIAKALTKACGSSMDLDEN- 424
           + E+I  +W+PEVG +  N++ + E W+   G+P+HL +RE+ K +   CG  +++DE  
Sbjct: 52  DNELILEKWHPEVGCLG-NKVMVKEAWVRVVGLPLHLWSREVFKLIGDGCGGLINVDEET 110

Query: 423 ----SLDVCRKKIRVKSKVGDVGLVPRIIRLEERG--YMFPIWVEVELDGEKEVDIPSWP 262
               +L   R  +RVK +       P  ++L E    Y   +W EV+         P + 
Sbjct: 111 FSMANLQWARLLVRVKGRD-----FPSSVQLVEGSGCYSIQLWWEVQ---------PWYS 156

Query: 261 EMANIGSVVAENDT------GEGVAD 202
           ++   GS   + DT      G G+ D
Sbjct: 157 QVMPAGSGCRKGDTETEDEEGSGLGD 182


Top