BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039296
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471...    85   3e-14
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    81   5e-13
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               79   3e-12
ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...    74   8e-11

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  100 bits (250), Expect = 5e-19
 Identities = 92/274 (33%), Positives = 126/274 (45%), Gaps = 21/274 (7%)
 Frame = +2

Query: 50  FSFPVLEEFRTHELGWKTFNTVNISAPSLKRLIIHDDV----ARIKDCEINIFAESLIFF 217
           FS P L E   HE  W     V+ISAP L+ L IH+      A +  C + IF   L  F
Sbjct: 193 FSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADF 252

Query: 218 ELTSQLECEYNLHNLSSEVGAVIDAGWSDDN----GHRVIKLLRGICNVKDLQLCRRATH 385
            +   L  +Y L+  SS V   I    + D      +R  KLL GI + + L L      
Sbjct: 253 TIIGTLSNDYCLYE-SSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCL------ 305

Query: 386 TLSAVDSSGDMPT-------FSNLINLRV-SADLCVNDRDLVNILHKMLSIESLYLEG-S 538
           T + VD   D P        F NL +L   S +  ++     +I++    + +L   G S
Sbjct: 306 TTNVVDVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVS 365

Query: 539 TPKSLGQGLP--TLEIAPPCVLSRLKLVTLGYYKASESDLCLVKFLLRNAMILEKMTIIF 712
            PK         TL+ +PPC LS LK + +G +   E +L  V FLL+NA  LE M II+
Sbjct: 366 MPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIY 425

Query: 713 CYKLRRDP--EKKVEVSRQLLTLPRGSAHSVIDF 808
               RRD   +K  E+ +QLL LPR S    I+F
Sbjct: 426 SGSARRDQGVDKTNEIHQQLLALPRWSEIGNINF 459


>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
          Length = 453

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 80/262 (30%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
 Frame = +2

Query: 53  SFPVLEEFRTHELGWKTFNTVNISAPSLKRLII---HDDVARIKDCEINIFAESLIFFEL 223
           +FPVL+        W T   + I AP L+R  I   +    +     I IFA +L  F  
Sbjct: 196 NFPVLKVLEARGCEWLTKQNIGIKAPLLERFSIAIWNSLSNKSHKSAIKIFAPNLADFSY 255

Query: 224 TSQLECEYNLHNLSSEVGAVIDAGWSDDN-------GHRVIKLLRGICNVKDLQLCRRAT 382
              LE E  L N +S   A +     +D        G +V KLL  I  VK L+L     
Sbjct: 256 GGDLEQEIILLNSASIHSASVVIVADEDKMTNVGKLGFQVHKLLAQIREVKQLKLLFYKV 315

Query: 383 HTLSAVDSSGDMPTFSNLINLRVSADLCVNDRDLVNILHKMLSIESLYLEGSTPKSLGQG 562
             + A D    +P FS L  L+++    V    L+NIL+    + SL L+    +S    
Sbjct: 316 -LMHARDIFTHLPAFSRLSYLQLNE---VTGEALLNILNNCPILSSLVLQNGVSESNKDH 371

Query: 563 LPTLEIAPPCVLSRLKLVTLGYYKASESDLCLVKFLLRNAMILEKMTIIFCYKLRRDPEK 742
           + T    P C LS LK+     +   E +L L KF+L NA +LE+M I   + LR     
Sbjct: 372 VLTSASVPQCFLSSLKVFQFKEFNVREHELLLAKFVLANAAVLEQMIICTAFWLRYSEID 431

Query: 743 KVEVSRQLLTLPRGSAHSVIDF 808
             +V  Q+L+ P+ S   +I F
Sbjct: 432 VEKVKDQILSFPKCSNLVMIQF 453


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 92/318 (28%), Positives = 144/318 (45%), Gaps = 25/318 (7%)
 Frame = +2

Query: 59   PVLEEFRTHELGWKTFNTVNISAPSLKRLII--------HDDVARIKDCEINIFAESLIF 214
            PVLEE             VN+S PSLK L I        H      +D ++ + A +L +
Sbjct: 189  PVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEY 248

Query: 215  FELTSQLECEYNLHNLSSEVGAVIDAGWS----DDNGHR--------VIKLLRGICNVKD 358
              +T  L  +Y + +L S V A ID        +++ H         + +LL  I NVK 
Sbjct: 249  LSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKC 308

Query: 359  LQLCRRATHTLSAVDSSGDMPTFSNLINLRVSADLCVNDRDLVNILHKMLSIESLYLE-G 535
            L L      +LS       +PTF N+  L        N   L N LH   ++E+L +E G
Sbjct: 309  LSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETG 368

Query: 536  STPKSLGQG-LPTLEIAPPCVLSRLKLVTLGYYKASESDLCLVKFLLRNAMILEKMTIIF 712
             T + + +G L  L++ P C++  LK + +      + +L  V++LL+NA +L++MT I 
Sbjct: 369  YTNELIPEGWLMPLQV-PACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMT-ID 426

Query: 713  CYKLRRDPEKKVEVSRQLLTLPRGSAHSVIDFS*VFAV*SYLGVVTG*DRTKYLFPF--- 883
            C++   D E    V ++LL LPRGS            V S  G+ T  +  K +F +   
Sbjct: 427  CHESYMDQE--FCVCKKLLGLPRGSRSCF--------VVSSKGIETDPENIKAIFDWIVP 476

Query: 884  TNLHSSISCVFRQFFCKI 937
            TN+H   +  F +   K+
Sbjct: 477  TNIHEVANKAFEEIKSKM 494


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
 Frame = +2

Query: 59  PVLEEFRTHELGWKTFNTVNISAPSLKRLIIHDDVARIKDCEINIFAESLIFFELTSQLE 238
           PVLEE              N+SAP+LK L I+         ++ + A +L +  +T  + 
Sbjct: 151 PVLEELVIERWRLDEQWVFNVSAPTLKSLAIY-----FSKYKLVVDAPNLEYLSITDFVS 205

Query: 239 CEYNLHNLSSEVGAVIDAGWS----DDN---GHRVIKLLRGICNVKDLQLCRRATHTLSA 397
            +Y + NLSS V A ++ G +    DD      R+ +LLRGI NVK L L     H+LS 
Sbjct: 206 EDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSG 265

Query: 398 VDSSGDMPTFSNLINLRVSADLCVNDRDLVNILHKMLSIESLYLEGSTPKSLGQGLPTLE 577
           +    ++P F ++  L +  D       L   L    ++E L LE            TL 
Sbjct: 266 MFCGYELPAFHSVTRLELEVDYGYGLEFLKEFLDTSPNLEILILENVNKDECEIEEWTLP 325

Query: 578 I-APPCVLSRLKLVTLGYYKASESDLCLVKFLLRNAMILEKMTI 706
           +  P CV   L  V +  +   + +L  ++FLL+NA +L+KM+I
Sbjct: 326 LQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369


>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 58/188 (30%), Positives = 90/188 (47%)
 Frame = +2

Query: 311 GHRVIKLLRGICNVKDLQLCRRATHTLSAVDSSGDMPTFSNLINLRVSADLCVNDRDLVN 490
           G +V KLL  IC V+ L+L       + A D    +P F  L  L ++    V    L+N
Sbjct: 5   GFQVHKLLTQICEVEQLKLLLYKV-LVHAADIFTHLPVFGKLTYLLLNE---VTGEALLN 60

Query: 491 ILHKMLSIESLYLEGSTPKSLGQGLPTLEIAPPCVLSRLKLVTLGYYKASESDLCLVKFL 670
           +LH    + +L L+      L + + T    P C LS LK+     +   E +L L KF+
Sbjct: 61  LLHNSPMLNTLILQNGV-FDLNEDMLTSASVPQCFLSSLKVFQFKGFNVHEHELLLAKFV 119

Query: 671 LRNAMILEKMTIIFCYKLRRDPEKKVEVSRQLLTLPRGSAHSVIDFS*VFAV*SYLGVVT 850
           + NA +LE+MT+   + L+       +V  Q+L+ P+ S+  +I+FS V  +   L   T
Sbjct: 120 MANATVLERMTLSTAFWLQYSDIDMEKVKEQILSFPKRSSFVMIEFSHVNVI--DLNAPT 177

Query: 851 G*DRTKYL 874
             D TK L
Sbjct: 178 SDDVTKQL 185