BLASTX nr result

ID: Coptis25_contig00037154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037154
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328116.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002523817.1| expressed protein, putative [Ricinus communi...    70   1e-10
ref|XP_002313596.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_004167882.1| PREDICTED: protein transport protein Sec24-l...    69   4e-10
ref|XP_004139490.1| PREDICTED: protein transport protein SEC24-1...    69   4e-10

>ref|XP_002328116.1| predicted protein [Populus trichocarpa] gi|222837631|gb|EEE75996.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/53 (66%), Positives = 38/53 (71%)
 Frame = -3

Query: 259 PTTSWERTTASGQGFVGVLPDERGFGLVME*LIKCLGSEYGNAFALGMVLPII 101
           PTTSWERTT +GQG  GVL   RGFG+ ME L+K LGSEYGN FAL  V   I
Sbjct: 224 PTTSWERTTGAGQGLDGVLMGGRGFGVAMEALLKYLGSEYGNTFALARVFAFI 276


>ref|XP_002523817.1| expressed protein, putative [Ricinus communis]
           gi|223536905|gb|EEF38543.1| expressed protein, putative
           [Ricinus communis]
          Length = 740

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/53 (66%), Positives = 37/53 (69%)
 Frame = -3

Query: 259 PTTSWERTTASGQGFVGVLPDERGFGLVME*LIKCLGSEYGNAFALGMVLPII 101
           PTTSWERTT +GQG  GVL   RGFG+ ME L K LGSEYGN FAL  V   I
Sbjct: 220 PTTSWERTTGAGQGLDGVLMGGRGFGVAMEALFKYLGSEYGNTFALARVFAFI 272


>ref|XP_002313596.1| predicted protein [Populus trichocarpa] gi|222850004|gb|EEE87551.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 37/49 (75%)
 Frame = -3

Query: 259 PTTSWERTTASGQGFVGVLPDERGFGLVME*LIKCLGSEYGNAFALGMV 113
           PTTSWERTT +GQG  GVL   RGFG+ ME L+K +GSEYGN FAL  V
Sbjct: 224 PTTSWERTTGAGQGLEGVLMGGRGFGVAMEALVKYIGSEYGNTFALARV 272


>ref|XP_004167882.1| PREDICTED: protein transport protein Sec24-like At3g07100-like,
           partial [Cucumis sativus]
          Length = 559

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -3

Query: 259 PTTSWERTTASGQGFVGVLPDERGFGLVME*LIKCLGSEYGNAFALGMVLPII 101
           PTTSWERTTA+GQG  G+L   RGFG+ ME L+  LGSEYGN FAL  +   +
Sbjct: 224 PTTSWERTTAAGQGIDGILMGGRGFGVAMEALLNYLGSEYGNIFALARIFAFL 276


>ref|XP_004139490.1| PREDICTED: protein transport protein SEC24-1-like [Cucumis sativus]
          Length = 742

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -3

Query: 259 PTTSWERTTASGQGFVGVLPDERGFGLVME*LIKCLGSEYGNAFALGMVLPII 101
           PTTSWERTTA+GQG  G+L   RGFG+ ME L+  LGSEYGN FAL  +   +
Sbjct: 224 PTTSWERTTAAGQGIDGILMGGRGFGVAMEALLNYLGSEYGNIFALARIFAFL 276


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