BLASTX nr result
ID: Coptis25_contig00036766
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00036766 (235 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera] 46 7e-09 emb|CAN76606.1| hypothetical protein VITISV_012935 [Vitis vinifera] 47 1e-08 emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 53 4e-08 emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera] 53 4e-08 emb|CAN81382.1| hypothetical protein VITISV_018448 [Vitis vinifera] 51 4e-08 >emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera] Length = 1210 Score = 46.2 bits (108), Expect(2) = 7e-09 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 9/58 (15%) Frame = -1 Query: 235 MTGMSSAFSNY---------KIISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89 MT FS Y KI GT S ++GKG +H S S+TL+ VLHVP + NL+ Sbjct: 374 MTDAHHLFSTYSPCAGNLKVKIAYGTLSPVAGKGSIHISESITLNXVLHVPNLSCNLL 431 Score = 38.5 bits (88), Expect(2) = 7e-09 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = -2 Query: 75 TKSFNCSVTFSPSYCVFQDLETRQT 1 TK NCS F PS+CVFQDL +R+T Sbjct: 437 TKQSNCSXKFLPSHCVFQDLSSRKT 461 >emb|CAN76606.1| hypothetical protein VITISV_012935 [Vitis vinifera] Length = 1131 Score = 47.4 bits (111), Expect(2) = 1e-08 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 9/58 (15%) Frame = -1 Query: 235 MTGMSSAFSNY---------KIISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89 MT FS Y KI +GT S ++GKG +H S S+TL+ VLHVP + NL+ Sbjct: 325 MTDAHHLFSTYSPYAGNLKVKIANGTLSPVAGKGSIHISESITLNPVLHVPNLSCNLL 382 Score = 36.6 bits (83), Expect(2) = 1e-08 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -2 Query: 75 TKSFNCSVTFSPSYCVFQDLETRQT 1 TK NCS F PS+CVFQDL + +T Sbjct: 388 TKRSNCSAKFLPSHCVFQDLSSEKT 412 >emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] Length = 1505 Score = 52.8 bits (125), Expect(2) = 4e-08 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 9/58 (15%) Frame = -1 Query: 235 MTGMSSAFSNYK---------IISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89 MTG S FS+YK I G+ S+I+GKG V SPSLTL +VLHVP + NL+ Sbjct: 368 MTGSSQIFSSYKPCAGNKKIKIXDGSLSAIAGKGSVFISPSLTLHNVLHVPNLSCNLL 425 Score = 29.3 bits (64), Expect(2) = 4e-08 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 75 TKSFNCSVTFSPSYCVFQDLETRQT 1 T+ C F PSYC FQ+L + +T Sbjct: 431 TQDHQCQANFYPSYCEFQELTSGRT 455 >emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera] Length = 1246 Score = 52.8 bits (125), Expect(2) = 4e-08 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 9/58 (15%) Frame = -1 Query: 235 MTGMSSAFSNYK---------IISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89 MTG S FS+YK I G+ S+I+GKG V SPSLTL +VLHVP + NL+ Sbjct: 255 MTGSSQIFSSYKPCAGNKKIKIADGSLSAIAGKGSVFISPSLTLHNVLHVPNLSCNLL 312 Score = 29.3 bits (64), Expect(2) = 4e-08 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 75 TKSFNCSVTFSPSYCVFQDLETRQT 1 T+ C F PSYC FQ+L + +T Sbjct: 318 TQDHQCQANFYPSYCEFQELTSGRT 342 >emb|CAN81382.1| hypothetical protein VITISV_018448 [Vitis vinifera] Length = 495 Score = 50.8 bits (120), Expect(2) = 4e-08 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 9/58 (15%) Frame = -1 Query: 235 MTGMSSAFSNYK---------IISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89 MT S F+NY ++G+ ++I+G DVH SP+LTL +VLH+PK +TNLV Sbjct: 175 MTHSSHQFNNYNPCPSSRKKATVNGSLTTIAGVRDVHISPTLTLRNVLHIPKLSTNLV 232 Score = 31.2 bits (69), Expect(2) = 4e-08 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 75 TKSFNCSVTFSPSYCVFQD 19 T+ C+VTF P++CVFQD Sbjct: 238 TQDLGCNVTFYPTHCVFQD 256