BLASTX nr result

ID: Coptis25_contig00036766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036766
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]    46   7e-09
emb|CAN76606.1| hypothetical protein VITISV_012935 [Vitis vinifera]    47   1e-08
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    53   4e-08
emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]    53   4e-08
emb|CAN81382.1| hypothetical protein VITISV_018448 [Vitis vinifera]    51   4e-08

>emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]
          Length = 1210

 Score = 46.2 bits (108), Expect(2) = 7e-09
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
 Frame = -1

Query: 235 MTGMSSAFSNY---------KIISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89
           MT     FS Y         KI  GT S ++GKG +H S S+TL+ VLHVP  + NL+
Sbjct: 374 MTDAHHLFSTYSPCAGNLKVKIAYGTLSPVAGKGSIHISESITLNXVLHVPNLSCNLL 431



 Score = 38.5 bits (88), Expect(2) = 7e-09
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -2

Query: 75  TKSFNCSVTFSPSYCVFQDLETRQT 1
           TK  NCS  F PS+CVFQDL +R+T
Sbjct: 437 TKQSNCSXKFLPSHCVFQDLSSRKT 461


>emb|CAN76606.1| hypothetical protein VITISV_012935 [Vitis vinifera]
          Length = 1131

 Score = 47.4 bits (111), Expect(2) = 1e-08
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
 Frame = -1

Query: 235 MTGMSSAFSNY---------KIISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89
           MT     FS Y         KI +GT S ++GKG +H S S+TL+ VLHVP  + NL+
Sbjct: 325 MTDAHHLFSTYSPYAGNLKVKIANGTLSPVAGKGSIHISESITLNPVLHVPNLSCNLL 382



 Score = 36.6 bits (83), Expect(2) = 1e-08
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 75  TKSFNCSVTFSPSYCVFQDLETRQT 1
           TK  NCS  F PS+CVFQDL + +T
Sbjct: 388 TKRSNCSAKFLPSHCVFQDLSSEKT 412


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 52.8 bits (125), Expect(2) = 4e-08
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
 Frame = -1

Query: 235 MTGMSSAFSNYK---------IISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89
           MTG S  FS+YK         I  G+ S+I+GKG V  SPSLTL +VLHVP  + NL+
Sbjct: 368 MTGSSQIFSSYKPCAGNKKIKIXDGSLSAIAGKGSVFISPSLTLHNVLHVPNLSCNLL 425



 Score = 29.3 bits (64), Expect(2) = 4e-08
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 75  TKSFNCSVTFSPSYCVFQDLETRQT 1
           T+   C   F PSYC FQ+L + +T
Sbjct: 431 TQDHQCQANFYPSYCEFQELTSGRT 455


>emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]
          Length = 1246

 Score = 52.8 bits (125), Expect(2) = 4e-08
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
 Frame = -1

Query: 235 MTGMSSAFSNYK---------IISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89
           MTG S  FS+YK         I  G+ S+I+GKG V  SPSLTL +VLHVP  + NL+
Sbjct: 255 MTGSSQIFSSYKPCAGNKKIKIADGSLSAIAGKGSVFISPSLTLHNVLHVPNLSCNLL 312



 Score = 29.3 bits (64), Expect(2) = 4e-08
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 75  TKSFNCSVTFSPSYCVFQDLETRQT 1
           T+   C   F PSYC FQ+L + +T
Sbjct: 318 TQDHQCQANFYPSYCEFQELTSGRT 342


>emb|CAN81382.1| hypothetical protein VITISV_018448 [Vitis vinifera]
          Length = 495

 Score = 50.8 bits (120), Expect(2) = 4e-08
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 9/58 (15%)
 Frame = -1

Query: 235 MTGMSSAFSNYK---------IISGTYSSISGKGDVHASPSLTLSSVLHVPKFATNLV 89
           MT  S  F+NY           ++G+ ++I+G  DVH SP+LTL +VLH+PK +TNLV
Sbjct: 175 MTHSSHQFNNYNPCPSSRKKATVNGSLTTIAGVRDVHISPTLTLRNVLHIPKLSTNLV 232



 Score = 31.2 bits (69), Expect(2) = 4e-08
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 75  TKSFNCSVTFSPSYCVFQD 19
           T+   C+VTF P++CVFQD
Sbjct: 238 TQDLGCNVTFYPTHCVFQD 256


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