BLASTX nr result

ID: Coptis25_contig00036608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036608
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142637.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   254   7e-66
gb|AFK38747.1| unknown [Lotus japonicus]                              252   2e-65
emb|CAD70622.1| 1-aminocyclopropane-1-carboxylic acid oxidase [C...   249   2e-64
ref|XP_002307461.1| 1-aminocyclopropane-1-carboxylate [Populus t...   249   2e-64
gb|AAN87846.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Po...   247   8e-64

>ref|XP_004142637.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like
           [Cucumis sativus] gi|449500668|ref|XP_004161163.1|
           PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase
           5-like [Cucumis sativus]
          Length = 309

 Score =  254 bits (648), Expect = 7e-66
 Identities = 121/144 (84%), Positives = 133/144 (92%)
 Frame = +3

Query: 3   EAFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQILKDGEWIDVQPLEN 182
           +AFFGTK+SHYPPCP+PELVNGLRAHTDAGGVILLFQDD+VGGLQILKDG+WIDVQP  N
Sbjct: 154 KAFFGTKISHYPPCPHPELVNGLRAHTDAGGVILLFQDDQVGGLQILKDGQWIDVQPFPN 213

Query: 183 SIVINTGDQIEVLSNGKYKSVWHRVLAGTYGNRRSIASFYNPSLKATIAPAPQLAIDPVT 362
           SIVINTGDQIEVLSNG+YKSVWHRVLA   GNRRSIASFYNPS++ATIAPA QL +D   
Sbjct: 214 SIVINTGDQIEVLSNGRYKSVWHRVLASPNGNRRSIASFYNPSMEATIAPAAQL-VDKAN 272

Query: 363 KEVEQAYPKFVFGDYMSVYSEQKF 434
           +EVE+ YPKFVFGDYMSVY+EQKF
Sbjct: 273 QEVEEGYPKFVFGDYMSVYAEQKF 296


>gb|AFK38747.1| unknown [Lotus japonicus]
          Length = 309

 Score =  252 bits (644), Expect = 2e-65
 Identities = 119/143 (83%), Positives = 129/143 (90%)
 Frame = +3

Query: 6   AFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQILKDGEWIDVQPLENS 185
           AFFGTKVSHYPPCP PELVNGLRAHTDAGGVILLFQDDKVGGLQ+LK GEWIDVQPL N+
Sbjct: 154 AFFGTKVSHYPPCPYPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKGGEWIDVQPLPNA 213

Query: 186 IVINTGDQIEVLSNGKYKSVWHRVLAGTYGNRRSIASFYNPSLKATIAPAPQLAIDPVTK 365
           IVINTGDQIEVLSNG+YKS WHRVL    GNRRS+ASFYNPSLKATI+PAPQL ++   +
Sbjct: 214 IVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEKENQ 273

Query: 366 EVEQAYPKFVFGDYMSVYSEQKF 434
           EVE  YP+FVFGDYMSVY+EQKF
Sbjct: 274 EVEDTYPEFVFGDYMSVYAEQKF 296


>emb|CAD70622.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Cicer arietinum]
          Length = 308

 Score =  249 bits (636), Expect = 2e-64
 Identities = 120/143 (83%), Positives = 130/143 (90%)
 Frame = +3

Query: 6   AFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQILKDGEWIDVQPLENS 185
           AFFGTKVSHYPPCP PELVNGLRAHTDAGGVILLFQDDKVGGLQ+LKDGEWIDVQPL N+
Sbjct: 154 AFFGTKVSHYPPCPYPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWIDVQPLPNA 213

Query: 186 IVINTGDQIEVLSNGKYKSVWHRVLAGTYGNRRSIASFYNPSLKATIAPAPQLAIDPVTK 365
           IVINTGDQIEVL+NG+YKS WHRVL  T GNRRSIASFYNP LKATI+PAPQLA +   +
Sbjct: 214 IVINTGDQIEVLTNGRYKSCWHRVLTSTDGNRRSIASFYNPPLKATISPAPQLA-EKENQ 272

Query: 366 EVEQAYPKFVFGDYMSVYSEQKF 434
           +V+  YPKFVFGDYMSVY+EQKF
Sbjct: 273 QVDDTYPKFVFGDYMSVYAEQKF 295


>ref|XP_002307461.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa]
           gi|222856910|gb|EEE94457.1|
           1-aminocyclopropane-1-carboxylate [Populus trichocarpa]
          Length = 310

 Score =  249 bits (635), Expect = 2e-64
 Identities = 117/143 (81%), Positives = 133/143 (93%)
 Frame = +3

Query: 6   AFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQILKDGEWIDVQPLENS 185
           AFFGTKVSHYPPCP+PELVNGLRAHTDAGGVILLFQDD+VGGLQILKDG+WIDVQP++N+
Sbjct: 156 AFFGTKVSHYPPCPHPELVNGLRAHTDAGGVILLFQDDEVGGLQILKDGQWIDVQPMKNT 215

Query: 186 IVINTGDQIEVLSNGKYKSVWHRVLAGTYGNRRSIASFYNPSLKATIAPAPQLAIDPVTK 365
           IVINTGDQIEVLSNG+YKS WHRVLA   GNRRSIASFYNPSLKAT+APAP L ++  ++
Sbjct: 216 IVINTGDQIEVLSNGRYKSTWHRVLASPDGNRRSIASFYNPSLKATVAPAPAL-VEKDSE 274

Query: 366 EVEQAYPKFVFGDYMSVYSEQKF 434
           ++ Q YPKF+FGDYMSVY+EQKF
Sbjct: 275 KINQTYPKFLFGDYMSVYAEQKF 297


>gb|AAN87846.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Populus tremula x
           Populus tremuloides]
          Length = 310

 Score =  247 bits (630), Expect = 8e-64
 Identities = 117/143 (81%), Positives = 132/143 (92%)
 Frame = +3

Query: 6   AFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQILKDGEWIDVQPLENS 185
           AFFGTKVSHYPPCP+PELVNGLRAHTDAGGVILLFQDD VGGLQILKDG+WIDVQP++N+
Sbjct: 156 AFFGTKVSHYPPCPHPELVNGLRAHTDAGGVILLFQDDVVGGLQILKDGQWIDVQPMKNT 215

Query: 186 IVINTGDQIEVLSNGKYKSVWHRVLAGTYGNRRSIASFYNPSLKATIAPAPQLAIDPVTK 365
           IVINTGDQIEVLSNG+YKS WHRVLA   GNRRSIASFYNPSLKATIAPAP L ++   +
Sbjct: 216 IVINTGDQIEVLSNGRYKSTWHRVLASPDGNRRSIASFYNPSLKATIAPAPGL-VEKDGE 274

Query: 366 EVEQAYPKFVFGDYMSVYSEQKF 434
           E++Q YPKF+FGDYMS+Y++QKF
Sbjct: 275 EIDQTYPKFLFGDYMSIYAKQKF 297


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