BLASTX nr result

ID: Coptis25_contig00036157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036157
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515917.1| conserved hypothetical protein [Ricinus comm...   113   3e-33
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...   116   1e-31
ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like...    98   2e-30
ref|XP_002512643.1| conserved hypothetical protein [Ricinus comm...   107   2e-29
ref|XP_002871553.1| hypothetical protein ARALYDRAFT_488135 [Arab...   109   8e-29

>ref|XP_002515917.1| conserved hypothetical protein [Ricinus communis]
           gi|223544822|gb|EEF46337.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  113 bits (282), Expect(2) = 3e-33
 Identities = 52/74 (70%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +1

Query: 184 CLVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPRESYAEYEGLEEA 360
           CL +D+++  +G    ISLA+KWCPSL+S+FD++TLLCESIAR+VFPRESY EYEG+EEA
Sbjct: 270 CLKADLEHLKAGEMKNISLAAKWCPSLNSSFDRSTLLCESIARKVFPRESYPEYEGVEEA 329

Query: 361 HYAYRVRDHLRKEV 402
           HYAYR+RD LRKEV
Sbjct: 330 HYAYRIRDRLRKEV 343



 Score = 53.5 bits (127), Expect(2) = 3e-33
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +3

Query: 18  VPREKRIALEMKRMQIQEELAREIRKVKGITQARKAVEKYISDAEFRFLHDQISQVF 188
           V RE RIA  +KR  I++E A ++RK K +  A+K  EKY  D +FRFL+++IS  F
Sbjct: 211 VTRELRIANAIKRNAIEKEKASKLRKEKKVAMAKKIYEKYNQDPDFRFLYERISHFF 267


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  116 bits (291), Expect(2) = 1e-31
 Identities = 54/74 (72%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = +1

Query: 184 CLVSDMKNFNSGSGG-ISLASKWCPSLDSTFDKTTLLCESIARRVFPRESYAEYEGLEEA 360
           CL +DM++ NS +   +SLA+KWCPS+DS+FD++TLLCESIAR+VFPRESY EYEG+EEA
Sbjct: 274 CLKTDMQHLNSSNTTKVSLAAKWCPSIDSSFDRSTLLCESIARKVFPRESYPEYEGIEEA 333

Query: 361 HYAYRVRDHLRKEV 402
           HYAYRVRD LRKEV
Sbjct: 334 HYAYRVRDRLRKEV 347



 Score = 44.7 bits (104), Expect(2) = 1e-31
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = +3

Query: 12  PGVPREKRIALEMKRMQIQEELAREIRKVKGITQARKAVEKYISDAEFRFLHDQISQVF 188
           P +P   RI  E +R ++++E A   RK +    A+K +E+Y  D ++RFL++ +S  F
Sbjct: 213 PSIPIHIRIQNEKRRAEMEKENASIARKERRAAMAKKVIERYSHDPDYRFLYEGVSDFF 271


>ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like isoform 1 [Vitis
           vinifera]
          Length = 647

 Score = 97.8 bits (242), Expect(2) = 2e-30
 Identities = 48/73 (65%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
 Frame = +1

Query: 187 LVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPRESYAEYEGLEEAH 363
           L SD++  NSG+   ISLA+KWCPS+DS+FD++TLLC SIAR++FP+ S  EYEG+E+AH
Sbjct: 272 LKSDLQLLNSGNVNKISLAAKWCPSIDSSFDRSTLLCGSIARKIFPK-SDPEYEGVEDAH 330

Query: 364 YAYRVRDHLRKEV 402
           YAYRVRD LRK+V
Sbjct: 331 YAYRVRDRLRKQV 343



 Score = 59.7 bits (143), Expect(2) = 2e-30
 Identities = 27/57 (47%), Positives = 41/57 (71%)
 Frame = +3

Query: 18  VPREKRIALEMKRMQIQEELAREIRKVKGITQARKAVEKYISDAEFRFLHDQISQVF 188
           +PRE R+  EM+R + ++E AR  RK + +  A+KAVE+Y  D ++RFLHD+IS +F
Sbjct: 212 LPREVRVKAEMERAKAEKETARVCRKERRLAMAKKAVERYGRDPDYRFLHDRISDLF 268


>ref|XP_002512643.1| conserved hypothetical protein [Ricinus communis]
           gi|223548604|gb|EEF50095.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 657

 Score =  107 bits (267), Expect(2) = 2e-29
 Identities = 49/74 (66%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +1

Query: 184 CLVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPRESYAEYEGLEEA 360
           CL SD++   SG    +SLA+KWCPS+DS+FDK+TLLCES+AR++F RE Y EYEG+EE 
Sbjct: 280 CLKSDIEYLKSGQIRKVSLAAKWCPSIDSSFDKSTLLCESVARKIFTRELYPEYEGVEEV 339

Query: 361 HYAYRVRDHLRKEV 402
           HYAYR+RD LRKEV
Sbjct: 340 HYAYRIRDRLRKEV 353



 Score = 46.6 bits (109), Expect(2) = 2e-29
 Identities = 20/60 (33%), Positives = 38/60 (63%)
 Frame = +3

Query: 9   EPGVPREKRIALEMKRMQIQEELAREIRKVKGITQARKAVEKYISDAEFRFLHDQISQVF 188
           +P   +E+R+   +++ +I++E A   RK K +  A+K  ++Y  D +FRFL+D++S  F
Sbjct: 218 KPHASKERRVKNSLQKDKIEKEKASLSRKWKKVAMAKKVFDRYSRDPDFRFLYDRVSDFF 277


>ref|XP_002871553.1| hypothetical protein ARALYDRAFT_488135 [Arabidopsis lyrata subsp.
           lyrata] gi|297317390|gb|EFH47812.1| hypothetical protein
           ARALYDRAFT_488135 [Arabidopsis lyrata subsp. lyrata]
          Length = 668

 Score =  109 bits (273), Expect(2) = 8e-29
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = +1

Query: 172 RSLKCLVSDMKNFNSGSGGISLASKWCPSLDSTFDKTTLLCESIARRVFPRESYAEYEGL 351
           R L+ L SD  N       ISLA+KWCPSLDS+FDK TLLCESIAR++FPRES+ EYEG+
Sbjct: 284 RDLEFLKSDQTN------QISLAAKWCPSLDSSFDKATLLCESIARKIFPRESFPEYEGV 337

Query: 352 EEAHYAYRVRDHLRKEV 402
           +EAHYAYRVRD LRKEV
Sbjct: 338 DEAHYAYRVRDRLRKEV 354



 Score = 42.4 bits (98), Expect(2) = 8e-29
 Identities = 19/62 (30%), Positives = 37/62 (59%)
 Frame = +3

Query: 3   QREPGVPREKRIALEMKRMQIQEELAREIRKVKGITQARKAVEKYISDAEFRFLHDQISQ 182
           +R+P   RE R+A   ++ Q ++  A   RK K ++  + A  +Y  D ++R+LH+++S 
Sbjct: 217 KRKPVATRELRVANAERKNQAEKARASLDRKKKKVSMGKDAFTRYSHDPDYRYLHERVSD 276

Query: 183 VF 188
           +F
Sbjct: 277 LF 278


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