BLASTX nr result

ID: Coptis25_contig00033980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033980
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352...   137   5e-52
ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-l...   129   3e-50
ref|XP_004138564.1| PREDICTED: putative ABC1 protein At2g40090-l...   129   3e-50
ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-50
ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...   133   7e-50

>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
           ATATH9, putative [Ricinus communis]
          Length = 549

 Score =  137 bits (345), Expect(2) = 5e-52
 Identities = 63/74 (85%), Positives = 68/74 (91%)
 Frame = +2

Query: 221 VTKAFAEMTFKHGFVHCDPHAANMLVRPLPDGKRSIIGKRKPQLILLDHGLYKELDFPTR 400
           V++ FAEM FKHGFVHCDPHAAN+LVRPLP  +RSI+GKRKPQLILLDHGLYKELDF TR
Sbjct: 316 VSQTFAEMMFKHGFVHCDPHAANLLVRPLPSDRRSILGKRKPQLILLDHGLYKELDFTTR 375

Query: 401 INYAALWKALVFAD 442
            NYAALWKALVFAD
Sbjct: 376 FNYAALWKALVFAD 389



 Score = 92.4 bits (228), Expect(2) = 5e-52
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   RLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 162
           +LSPH++DYVYAP+V+WNLSTSKLLTMEFIDAA++ DVK IQ LGIQP EVAKL
Sbjct: 262 KLSPHIADYVYAPKVHWNLSTSKLLTMEFIDAAQVNDVKAIQGLGIQPCEVAKL 315


>ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-like [Cucumis sativus]
          Length = 538

 Score =  129 bits (325), Expect(2) = 3e-50
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = +2

Query: 221 VTKAFAEMTFKHGFVHCDPHAANMLVRPLPDGKRSIIGKRKPQLILLDHGLYKELDFPTR 400
           V+ AFAEM +KHGFVHCDPHAAN+LVRPLP  KR+I GKRKPQL+LLDHGLYK+LDF  R
Sbjct: 307 VSHAFAEMIYKHGFVHCDPHAANLLVRPLPSNKRNIFGKRKPQLVLLDHGLYKDLDFNIR 366

Query: 401 INYAALWKALVFAD 442
            NYA+LWKAL+F+D
Sbjct: 367 FNYASLWKALIFSD 380



 Score = 94.0 bits (232), Expect(2) = 3e-50
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   RLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 162
           +LSPH++DYVYAP+VYWNLSTSKLLTMEF+D A+I DVK IQ+LG+QP EVAKL
Sbjct: 253 KLSPHIADYVYAPKVYWNLSTSKLLTMEFMDGAQINDVKAIQKLGVQPSEVAKL 306


>ref|XP_004138564.1| PREDICTED: putative ABC1 protein At2g40090-like [Cucumis sativus]
          Length = 502

 Score =  129 bits (325), Expect(2) = 3e-50
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = +2

Query: 221 VTKAFAEMTFKHGFVHCDPHAANMLVRPLPDGKRSIIGKRKPQLILLDHGLYKELDFPTR 400
           V+ AFAEM +KHGFVHCDPHAAN+LVRPLP  KR+I GKRKPQL+LLDHGLYK+LDF  R
Sbjct: 307 VSHAFAEMIYKHGFVHCDPHAANLLVRPLPSNKRNIFGKRKPQLVLLDHGLYKDLDFNIR 366

Query: 401 INYAALWKALVFAD 442
            NYA+LWKAL+F+D
Sbjct: 367 FNYASLWKALIFSD 380



 Score = 94.0 bits (232), Expect(2) = 3e-50
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   RLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 162
           +LSPH++DYVYAP+VYWNLSTSKLLTMEF+D A+I DVK IQ+LG+QP EVAKL
Sbjct: 253 KLSPHIADYVYAPKVYWNLSTSKLLTMEFMDGAQINDVKAIQKLGVQPSEVAKL 306


>ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  135 bits (340), Expect(2) = 4e-50
 Identities = 58/74 (78%), Positives = 69/74 (93%)
 Frame = +2

Query: 221 VTKAFAEMTFKHGFVHCDPHAANMLVRPLPDGKRSIIGKRKPQLILLDHGLYKELDFPTR 400
           V++ FAEM F+HGFVHCDPHAAN++VRPLP GKR+I+GKRKPQL+LLDHGLYKELDF TR
Sbjct: 281 VSRVFAEMMFRHGFVHCDPHAANLIVRPLPSGKRTILGKRKPQLVLLDHGLYKELDFTTR 340

Query: 401 INYAALWKALVFAD 442
            NYA+LWKAL+F+D
Sbjct: 341 FNYASLWKALIFSD 354



 Score = 87.8 bits (216), Expect(2) = 4e-50
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = +1

Query: 1   RLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 162
           +LSPH+++YVYAP+V+WNLSTSKLLTMEF+D A + DVK IQ+LGIQP EVA L
Sbjct: 227 KLSPHIAEYVYAPKVHWNLSTSKLLTMEFMDGAHVNDVKTIQKLGIQPNEVATL 280


>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
           vinifera]
          Length = 549

 Score =  133 bits (335), Expect(2) = 7e-50
 Identities = 58/74 (78%), Positives = 68/74 (91%)
 Frame = +2

Query: 221 VTKAFAEMTFKHGFVHCDPHAANMLVRPLPDGKRSIIGKRKPQLILLDHGLYKELDFPTR 400
           V++AFA+M FKHGFVHCDPHAAN+LVRP+P G+RS +GKRKPQL+LLDHGLYKELDF TR
Sbjct: 318 VSEAFADMMFKHGFVHCDPHAANLLVRPMPSGERSFLGKRKPQLVLLDHGLYKELDFHTR 377

Query: 401 INYAALWKALVFAD 442
            NYAALWK L+F+D
Sbjct: 378 ANYAALWKGLIFSD 391



 Score = 89.0 bits (219), Expect(2) = 7e-50
 Identities = 40/54 (74%), Positives = 48/54 (88%)
 Frame = +1

Query: 1   RLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 162
           +LSPH++ YVYAP VYWNL+TSKLLTMEFID A++ DVK IQRLGI+P EVA+L
Sbjct: 264 KLSPHIAHYVYAPMVYWNLTTSKLLTMEFIDGAQVNDVKTIQRLGIRPNEVARL 317


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