BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033361
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_717167.1| hypothetical protein BrnapMp071 [Brassica napus...    65   6e-09

>ref|YP_717167.1| hypothetical protein BrnapMp071 [Brassica napus]
           gi|353526419|ref|YP_004927491.1| orf101e (mitochondrion)
           [Brassica oleracea] gi|353526674|ref|YP_004927843.1|
           orf101e (mitochondrion) [Brassica rapa subsp.
           campestris] gi|353531357|ref|YP_004927746.1| orf101e
           (mitochondrion) [Brassica juncea]
           gi|37591115|dbj|BAC98917.1| hypothetical protein
           [Brassica napus] gi|335354862|gb|AEH43418.1| orf101e
           [Brassica rapa subsp. campestris]
           gi|335354964|gb|AEH43519.1| orf101e [Brassica oleracea]
           gi|335355090|gb|AEH43643.1| orf101e [Brassica juncea]
           gi|339511289|emb|CBX48344.1| unnamed protein product
           [Brassica napus]
          Length = 101

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 8/53 (15%)
 Frame = -1

Query: 136 SMVINLILH-------PVG-TVFMVVPVRIYVDGAFGSHPRSSI*SSYLLFPA 2
           S+ ++LI+H       P G TVFMVVPVRIYVDGAFGSHPR SI SSYLLFPA
Sbjct: 13  SIGLDLIIHGHKSDSSPSGNTVFMVVPVRIYVDGAFGSHPRFSIQSSYLLFPA 65



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 182 DLIVDFHQSIGLDLLIHGHKSDSSPSGNSL 93
           D  VDFHQSIGLDL+IHGHKSDSSPSGN++
Sbjct: 5   DRRVDFHQSIGLDLIIHGHKSDSSPSGNTV 34