BLASTX nr result

ID: Coptis25_contig00031704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031704
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281619.1| PREDICTED: ethylene-responsive transcription...   246   9e-63
ref|XP_002319156.1| AP2/ERF domain-containing transcription fact...   220   4e-55
ref|XP_003554023.1| PREDICTED: ethylene-responsive transcription...   219   9e-55
ref|XP_003548731.1| PREDICTED: ethylene-responsive transcription...   219   1e-54
gb|ABQ85893.1| ERF transcription factor [Pisum sativum]               216   1e-53

>ref|XP_002281619.1| PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis
           vinifera] gi|297739771|emb|CBI29953.3| unnamed protein
           product [Vitis vinifera]
          Length = 260

 Score =  246 bits (627), Expect = 9e-63
 Identities = 136/245 (55%), Positives = 153/245 (62%)
 Frame = -3

Query: 877 VGVRQRPSGRWVAEIKDTTQKIRMWLGTFXXXXXXXXXXXXXACLLRGSNTRTNFITHVS 698
           VGVRQRPSGRWVAEIKDTTQKIRMWLGTF             ACLLRGSNTRTNFI +VS
Sbjct: 33  VGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVS 92

Query: 697 TDSPLALRIRNLLNHKKGAKQHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 518
           ++SPLA RIR LL++KKGAKQ                                       
Sbjct: 93  SNSPLASRIRTLLDNKKGAKQ---------------PKQTSVDSSNISTTIVTPCASSCT 137

Query: 517 XXXXXXXXXDKKHENQICDDGYRPDLSNCSDDFDLGSSQSDLSWFFGNGIDRFPLTQAGL 338
                    +K  E Q+ DD Y+PDLSNCS++ +LGSS+S LSW F  G DRF   Q  L
Sbjct: 138 SSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELGSSESGLSWGFAAGFDRFSFAQQVL 197

Query: 337 DLPKNALLPETSDEVIRITEFERMKVERQISASLYAMNGVQDYFDTVNDPSDGLWDLPPL 158
           DLPKN  L E ++     +EFERMKVERQISASLYAMNGVQ+Y DTV+DPSD LWDLPPL
Sbjct: 198 DLPKNGGLQEAAEG--EFSEFERMKVERQISASLYAMNGVQEYMDTVHDPSDALWDLPPL 255

Query: 157 CQLFC 143
           C LFC
Sbjct: 256 CSLFC 260


>ref|XP_002319156.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222857532|gb|EEE95079.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 270

 Score =  220 bits (561), Expect = 4e-55
 Identities = 133/278 (47%), Positives = 154/278 (55%), Gaps = 5/278 (1%)
 Frame = -3

Query: 976 MELHFQKQQQREISVXXXXXXXXXXXXXXXXXF----VGVRQRPSGRWVAEIKDTTQKIR 809
           ME+HFQ+Q+Q + +                       VGVRQR SGRWVAEIKDTTQKIR
Sbjct: 1   MEIHFQQQKQHKNASIPVSKASKFKGRGRPNSNSNKFVGVRQRTSGRWVAEIKDTTQKIR 60

Query: 808 MWLGTFXXXXXXXXXXXXXACLLRGSNTRTNFITHVSTDSPLALRIRNLLNHKKGAKQHP 629
           MWLGTF             ACLLRGSNTRTNFITHVS DSPLA RIRNLLN+K+  +Q  
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSVDSPLASRIRNLLNNKRRDQQQ- 119

Query: 628 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKHE-NQICDDGY 452
                                                            HE + + DD Y
Sbjct: 120 -----HSEEETAEASTPPTSTITTTSSTITTSSSSSSSSGMSDNYSSSIHETDHLFDDAY 174

Query: 451 RPDLSNCSDDFDLGSSQSDLSWFFGNGIDRFPLTQAGLDLPKNALLPETSDEVIRITEFE 272
           +PDL NC ++F LGSSQSDLS  FG   DRF   Q  LD PK+ +LPE SD     +EF+
Sbjct: 175 KPDLRNCIEEFKLGSSQSDLSRGFGPLFDRFSYAQEVLDFPKSVVLPEASDS--EFSEFD 232

Query: 271 RMKVERQISASLYAMNGVQDYFDTVNDPSDGLWDLPPL 158
           RMKVERQISASLYA+NGVQ+Y + V DP + LWDLPPL
Sbjct: 233 RMKVERQISASLYAINGVQEYMEAVYDPIEALWDLPPL 270


>ref|XP_003554023.1| PREDICTED: ethylene-responsive transcription factor RAP2-11-like
           [Glycine max]
          Length = 275

 Score =  219 bits (558), Expect = 9e-55
 Identities = 132/283 (46%), Positives = 159/283 (56%), Gaps = 5/283 (1%)
 Frame = -3

Query: 976 MELHFQK----QQQREISVXXXXXXXXXXXXXXXXXFVGVRQRPSGRWVAEIKDTTQKIR 809
           ME+ FQ+     Q+  I++                 FVGVRQRPSGRWVAEIKDTTQKIR
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSRNNNTNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 808 MWLGTFXXXXXXXXXXXXXACLLRGSNTRTNFITHVSTDSPLALRIRNLLNHKKGAKQHP 629
           MWLGTF             ACLLRGSNTRTNFITHVS DSPLA RIRNLLN++KG K+  
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKEE 120

Query: 628 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKHENQICDDGYR 449
                                                              + + DD Y+
Sbjct: 121 ----DANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYK 176

Query: 448 PDLSNCSDDFDLGSSQSDLSWFFGNGIDRFPLTQAGLDLPK-NALLPETSDEVIRITEFE 272
           PDLSNC ++F+ G  QS+ SW FG   DRFP+ Q   D+PK +  L   +D  + ++EFE
Sbjct: 177 PDLSNCREEFESGH-QSNTSWCFGPVFDRFPMAQI-FDIPKIDDGLTNAAD--LDLSEFE 232

Query: 271 RMKVERQISASLYAMNGVQDYFDTVNDPSDGLWDLPPLCQLFC 143
           RMKVERQISASLYA+NGVQ+Y +TV D ++ LWDLPPLC LFC
Sbjct: 233 RMKVERQISASLYAINGVQEYMETVQDSNETLWDLPPLCSLFC 275


>ref|XP_003548731.1| PREDICTED: ethylene-responsive transcription factor RAP2-11-like
           [Glycine max]
          Length = 285

 Score =  219 bits (557), Expect = 1e-54
 Identities = 136/289 (47%), Positives = 159/289 (55%), Gaps = 11/289 (3%)
 Frame = -3

Query: 976 MELHFQK----QQQREISVXXXXXXXXXXXXXXXXXFVGVRQRPSGRWVAEIKDTTQKIR 809
           ME+ FQ+    QQ+  I++                 FVGVRQRPSGRWVAEIKDTTQKIR
Sbjct: 1   MEIQFQQPNLQQQKSGIAITKGGKLKGRSRSNNTNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 808 MWLGTFXXXXXXXXXXXXXACLLRGSNTRTNFITHVSTDSPLALRIRNLL-NHKKGAKQH 632
           MWLGTF             ACLLRGSNTRTNFITHVS DSPLA RIRNLL N K   KQ 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGVKKQE 120

Query: 631 PLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKHEN----QIC 464
                                                               N     + 
Sbjct: 121 DTNANANNAPAPKVTTTRSASTCTSTSTSTSTSTSSNSSNGNDKNDKSLSTANTRSSNLF 180

Query: 463 DDGYRPDLSNCSDDFDLGSSQSDLSWFFGNGIDRFPLTQAGLDLPK--NALLPETSDEVI 290
           DD Y+PDLSNC ++F+ G  QS+ SW FG   DRFP+ Q  LD+PK  + LL   +D  +
Sbjct: 181 DDAYKPDLSNCREEFESGH-QSNASWGFGTVFDRFPIAQI-LDIPKIDDGLLTNAAD--L 236

Query: 289 RITEFERMKVERQISASLYAMNGVQDYFDTVNDPSDGLWDLPPLCQLFC 143
            ++EFERMKVERQISASLYA+NGVQ+Y +TV D +D LWDLPPLC +FC
Sbjct: 237 ELSEFERMKVERQISASLYAINGVQEYMETVQDSNDTLWDLPPLCSMFC 285


>gb|ABQ85893.1| ERF transcription factor [Pisum sativum]
          Length = 248

 Score =  216 bits (549), Expect = 1e-53
 Identities = 123/246 (50%), Positives = 147/246 (59%), Gaps = 2/246 (0%)
 Frame = -3

Query: 877 VGVRQRPSGRWVAEIKDTTQKIRMWLGTFXXXXXXXXXXXXXACLLRGSNTRTNFITHVS 698
           VGVRQRPSGRWVAEIKDTTQKIRMWLGTF             ACLLRGSNTRTNFITHVS
Sbjct: 15  VGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVS 74

Query: 697 TDSPLALRIRNLLNHKKGAKQHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 518
            DSPLA RIRNLLN++KG K+                                       
Sbjct: 75  LDSPLASRIRNLLNNRKGEKKQ---------EDNAVASAPSNIKAPTSSNTDTNTVTSND 125

Query: 517 XXXXXXXXXDKKHENQICDDGYRPDLSNCSDDFDLGSSQSDLSWFFGNGIDRFPLTQAGL 338
                    +     ++ +DGY+PDLSNC +DF+ G SQS+ SW FG   D FP  Q  L
Sbjct: 126 DNKENSLSSEATQNKELFEDGYKPDLSNCKEDFESG-SQSNFSWGFGPVFDHFPFAQL-L 183

Query: 337 DLPKN--ALLPETSDEVIRITEFERMKVERQISASLYAMNGVQDYFDTVNDPSDGLWDLP 164
           D+ KN   ++  +S   + ++EFERMKVERQISASLYA+NGV +Y + V+D ++ LWDLP
Sbjct: 184 DITKNNDGMIDASS---LELSEFERMKVERQISASLYAINGVHEYMEAVHDSNEXLWDLP 240

Query: 163 PLCQLF 146
           PLC LF
Sbjct: 241 PLCSLF 246


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