BLASTX nr result

ID: Coptis25_contig00031565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031565
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525438.1| conserved hypothetical protein [Ricinus comm...   194   8e-48
ref|XP_002319697.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
emb|CBI29933.3| unnamed protein product [Vitis vinifera]              186   1e-45
ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262...   186   1e-45
emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]   186   1e-45

>ref|XP_002525438.1| conserved hypothetical protein [Ricinus communis]
           gi|223535251|gb|EEF36928.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score =  194 bits (492), Expect = 8e-48
 Identities = 99/158 (62%), Positives = 123/158 (77%), Gaps = 2/158 (1%)
 Frame = -2

Query: 470 RSGLRILNVGAVERNSQKRLSAIQMVNFLMKSLDVRSIFSELDIVIEELEKCHSDQMAFV 291
           +SGLRILN G  E NSQKRLSAIQM+NFLMK LD RSI SE+D++IEE+EKC SDQMA+V
Sbjct: 219 QSGLRILNTGVAEGNSQKRLSAIQMINFLMKCLDPRSIISEIDLIIEEMEKCQSDQMAYV 278

Query: 290 KGAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSNR--RKNLRNARDRSPFSTSPES 117
            GAAFEALQTAK ++ ++  KF++   SVTGSNFGR +   R+NL +  + SP S SPES
Sbjct: 279 SGAAFEALQTAKKISTDKGLKFDKSPVSVTGSNFGRRDHRGRRNLSSPGNHSPTSVSPES 338

Query: 116 QTVDSFIRYNSFEESPMSTGQVSCNFSYGGRSVSRKLW 3
           QT+DSFI Y+S  +SP+S+ Q+S N  Y  RSV+RKLW
Sbjct: 339 QTLDSFIEYDSLADSPVSSTQISHNMEYDRRSVNRKLW 376


>ref|XP_002319697.1| predicted protein [Populus trichocarpa] gi|222858073|gb|EEE95620.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  192 bits (488), Expect = 2e-47
 Identities = 105/159 (66%), Positives = 125/159 (78%), Gaps = 3/159 (1%)
 Frame = -2

Query: 470 RSGLRILNVGAVERNSQKRLSAIQMVNFLMKSLDVRSIFSELDIVIEELEKCHSDQMAFV 291
           +SGLRIL  G +E NSQKRLSAIQM+NFLMK LD RSIFSEL+++IEE++KC SDQMAFV
Sbjct: 219 QSGLRILKAGVLEGNSQKRLSAIQMINFLMKCLDPRSIFSELELIIEEMDKCQSDQMAFV 278

Query: 290 KGAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSNR--RKNLRNA-RDRSPFSTSPE 120
            GAAFEALQTAK +A E+  KFE+ SGSV+GSNFGR +   R+NL +A  D+SP S SPE
Sbjct: 279 SGAAFEALQTAKKIATEKGTKFEKSSGSVSGSNFGRRDHRGRRNLSSAYGDQSPASVSPE 338

Query: 119 SQTVDSFIRYNSFEESPMSTGQVSCNFSYGGRSVSRKLW 3
           SQT+D F+ Y SF ESP+ST  VS N    G SV+RKLW
Sbjct: 339 SQTLDFFMEYESFTESPISTTNVSSNECDRG-SVNRKLW 376


>emb|CBI29933.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  186 bits (473), Expect = 1e-45
 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 2/158 (1%)
 Frame = -2

Query: 470 RSGLRILNVGAVERNSQKRLSAIQMVNFLMKSLDVRSIFSELDIVIEELEKCHSDQMAFV 291
           +SGLRILN G  E NSQKRLSAIQMVNFLMK LD RSIFSEL ++I+E+E C SDQMA+V
Sbjct: 327 QSGLRILNAGIDEANSQKRLSAIQMVNFLMKCLDPRSIFSELGLIIKEMENCQSDQMAYV 386

Query: 290 KGAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSN--RRKNLRNARDRSPFSTSPES 117
           +GAA+EALQTA+ + +E+  KF++D G   GSN  R +  +RKNL +  D+SPFS SPES
Sbjct: 387 RGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSPES 446

Query: 116 QTVDSFIRYNSFEESPMSTGQVSCNFSYGGRSVSRKLW 3
           QT+DSF+ Y S  ESP+ST QVS N  Y   S +RKLW
Sbjct: 447 QTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLW 484


>ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262437 [Vitis vinifera]
          Length = 615

 Score =  186 bits (473), Expect = 1e-45
 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 2/158 (1%)
 Frame = -2

Query: 470 RSGLRILNVGAVERNSQKRLSAIQMVNFLMKSLDVRSIFSELDIVIEELEKCHSDQMAFV 291
           +SGLRILN G  E NSQKRLSAIQMVNFLMK LD RSIFSEL ++I+E+E C SDQMA+V
Sbjct: 219 QSGLRILNAGIDEANSQKRLSAIQMVNFLMKCLDPRSIFSELGLIIKEMENCQSDQMAYV 278

Query: 290 KGAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSN--RRKNLRNARDRSPFSTSPES 117
           +GAA+EALQTA+ + +E+  KF++D G   GSN  R +  +RKNL +  D+SPFS SPES
Sbjct: 279 RGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSPES 338

Query: 116 QTVDSFIRYNSFEESPMSTGQVSCNFSYGGRSVSRKLW 3
           QT+DSF+ Y S  ESP+ST QVS N  Y   S +RKLW
Sbjct: 339 QTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLW 376


>emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]
          Length = 615

 Score =  186 bits (473), Expect = 1e-45
 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 2/158 (1%)
 Frame = -2

Query: 470 RSGLRILNVGAVERNSQKRLSAIQMVNFLMKSLDVRSIFSELDIVIEELEKCHSDQMAFV 291
           +SGLRILN G  E NSQKRLSAIQMVNFLMK LD RSIFSEL ++I+E+E C SDQMA+V
Sbjct: 219 QSGLRILNAGIDEANSQKRLSAIQMVNFLMKCLDPRSIFSELGLIIKEMENCQSDQMAYV 278

Query: 290 KGAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSN--RRKNLRNARDRSPFSTSPES 117
           +GAA+EALQTA+ + +E+  KF++D G   GSN  R +  +RKNL +  D+SPFS SPES
Sbjct: 279 RGAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSPES 338

Query: 116 QTVDSFIRYNSFEESPMSTGQVSCNFSYGGRSVSRKLW 3
           QT+DSF+ Y S  ESP+ST QVS N  Y   S +RKLW
Sbjct: 339 QTLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLW 376


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