BLASTX nr result

ID: Coptis25_contig00030974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030974
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258...   264   9e-69
ref|XP_002525339.1| conserved hypothetical protein [Ricinus comm...   249   3e-64
ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thal...   228   6e-58
ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225...   227   2e-57

>ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258570 [Vitis vinifera]
           gi|297739214|emb|CBI28865.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  264 bits (675), Expect = 9e-69
 Identities = 133/213 (62%), Positives = 159/213 (74%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   FTTLNKWHGINTALHRIIDTRTALPVSGSRSVSKRNDKVSSSVLWSRAVFAISKEVKNEE 182
           FTTLNKWH +NTAL RII++      S S +VS   DKVS+S LW RA+FA+S      E
Sbjct: 123 FTTLNKWHSLNTALRRIIESNK----SSSNAVS---DKVSTSALWDRALFALSARWNAAE 175

Query: 183 IDEILGFNEKGKVVSIEEKSYFREAMLSLRLAKEVIEVHKKWRGNAARELNRSGGYSRSL 362
           ID ++G  EKGK VS+EE SYFREAM+ LRLAKEVI+V + WR NA   LNRSGGYSRSL
Sbjct: 176 IDRVMGLGEKGKAVSMEEASYFREAMVGLRLAKEVIKVQQGWRANAVAHLNRSGGYSRSL 235

Query: 363 ANCFTDWPCXXXXXXXXXAELGYFQPKLVINNIEILRYA-TTDDTTVSAQMYHDSFLWRL 539
           AN  TDWPC         AE+G+FQPKL+INNI++LR+A  TDD+TV A MYHDS LWR+
Sbjct: 236 ANSATDWPCLLLELLSQAAEIGFFQPKLIINNIDVLRHAILTDDSTVCASMYHDSLLWRI 295

Query: 540 IALGINERSLPVILVTSDSYYSYRVTFDFGYQE 638
           IALG+NER LPV+LVTSDSYYSY+   DFG+ +
Sbjct: 296 IALGVNERCLPVVLVTSDSYYSYQAYLDFGFPD 328


>ref|XP_002525339.1| conserved hypothetical protein [Ricinus communis]
           gi|223535398|gb|EEF37072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 569

 Score =  249 bits (636), Expect = 3e-64
 Identities = 129/213 (60%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   FTTLNKWHGINTALHRIIDTRTALPVSGSRSVSKRNDKVSSSVLWSRAVFAISKEVKNEE 182
           F+TLNKWH ++TAL R++   +   ++ SRS    +DKVS SVLW RAVFA+S     +E
Sbjct: 123 FSTLNKWHHLDTALRRMV-VESGNKIT-SRSRKGISDKVSGSVLWERAVFALSVRSNAKE 180

Query: 183 IDEILGFNEKGKVVSIEEKSYFREAMLSLRLAKEVIEVHKKWRGNAARELNRSGGYSRSL 362
           IDEIL  +EKGK +S+EE SYFR+A+++LRLAKEVIE+   WRGNA   LNRSGG+SRSL
Sbjct: 181 IDEILELDEKGKNLSLEEASYFRDAIVALRLAKEVIEMQHGWRGNAIAHLNRSGGFSRSL 240

Query: 363 ANCFTDWPCXXXXXXXXXAELGYFQPKLVINNIEILRYA-TTDDTTVSAQMYHDSFLWRL 539
           AN  TDWPC         AE+ YFQPKLVINNIE+L+ A  TDD+ VS  MYHDS +WR+
Sbjct: 241 ANSCTDWPCLLLELLSQAAEIDYFQPKLVINNIEVLKNAILTDDSIVSGSMYHDSLIWRI 300

Query: 540 IALGINERSLPVILVTSDSYYSYRVTFDFGYQE 638
           IALG NER LPV+LVTSDSYYSYR   DFG+ +
Sbjct: 301 IALGANERCLPVMLVTSDSYYSYRAYMDFGFPD 333


>ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|222844584|gb|EEE82131.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  239 bits (611), Expect = 2e-61
 Identities = 122/215 (56%), Positives = 154/215 (71%), Gaps = 3/215 (1%)
 Frame = +3

Query: 3   FTTLNKWHGINTALHRIIDTRTALPVSGSRSVSKRN--DKVSSSVLWSRAVFAISKEVKN 176
           F+TLNKWH ++T L RI+     L  + + ++  RN   KVSSSVLW RAVFA+S     
Sbjct: 123 FSTLNKWHRLDTVLRRIL-----LQNNSNIALKSRNAISKVSSSVLWDRAVFALSARSNA 177

Query: 177 EEIDEILGFNEKGKVVSIEEKSYFREAMLSLRLAKEVIEVHKKWRGNAARELNRSGGYSR 356
           +EIDEILG  EKGK +S+EE SYFREA ++LRLAKEVI + + WR +A   LNR+GG+SR
Sbjct: 178 KEIDEILGLEEKGKSLSVEEASYFREAFVALRLAKEVITMQQGWRASAIAHLNRTGGFSR 237

Query: 357 SLANCFTDWPCXXXXXXXXXAELGYFQPKLVINNIEILRYA-TTDDTTVSAQMYHDSFLW 533
           SLAN  TDWPC         AE+ YFQPKLVINNIE+L+ A   DD+ VS  MYHDS +W
Sbjct: 238 SLANSCTDWPCLLLELLSKAAEIDYFQPKLVINNIEVLKKAILVDDSMVSGPMYHDSLIW 297

Query: 534 RLIALGINERSLPVILVTSDSYYSYRVTFDFGYQE 638
           R++ALG NER LP++L TSDSYYSY+  +DFG+ +
Sbjct: 298 RIVALGANERCLPIMLATSDSYYSYQAYWDFGFPD 332


>ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thaliana]
           gi|330253435|gb|AEC08529.1| embryo defective 1381
           protein [Arabidopsis thaliana]
          Length = 559

 Score =  228 bits (582), Expect = 6e-58
 Identities = 116/214 (54%), Positives = 149/214 (69%), Gaps = 2/214 (0%)
 Frame = +3

Query: 3   FTTLNKWHGINTALHRIIDT-RTALPVSGSRSVSKRNDKVSSSVLWSRAVFAISKEVKNE 179
           FTT+NKW+G+NTAL RI+     A+P           +KVS S LW RAV+A+S     +
Sbjct: 123 FTTMNKWYGLNTALRRILQGYNIAVP-----------EKVSVSFLWERAVYALSVRQNAD 171

Query: 180 EIDEILGFNEKGKVVSIEEKSYFREAMLSLRLAKEVIEVHKKWRGNAARELNRSGGYSRS 359
           EID +L   EKG  +S+EE SY+RE   +LRLAKEVI+VH+ W+ NA   LNR+ G+SR+
Sbjct: 172 EIDGLLELEEKGNSLSVEEASYYRETAFALRLAKEVIKVHQGWKANAIAHLNRTNGFSRT 231

Query: 360 LANCFTDWPCXXXXXXXXXAELGYFQPKLVINNIEILRYA-TTDDTTVSAQMYHDSFLWR 536
           LAN  TDWP          AE+G+FQPKLV+NNIEIL+ A  TDD+TVSA MYHD+ +WR
Sbjct: 232 LANSCTDWPLLMLELLSQAAEIGFFQPKLVLNNIEILKRAIQTDDSTVSASMYHDNLIWR 291

Query: 537 LIALGINERSLPVILVTSDSYYSYRVTFDFGYQE 638
           +IALG NER LPV+ VTSDSYYSY+   D+G+ +
Sbjct: 292 IIALGANERCLPVLFVTSDSYYSYQAFVDYGFPD 325


>ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225211 [Cucumis sativus]
          Length = 563

 Score =  227 bits (578), Expect = 2e-57
 Identities = 112/214 (52%), Positives = 147/214 (68%), Gaps = 2/214 (0%)
 Frame = +3

Query: 3   FTTLNKWHGINTALHRIIDTRTALPVSGSRSVSKRNDKVSSSVLWSRAVFAISKEVKNEE 182
           FTT+NKWHG+NTAL R++    A      R VS+R    SSS LW +AVFA+S      E
Sbjct: 123 FTTMNKWHGLNTALRRVLQVDNA----SKRVVSRR---ASSSALWDQAVFALSARCNAAE 175

Query: 183 IDEILGFNEKGKVVSIEEKSYFREAMLSLRLAKEVIEVHKKWRGNAARELNRSGGYSRSL 362
           +D +L   E+G+ +  EE SYFREA ++L+LAKE+I + + WR NA  +LNR+GG+S SL
Sbjct: 176 LDGVLELGEEGRSIPFEEASYFREAFVALKLAKELIRIQQGWRANAIADLNRTGGFSTSL 235

Query: 363 ANCFTDWPCXXXXXXXXXAELGYFQPKLVINNIEILRYATTD--DTTVSAQMYHDSFLWR 536
           A+  TDWPC         AE+ +FQPKL+INN+++LR A+    D++V   MYHDS +WR
Sbjct: 236 AHSCTDWPCLLIELLSQAAEINHFQPKLIINNVDVLRNASLSDGDSSVCGSMYHDSLVWR 295

Query: 537 LIALGINERSLPVILVTSDSYYSYRVTFDFGYQE 638
           +IALG NER LPVILVTSDSYYSYR   DFG+ +
Sbjct: 296 IIALGANERCLPVILVTSDSYYSYRAYMDFGFPD 329


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