BLASTX nr result

ID: Coptis25_contig00030946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030946
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595873.1| ABC transporter D family member [Medicago tr...   284   6e-75
gb|ABN08200.1| AAA ATPase; ABC transporter, transmembrane region...   284   6e-75
emb|CBI24120.3| unnamed protein product [Vitis vinifera]              282   2e-74
ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...   282   2e-74
ref|XP_002315097.1| peroxisomal membrane ABC transporter family,...   282   2e-74

>ref|XP_003595873.1| ABC transporter D family member [Medicago truncatula]
           gi|355484921|gb|AES66124.1| ABC transporter D family
           member [Medicago truncatula]
          Length = 906

 Score =  284 bits (726), Expect = 6e-75
 Identities = 142/157 (90%), Positives = 151/157 (96%)
 Frame = -3

Query: 471 TLALRWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFN 292
           TL+LRWRSWMT YY++RYLK+QTFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSL  FN
Sbjct: 350 TLSLRWRSWMTRYYMDRYLKDQTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLALFN 409

Query: 291 AAIDLISFSNILYGIYPPLFGVLLAYSIGGTAISVYLGRGLVTLNFLQEKKEADFRYGLV 112
           AAIDLISFSNILYGIYPPLF VLL YSIGGTAISV+LG+GLVTLNFLQEKKEADFRYGLV
Sbjct: 410 AAIDLISFSNILYGIYPPLFVVLLIYSIGGTAISVFLGKGLVTLNFLQEKKEADFRYGLV 469

Query: 111 RVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLL 1
           RVRENAESIAFYGGEE+EMQLLLQRFKSAFENL+QLL
Sbjct: 470 RVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLL 506


>gb|ABN08200.1| AAA ATPase; ABC transporter, transmembrane region, type 1 [Medicago
           truncatula]
          Length = 613

 Score =  284 bits (726), Expect = 6e-75
 Identities = 142/157 (90%), Positives = 151/157 (96%)
 Frame = -3

Query: 471 TLALRWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFN 292
           TL+LRWRSWMT YY++RYLK+QTFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSL  FN
Sbjct: 57  TLSLRWRSWMTRYYMDRYLKDQTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLALFN 116

Query: 291 AAIDLISFSNILYGIYPPLFGVLLAYSIGGTAISVYLGRGLVTLNFLQEKKEADFRYGLV 112
           AAIDLISFSNILYGIYPPLF VLL YSIGGTAISV+LG+GLVTLNFLQEKKEADFRYGLV
Sbjct: 117 AAIDLISFSNILYGIYPPLFVVLLIYSIGGTAISVFLGKGLVTLNFLQEKKEADFRYGLV 176

Query: 111 RVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLL 1
           RVRENAESIAFYGGEE+EMQLLLQRFKSAFENL+QLL
Sbjct: 177 RVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLL 213


>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  282 bits (722), Expect = 2e-74
 Identities = 140/156 (89%), Positives = 149/156 (95%)
 Frame = -3

Query: 468 LALRWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 289
           LALRWRSWMTSYY+ERYLKN TFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSL FFNA
Sbjct: 157 LALRWRSWMTSYYMERYLKNWTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLAFFNA 216

Query: 288 AIDLISFSNILYGIYPPLFGVLLAYSIGGTAISVYLGRGLVTLNFLQEKKEADFRYGLVR 109
           A+DLISFSNILYGIYPPLF VLL YSIGGTAISV+LGRGLV LNFLQEKKEADFRYGLVR
Sbjct: 217 AVDLISFSNILYGIYPPLFVVLLVYSIGGTAISVFLGRGLVNLNFLQEKKEADFRYGLVR 276

Query: 108 VRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLL 1
           +RENAESIAFY GEE+EMQLL+QRF+SAFENL+QLL
Sbjct: 277 IRENAESIAFYSGEESEMQLLIQRFRSAFENLTQLL 312


>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Vitis vinifera]
          Length = 722

 Score =  282 bits (722), Expect = 2e-74
 Identities = 140/156 (89%), Positives = 149/156 (95%)
 Frame = -3

Query: 468 LALRWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 289
           LALRWRSWMTSYY+ERYLKN TFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSL FFNA
Sbjct: 157 LALRWRSWMTSYYMERYLKNWTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLAFFNA 216

Query: 288 AIDLISFSNILYGIYPPLFGVLLAYSIGGTAISVYLGRGLVTLNFLQEKKEADFRYGLVR 109
           A+DLISFSNILYGIYPPLF VLL YSIGGTAISV+LGRGLV LNFLQEKKEADFRYGLVR
Sbjct: 217 AVDLISFSNILYGIYPPLFVVLLVYSIGGTAISVFLGRGLVNLNFLQEKKEADFRYGLVR 276

Query: 108 VRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLL 1
           +RENAESIAFY GEE+EMQLL+QRF+SAFENL+QLL
Sbjct: 277 IRENAESIAFYSGEESEMQLLIQRFRSAFENLTQLL 312


>ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus
           trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal
           membrane ABC transporter family, PMP family [Populus
           trichocarpa]
          Length = 651

 Score =  282 bits (722), Expect = 2e-74
 Identities = 141/156 (90%), Positives = 150/156 (96%)
 Frame = -3

Query: 468 LALRWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 289
           L LRWRSWMT +Y+ERYLKNQTFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSLT FNA
Sbjct: 96  LGLRWRSWMTKFYMERYLKNQTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLTLFNA 155

Query: 288 AIDLISFSNILYGIYPPLFGVLLAYSIGGTAISVYLGRGLVTLNFLQEKKEADFRYGLVR 109
           A+DLISFSNILYGIYPPLF VLLAYSIGGTAISV+LGR LVTLNFLQEKKEADFRYGLVR
Sbjct: 156 AVDLISFSNILYGIYPPLFVVLLAYSIGGTAISVFLGRELVTLNFLQEKKEADFRYGLVR 215

Query: 108 VRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLL 1
           VRENAESIAF+GGEENE+QLLLQRFKSAFENL++LL
Sbjct: 216 VRENAESIAFFGGEENEIQLLLQRFKSAFENLTRLL 251


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