BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030564
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   134   1e-29
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   134   3e-29
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   134   3e-29
gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indi...   133   3e-29
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   132   7e-29

>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score =  134 bits (338), Expect = 1e-29
 Identities = 84/252 (33%), Positives = 120/252 (47%), Gaps = 12/252 (4%)
 Frame = +1

Query: 7    NVALLGKHVWSLLQ-PSSLWASHMKAKYFPSTKFLRAKCPKNASLVWKSLFKLKHLLAYG 183
            N+ALL K  W +LQ P SL A   KAKYFP  + L AK    +S  WKS+     L++ G
Sbjct: 317  NIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSSYAWKSILHGTKLISRG 376

Query: 184  LRWNIGNGISVRAWLNSWVPDTPFTLPLQTQPEGCHLDRVSDFIDPVLRSWNVDLLSMYW 363
            L++  GNG +++ W ++W+P  P   P+ T        +VSD +  +   WN DLL    
Sbjct: 377  LKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKVSDLL--IEGRWNEDLLCKLI 434

Query: 364  PPIYVERILSISLHIHPHEDSIFWAPNKHGIYTVKSAYAKVMEYLQPEVDLHASL----- 528
                +  I +I   I    D+I W     G Y+VKS Y  + +  Q +   HASL     
Sbjct: 435  HQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQ---HASLPSPNE 491

Query: 529  ------YRKIWSLPVPYNMRFFLWQPVHGVIPTSDFLATKSFIVDPTCYLCAQASESQVH 690
                  +  IW    P  ++ F W+  H  +PT+  L  +  I D TC  C +ASE   H
Sbjct: 492  VSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNH 551

Query: 691  LFDNCSFSRVVW 726
            L   C  S+ +W
Sbjct: 552  LLFQCRVSKEIW 563


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  134 bits (336), Expect = 3e-29
 Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 14/254 (5%)
 Frame = +1

Query: 7   NVALLGKHVWSLLQ-PSSLWASHMKAKYFPSTKFLRAKCPKNASLVWKSLFKLKHLLAYG 183
           N+A+L K  W L+Q P SL A  +KAKY+PS     AK   N S  W+S+ +    L  G
Sbjct: 100 NLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRDG 159

Query: 184 LRWNIGNGISVRAWLNSWVPDTPFTLPLQTQPEGCHL-DRVSDFIDPVLRSWNVDLLSMY 360
           + W +GNG ++  W + W+P      P+   P G +L  RV + IDP   SW+V+LL+  
Sbjct: 160 MIWRVGNGAAINIWSDPWIPSDHTRRPI--TPRGRNLVTRVEELIDPSTGSWDVELLTQT 217

Query: 361 WPPIYVERILSISLHIHPHEDSIFWAPNKHGIYTVKSAYAKVME--YLQPEVDLHASL-- 528
           + P  V  I +I +HI   +D + W  ++ G+++VKSAY KV     LQ      A L  
Sbjct: 218 FWPEDVNMIRTIPVHIE-MDDMLAWHYDEKGLFSVKSAY-KVQRDGELQRRKRGSAGLSN 275

Query: 529 --------YRKIWSLPVPYNMRFFLWQPVHGVIPTSDFLATKSFIVDPTCYLCAQASESQ 684
                   ++K+W + +P  ++ F+W+  H ++     L  +   +D  C +C + +E  
Sbjct: 276 GSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDA 335

Query: 685 VHLFDNCSFSRVVW 726
            HLF  C   + VW
Sbjct: 336 GHLFFKCKKVKKVW 349


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  134 bits (336), Expect = 3e-29
 Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 14/254 (5%)
 Frame = +1

Query: 7    NVALLGKHVWSLLQ-PSSLWASHMKAKYFPSTKFLRAKCPKNASLVWKSLFKLKHLLAYG 183
            N+A+L K  W L+Q P SL A  +KAKY+PS     AK   N S  W+S+ +    L  G
Sbjct: 993  NLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRDG 1052

Query: 184  LRWNIGNGISVRAWLNSWVPDTPFTLPLQTQPEGCHL-DRVSDFIDPVLRSWNVDLLSMY 360
            + W +GNG ++  W + W+P      P+   P G +L  RV + IDP   SW+V+LL+  
Sbjct: 1053 MIWRVGNGAAINIWSDPWIPSDHTRRPI--TPRGRNLVTRVEELIDPSTGSWDVELLTQT 1110

Query: 361  WPPIYVERILSISLHIHPHEDSIFWAPNKHGIYTVKSAYAKVME--YLQPEVDLHASL-- 528
            + P  V  I +I +HI   +D + W  ++ G+++VKSAY KV     LQ      A L  
Sbjct: 1111 FWPEDVNMIRTIPVHIE-MDDMLAWHYDEKGLFSVKSAY-KVQRDGELQRRKRGSAGLSN 1168

Query: 529  --------YRKIWSLPVPYNMRFFLWQPVHGVIPTSDFLATKSFIVDPTCYLCAQASESQ 684
                    ++K+W + +P  ++ F+W+  H ++     L  +   +D  C +C + +E  
Sbjct: 1169 GSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDA 1228

Query: 685  VHLFDNCSFSRVVW 726
             HLF  C   + VW
Sbjct: 1229 GHLFFKCKKVKKVW 1242


>gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indica Group]
          Length = 556

 Score =  133 bits (335), Expect = 3e-29
 Identities = 80/247 (32%), Positives = 122/247 (49%), Gaps = 7/247 (2%)
 Frame = +1

Query: 7    NVALLGKHVWSLL-QPSSLWASHMKAKYFPSTKFLRAKCPKNASLVWKSLFKLKHLLAYG 183
            N ALL +  W LL +P SL A  +KAKY+P+   +      NAS  W+++     LL  G
Sbjct: 269  NQALLARQAWRLLDRPDSLCARILKAKYYPNGSLIDTSFGGNASPGWRAIEYGLELLKKG 328

Query: 184  LRWNIGNGISVRAWLNSWVPDTPFTLPLQTQPEGCHLDRVSDFIDPVLRSWNVDLLSMYW 363
            + W IGNG SVR W + W+P +    P+  +   C L  VSD ID    SW+ D +S ++
Sbjct: 329  IIWRIGNGKSVRLWRDPWIPRSFSRRPISAK-RNCRLRWVSDLIDQ-SESWDTDKISQHF 386

Query: 364  PPIYVERILSISLHIHPHEDSIFWAPNKHGIYTVKSAY------AKVMEYLQPEVDLHAS 525
             P+  E IL+I L     +D I W P++ G ++V+SAY      A+V E      + ++ 
Sbjct: 387  LPMDAEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIALAQVDEGSSSSGNGNSR 446

Query: 526  LYRKIWSLPVPYNMRFFLWQPVHGVIPTSDFLATKSFIVDPTCYLCAQASESQVHLFDNC 705
             +  +W    P  ++ F W+ +   +PT +    +   V   C +C   SE  VH    C
Sbjct: 447  AWNALWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICGVESEYVVHALFRC 506

Query: 706  SFSRVVW 726
              +R  W
Sbjct: 507  PHARQFW 513


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  132 bits (332), Expect = 7e-29
 Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 18/258 (6%)
 Frame = +1

Query: 7    NVALLGKHVWSLLQ-PSSLWASHMKAKYFPSTKFLRAKCPKNASLVWKSLFKLKHLLAYG 183
            N+A+L K  W L+Q P SL +  ++AKYFP     R K   N S  W+S+ K   +L  G
Sbjct: 1118 NLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNG 1177

Query: 184  LRWNIGNGISVRAWLNSWVPDTPFTLPLQTQPEGCHL-DRVSDFIDPVLRSWNVDLLSMY 360
            + W +G+G  +  W + W+P      P+   P G +L  +V + IDP   +W+ DLLS  
Sbjct: 1178 MIWRVGDGSKINIWADPWIPRGWSRKPM--TPRGANLVTKVEELIDPYTGTWDEDLLSQT 1235

Query: 361  WPPIYVERILSISLHIHPHEDSIFWAPNKHGIYTVKSAYAKVMEYLQPEVDLHAS----- 525
            +    V  I SI +H+   ED + W  +  G +TVKSAY      +Q E++  AS     
Sbjct: 1236 FWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYK-----VQREMERRASRNGCP 1289

Query: 526  -----------LYRKIWSLPVPYNMRFFLWQPVHGVIPTSDFLATKSFIVDPTCYLCAQA 672
                        ++K+W L VP  ++ FLW+  H  +     L  +   VD  C +C + 
Sbjct: 1290 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRY 1349

Query: 673  SESQVHLFDNCSFSRVVW 726
            +E   HLF  C   + VW
Sbjct: 1350 NEDAGHLFFKCKPVKKVW 1367