BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030299
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15109.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   253   1e-65
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   251   5e-65
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   244   5e-63
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...   241   6e-62

>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  253 bits (647), Expect = 1e-65
 Identities = 130/184 (70%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   QNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSAPIVA 182
           Q+VSPTMSIRRK NN+IVPKRDITIAD +KKTVVVSLWNDHATN+GQELLD  D  PIVA
Sbjct: 298 QSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVA 357

Query: 183 IKSLKVGDFQGVXXXXXXXXXXXVNPDVPESKRLRTWYNSEGKETTMDSVGSGMVSNTSW 362
           IKSLKVGDFQGV           VNPD PESK+LR+WY+SEGK  +M S+GS  +S +S 
Sbjct: 358 IKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSD-ISPSSK 416

Query: 363 KGVKSMYSDRVCVSHITSNLSLGDDKP-VFCMKACISNIKPDQTMWYQACKVCNKKVTDG 539
            GVKSMY DRV +SH+TSN SLG+DKP  F ++A IS IKPDQTMWY+ACK CNKKVTD 
Sbjct: 417 GGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRACKTCNKKVTDA 476

Query: 540 IGPG 551
           IG G
Sbjct: 477 IGSG 480


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  253 bits (647), Expect = 1e-65
 Identities = 130/184 (70%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   QNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSAPIVA 182
           Q+VSPTMSIRRK NN+IVPKRDITIAD +KKTVVVSLWNDHATN+GQELLD  D  PIVA
Sbjct: 321 QSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVA 380

Query: 183 IKSLKVGDFQGVXXXXXXXXXXXVNPDVPESKRLRTWYNSEGKETTMDSVGSGMVSNTSW 362
           IKSLKVGDFQGV           VNPD PESK+LR+WY+SEGK  +M S+GS  +S +S 
Sbjct: 381 IKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSD-ISPSSK 439

Query: 363 KGVKSMYSDRVCVSHITSNLSLGDDKP-VFCMKACISNIKPDQTMWYQACKVCNKKVTDG 539
            GVKSMY DRV +SH+TSN SLG+DKP  F ++A IS IKPDQTMWY+ACK CNKKVTD 
Sbjct: 440 GGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRACKTCNKKVTDA 499

Query: 540 IGPG 551
           IG G
Sbjct: 500 IGSG 503


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  251 bits (641), Expect = 5e-65
 Identities = 129/184 (70%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   QNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSAPIVA 182
           Q+VSPTMSIRRK NN+IVPKRDITIAD +KKTVVVSLWNDHATN+GQELLD  D  PIVA
Sbjct: 330 QSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVA 389

Query: 183 IKSLKVGDFQGVXXXXXXXXXXXVNPDVPESKRLRTWYNSEGKETTMDSVGSGMVSNTSW 362
           IKSLKVGDFQGV           VNPD PESK+LR+WY+SEGK  +M S+GS  +S +S 
Sbjct: 390 IKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSD-ISPSSK 448

Query: 363 KGVKSMYSDRVCVSHITSNLSLGDDKP-VFCMKACISNIKPDQTMWYQACKVCNKKVTDG 539
            GV SMY DRV +SH+TSN SLG+DKP  F ++A IS IKPDQTMWY+ACK CNKKVTD 
Sbjct: 449 GGVXSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRACKTCNKKVTDA 508

Query: 540 IGPG 551
           IG G
Sbjct: 509 IGSG 512


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  244 bits (624), Expect = 5e-63
 Identities = 123/184 (66%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   QNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSAPIVA 182
           Q+VSPTMSIRRK NN+IVPKRDITIAD++KKTVVVSLWND AT++GQELLD  D +P+VA
Sbjct: 319 QSVSPTMSIRRKSNNDIVPKRDITIADETKKTVVVSLWNDLATDVGQELLDMADKSPVVA 378

Query: 183 IKSLKVGDFQGVXXXXXXXXXXXVNPDVPESKRLRTWYNSEGKETTMDSVGSGMVSNTSW 362
           IK+LKVGDFQGV           VNPD PESK+L++W++SEGKET++ SVG+G+  +T  
Sbjct: 379 IKALKVGDFQGVSLSTLGRSIIQVNPDTPESKKLKSWFDSEGKETSLASVGAGLSPSTK- 437

Query: 363 KGVKSMYSDRVCVSHITSNLSLGDDKPV-FCMKACISNIKPDQTMWYQACKVCNKKVTDG 539
            G  SMYSDRV +SHITSN SLG DKP  F ++A IS IKPDQ+MWY+ACK CNKKVT+ 
Sbjct: 438 SGGGSMYSDRVSISHITSNPSLGSDKPAFFSIRAYISFIKPDQSMWYRACKTCNKKVTEA 497

Query: 540 IGPG 551
           IG G
Sbjct: 498 IGGG 501


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
           lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
           ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score =  241 bits (615), Expect = 6e-62
 Identities = 120/184 (65%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   QNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSAPIVA 182
           Q+VSPTMSIRR+ +NE++PKRDIT+AD+SKKTVVVSLWND AT IGQELLD  D +P+VA
Sbjct: 326 QSVSPTMSIRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQELLDMADKSPVVA 385

Query: 183 IKSLKVGDFQGVXXXXXXXXXXXVNPDVPESKRLRTWYNSEGKETTMDSVGSGMVSNTSW 362
           IKSLKVGDFQGV           +NP+ PE+K+L++W++SEGKE +M S+GSGM S +S 
Sbjct: 386 IKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSGM-SPSSK 444

Query: 363 KGVKSMYSDRVCVSHITSNLSLGDDKPV-FCMKACISNIKPDQTMWYQACKVCNKKVTDG 539
            G +SMY+DRV +SHITSN SLG++KPV F  +A IS IKPDQTMWYQACK CNKKVT+ 
Sbjct: 445 NGSRSMYTDRVLLSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEA 504

Query: 540 IGPG 551
           +  G
Sbjct: 505 LDSG 508