BLASTX nr result

ID: Coptis25_contig00030093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030093
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...    99   5e-19
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...    98   6e-19
ref|XP_002280103.1| PREDICTED: copper transporter 1 [Vitis vinif...    97   2e-18
ref|NP_001238742.1| uncharacterized protein LOC100306175 [Glycin...    96   2e-18
ref|XP_004153229.1| PREDICTED: copper transporter 6-like [Cucumi...    96   3e-18

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/94 (54%), Positives = 60/94 (63%)
 Frame = +2

Query: 155 MTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXXSHTRLTKGGGTNYVANALV 334
           MTF+WGKD+ +LFSG+PG  TGMY                 SH RL K G  N VA  L+
Sbjct: 32  MTFFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNN-VAAGLI 90

Query: 335 QTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGH 436
           Q  +H VRVGLA++VMLAVMSFN GV I AV+GH
Sbjct: 91  QALMHAVRVGLAYMVMLAVMSFNGGVFIVAVAGH 124


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/96 (50%), Positives = 64/96 (66%)
 Frame = +2

Query: 149 MQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXXSHTRLTKGGGTNYVANA 328
           M MTFYWGK++E+LFSG+PG ++GMY                 S+ RL K G T + A  
Sbjct: 30  MHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGST-HAAAG 88

Query: 329 LVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGH 436
           LVQT +H +R+GLA++VMLA+MSFN GV + AV+GH
Sbjct: 89  LVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGH 124


>ref|XP_002280103.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496080|gb|ADW93917.1| copper transporter [Vitis
           vinifera]
          Length = 164

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/96 (48%), Positives = 62/96 (64%)
 Frame = +2

Query: 149 MQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXXSHTRLTKGGGTNYVANA 328
           M  TF+WGK++E+LFSG+PG +TGMY                 SH++L K   TN +   
Sbjct: 38  MHPTFFWGKNAEILFSGWPGTRTGMYVLSLVFVFVVSVLVEMLSHSQLIKSS-TNSLLGG 96

Query: 329 LVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGH 436
             +T IHGVRVGLA++VMLA+MSFN G+ I AV+GH
Sbjct: 97  AAETIIHGVRVGLAYMVMLALMSFNAGIFIVAVAGH 132


>ref|NP_001238742.1| uncharacterized protein LOC100306175 [Glycine max]
           gi|255627769|gb|ACU14229.1| unknown [Glycine max]
          Length = 155

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/96 (48%), Positives = 64/96 (66%)
 Frame = +2

Query: 149 MQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXXSHTRLTKGGGTNYVANA 328
           M MTF+WGKD+++LF+ +PG K+GMY                 SHTR  K G +N+V + 
Sbjct: 34  MHMTFFWGKDADILFNNWPGGKSGMYVLALVFVFVMAVLVELLSHTRFIKPG-SNHVVSG 92

Query: 329 LVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGH 436
           L++T +H +RVGLA+LVMLA+MSFN GV + AV GH
Sbjct: 93  LIKTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGH 128


>ref|XP_004153229.1| PREDICTED: copper transporter 6-like [Cucumis sativus]
          Length = 158

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/99 (46%), Positives = 66/99 (66%)
 Frame = +2

Query: 140 STSMQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXXSHTRLTKGGGTNYV 319
           S++M MTF+WGK++++LFSG+PG+++GMY                 S  R+    G   V
Sbjct: 28  SSAMHMTFFWGKNTQVLFSGWPGDRSGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPRNV 87

Query: 320 ANALVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGH 436
           A  +VQT +HG+R+G+A+LVMLA+MSFN GV I AV+GH
Sbjct: 88  AAGIVQTAVHGIRMGIAYLVMLALMSFNGGVFIVAVAGH 126


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