BLASTX nr result

ID: Coptis25_contig00027978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027978
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172301.1| PREDICTED: putative peptide/nitrate transpor...   124   6e-27
ref|XP_004147936.1| PREDICTED: putative peptide/nitrate transpor...   124   6e-27
emb|CAN73408.1| hypothetical protein VITISV_024373 [Vitis vinifera]   121   7e-26
ref|XP_002323528.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002312125.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_004172301.1| PREDICTED: putative peptide/nitrate transporter At2g37900-like,
           partial [Cucumis sativus]
          Length = 479

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/85 (69%), Positives = 69/85 (81%)
 Frame = -2

Query: 369 SLGIAFYLSVIGASNFASTLLITTVDHLSSKGGKNSWIGKNLNHSRIDKFYWLLAAINGV 190
           SLGIAFYLSVIGA +F S+ LIT VD ++ + G  SW GKNLN SR+DKFYWLLAA++  
Sbjct: 380 SLGIAFYLSVIGAGSFLSSFLITVVDKITGRSGHTSWFGKNLNTSRLDKFYWLLAAVSAA 439

Query: 189 NLVAYVLIARRYSYKKVQKRVAIAD 115
           NL  YVLIARRYSYK VQ+RVA+AD
Sbjct: 440 NLCVYVLIARRYSYKNVQRRVAVAD 464


>ref|XP_004147936.1| PREDICTED: putative peptide/nitrate transporter At2g37900-like
           [Cucumis sativus]
          Length = 607

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/85 (69%), Positives = 69/85 (81%)
 Frame = -2

Query: 369 SLGIAFYLSVIGASNFASTLLITTVDHLSSKGGKNSWIGKNLNHSRIDKFYWLLAAINGV 190
           SLGIAFYLSVIGA +F S+ LIT VD ++ + G  SW GKNLN SR+DKFYWLLAA++  
Sbjct: 508 SLGIAFYLSVIGAGSFLSSFLITVVDKITGRSGHTSWFGKNLNTSRLDKFYWLLAAVSAA 567

Query: 189 NLVAYVLIARRYSYKKVQKRVAIAD 115
           NL  YVLIARRYSYK VQ+RVA+AD
Sbjct: 568 NLCVYVLIARRYSYKNVQRRVAVAD 592


>emb|CAN73408.1| hypothetical protein VITISV_024373 [Vitis vinifera]
          Length = 531

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 4/98 (4%)
 Frame = -2

Query: 369 SLGIAFYLSVIGASNFASTLLITTVDHLSSKGGKNSWIGKNLNHSRIDKFYWLLAAINGV 190
           SLGIAFYLSVIGA+NF S+LLIT VDH++ K GK SW G +LN SR+DKFYWLLA +N +
Sbjct: 435 SLGIAFYLSVIGAANFLSSLLITIVDHVTEKHGK-SWFGVDLNTSRLDKFYWLLAIMNML 493

Query: 189 NLVAYVLIARRYSYKKVQKRVAIADSD----DGVEVMA 88
           NL  YV++ARRYSYK VQ+R A+A +D    DGV  MA
Sbjct: 494 NLWVYVIVARRYSYKNVQRRAAVAVADCYNGDGVGSMA 531


>ref|XP_002323528.1| predicted protein [Populus trichocarpa] gi|222868158|gb|EEF05289.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/93 (63%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = -2

Query: 369 SLGIAFYLSVIGASNFASTLLITTVDHLSSKGGKNSWIGKNLNHSRIDKFYWLLAAINGV 190
           SLGIAFYLSVIGA+NF S+LLITT+DH++ + GK SW GK+LN SR+D FYWL+A +   
Sbjct: 493 SLGIAFYLSVIGAANFISSLLITTIDHVTGRFGK-SWFGKDLNSSRLDYFYWLIAGMTAA 551

Query: 189 NLVAYVLIARRYSYKKVQKRVAIAD-SDDGVEV 94
           NL+ YV +ARRYSYK VQ+ V +AD  +DG EV
Sbjct: 552 NLIVYVFLARRYSYKNVQRSVVVADCCEDGFEV 584


>ref|XP_002312125.1| predicted protein [Populus trichocarpa] gi|222851945|gb|EEE89492.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
 Frame = -2

Query: 369 SLGIAFYLSVIGASNFASTLLITTVDHLSSKGGKNSWIGKNLNHSRIDKFYWLLAAINGV 190
           SLG+AF+LSV+GA NF S+ LIT VD ++ K GK  WIGK+LN SR+DKFYWLLAAIN V
Sbjct: 504 SLGMAFFLSVLGAGNFLSSFLITAVDRITEKDGKG-WIGKDLNSSRLDKFYWLLAAINSV 562

Query: 189 NLVAYVLIARRYSYKKVQKRVAIA--DSDDGVEVM 91
           N+  YVL ARRY+YK VQ+R+     + DDG+E+M
Sbjct: 563 NIFVYVLFARRYTYKTVQRRLTATHLNKDDGMELM 597


Top