BLASTX nr result

ID: Coptis25_contig00027958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027958
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272921.1| PREDICTED: uncharacterized protein LOC100245...   116   2e-24
ref|XP_002522521.1| conserved hypothetical protein [Ricinus comm...   111   5e-23
ref|XP_004148782.1| PREDICTED: uncharacterized protein LOC101216...   110   2e-22
ref|NP_567557.1| negative regulator of systemic acquired resista...   109   3e-22
gb|AAM60892.1| unknown [Arabidopsis thaliana]                         109   3e-22

>ref|XP_002272921.1| PREDICTED: uncharacterized protein LOC100245146 [Vitis vinifera]
           gi|297740458|emb|CBI30640.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/77 (67%), Positives = 68/77 (88%)
 Frame = +2

Query: 2   MELDVIKKQADLQGQTSRADGLRTPLLEIILDELTYDEELFSSFLQVFSNPNWKLEVILQ 181
           MELD+ KK+AD+QG T+RADG+RTPL+EII+DELTY+E++ S FLQVF+ P WKLE+ LQ
Sbjct: 289 MELDMSKKKADMQGHTTRADGVRTPLVEIIIDELTYNEDILSPFLQVFNEPKWKLEIALQ 348

Query: 182 FFSKYLKKPSIRTRRSS 232
           +F KY+ KPS+RTRRS+
Sbjct: 349 YFWKYISKPSVRTRRSN 365


>ref|XP_002522521.1| conserved hypothetical protein [Ricinus communis]
           gi|223538212|gb|EEF39821.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 554

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/77 (64%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   MELDVIKKQADLQGQTSRADGLRTPLLEIILDELTYDEELFSSFLQVFSNPNWKLEVILQ 181
           MELDV KK+AD QG T+RADG+R PL+EIILDE+TYD ++ + FLQ+F+ P WK+E+IL 
Sbjct: 283 MELDVSKKKADAQGCTNRADGVRIPLVEIILDEITYDSDMLTQFLQIFNEPKWKMEIILL 342

Query: 182 FFSKYLKKPSIRTRRSS 232
           +FSKY+ KPS RTRRS+
Sbjct: 343 YFSKYIAKPSFRTRRSN 359


>ref|XP_004148782.1| PREDICTED: uncharacterized protein LOC101216512 [Cucumis sativus]
          Length = 470

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/77 (66%), Positives = 63/77 (81%)
 Frame = +2

Query: 2   MELDVIKKQADLQGQTSRADGLRTPLLEIILDELTYDEELFSSFLQVFSNPNWKLEVILQ 181
           MELD  KK AD+QG T+R+DG+RTPL EII DELTYD+ + S FLQVF +  WKLE+I+Q
Sbjct: 284 MELDSSKKNADMQGHTTRSDGVRTPLAEIIQDELTYDKSILSPFLQVFKDSKWKLEIIVQ 343

Query: 182 FFSKYLKKPSIRTRRSS 232
           FF KY+ KPS+RTRRS+
Sbjct: 344 FFWKYISKPSVRTRRSN 360


>ref|NP_567557.1| negative regulator of systemic acquired resistance (SNI1)
           [Arabidopsis thaliana]
           gi|5758933|gb|AAD50900.1|AF169596_1 negative regulator
           of systemic acquired resistance SNI1 [Arabidopsis
           thaliana] gi|115646869|gb|ABJ17147.1| At4g18470
           [Arabidopsis thaliana] gi|332658648|gb|AEE84048.1|
           negative regulator of systemic acquired resistance
           (SNI1) [Arabidopsis thaliana]
          Length = 432

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/77 (64%), Positives = 63/77 (81%)
 Frame = +2

Query: 2   MELDVIKKQADLQGQTSRADGLRTPLLEIILDELTYDEELFSSFLQVFSNPNWKLEVILQ 181
           MELD  KK+ADL+G TSR DG+RTP +EIILDELTYD  L S FLQVF +P WKLE++LQ
Sbjct: 256 MELDTSKKKADLEGITSRGDGVRTPAMEIILDELTYDGYLLSKFLQVFDDPKWKLEIVLQ 315

Query: 182 FFSKYLKKPSIRTRRSS 232
           + +KY+ KP +RTRR++
Sbjct: 316 YLTKYIPKPVVRTRRTT 332


>gb|AAM60892.1| unknown [Arabidopsis thaliana]
          Length = 432

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/77 (64%), Positives = 63/77 (81%)
 Frame = +2

Query: 2   MELDVIKKQADLQGQTSRADGLRTPLLEIILDELTYDEELFSSFLQVFSNPNWKLEVILQ 181
           MELD  KK+ADL+G TSR DG+RTP +EIILDELTYD  L S FLQVF +P WKLE++LQ
Sbjct: 256 MELDTSKKKADLEGITSRGDGVRTPAMEIILDELTYDGYLLSKFLQVFDDPKWKLEIVLQ 315

Query: 182 FFSKYLKKPSIRTRRSS 232
           + +KY+ KP +RTRR++
Sbjct: 316 YLTKYIPKPVVRTRRTT 332


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