BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027885
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37781.1| unknown [Lotus japonicus]                               71   1e-10
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    69   3e-10
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               69   3e-10
gb|ABR18782.1| class S F-box protein [Nicotiana alata]                 69   5e-10
ref|XP_003611124.1| F-box family protein [Medicago truncatula] g...    67   1e-09

>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
 Frame = -1

Query: 359 VVGTVNGLVCFSPYIYAYQPLPYYICNPITRDYL-IPPTSPM-----VDYRPLGNGFGFD 198
           VV + NGL+C       Y    + +CNPIT +++ +P TS +        + +  GFGF 
Sbjct: 177 VVNSCNGLICLCDRERDY----FVVCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQ 232

Query: 197 SLHNEYKVIRILRESCWKTTGDMAAEVFTLGSDSWREITTNVPFINFMEPCNVLVNGCLH 18
             +NEYKV+RILR       G MAAEV TLG+ +WR +  N  +   +      V+G LH
Sbjct: 233 PKNNEYKVVRILR-GLQFYHGIMAAEVHTLGTSTWRNVEVNSMYFYHLR-FPTCVSGALH 290

Query: 17  WV 12
           W+
Sbjct: 291 WI 292


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
 Frame = -1

Query: 359 VVGTVNGLVCFSPYIYAYQPLPYYICNPITRDYLIPP----TSPMVDYRPLGNGFGFDSL 192
           +V + NGL+C S         P  ICNP+TR++ I P    TS   +   +  GFGF   
Sbjct: 261 IVNSCNGLLCLSETSIGS---PLVICNPVTREFTILPELTTTSDWFNSARVQAGFGFQPK 317

Query: 191 HNEYKVI----RILRESCWKTTGDMAAEVFTLGSDSWR--EITTNVPFINFMEPCNVLVN 30
            NEYKVI    + +R         +  E+ TLG+ SWR  E+   + F+  + P    VN
Sbjct: 318 TNEYKVIIMWNKYVRRDNRLVFERVVLEIHTLGTSSWRNVEVDPQISFLKLLNP--TCVN 375

Query: 29  GCLHWVAY 6
           G LHW+ +
Sbjct: 376 GALHWIIF 383


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
 Frame = -1

Query: 374 TRYLEVVGTVNGLVCF--SPYIYAYQPLPYYICNPITRDYLIPP-------TSPMVDYRP 222
           T Y ++VG+ NGL+C   S +  +Y  L  ++ NP  R++   P       TSP++    
Sbjct: 107 TDYYQIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQTLPKYHINNFTSPLM---V 163

Query: 221 LGNGFGFDSLHNEYKVIRILRESCWKTTGDMAAEVFTLGSDSWREITTNVPFINFMEPCN 42
           +G GF F  + N+YKV+RI+     KT+    A+V++L + SWR++  N+          
Sbjct: 164 VGLGFAFHPVINDYKVVRIVYFMRNKTS---EADVYSLRTGSWRKVDANICCYIHSNVSR 220

Query: 41  VLVNGCLHWVA 9
             +NG LHW+A
Sbjct: 221 TFINGALHWLA 231


>gb|ABR18782.1| class S F-box protein [Nicotiana alata]
          Length = 382

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
 Frame = -1

Query: 407 LQLKDVKNFFGTRYLEVVGTVNGLVCFSPYIYAYQPLPYYICNPITRDY-LIPP----TS 243
           +++  + N   + + +++G  NGL+  +        L   + NP TR Y LIPP    T 
Sbjct: 97  VEIPHLTNTNASVFHQLIGPCNGLIALT------DSLTTILFNPTTRIYRLIPPCPFGTP 150

Query: 242 PMVDYRPLGNGFGFDSLHNEYKVIRI---LRESCWKTTGDMAAEVFTLGSDSWREITTNV 72
           P       G GFGFDS+ N+YK +RI    ++ C K   DM  EVF + +D+WRE+    
Sbjct: 151 PGFRRSISGIGFGFDSIANDYKFVRISEVYKDPCEK---DMKVEVFDMCTDTWRELHGQQ 207

Query: 71  PFINFMEPCNVLVNGC-LHWVA 9
             + F  PC+ ++  C  HW A
Sbjct: 208 LPMAFWTPCSEIIYNCAFHWFA 229


>ref|XP_003611124.1| F-box family protein [Medicago truncatula]
           gi|355512459|gb|AES94082.1| F-box family protein
           [Medicago truncatula]
          Length = 551

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
 Frame = -1

Query: 431 ENSATAYHLQLKDVKNFFGTRYLE---------VVGTVNGLVCFSPYIYAYQPLPYYICN 279
           +N A  Y    K +KN    RY+          +V + NGL+C S         P  ICN
Sbjct: 133 KNDAKLY----KVIKNKSKERYITCTSSRDKFGIVNSCNGLLCLSETSIGS---PLVICN 185

Query: 278 PITRDYLIPP----TSPMVDYRPLGNGFGFDSLHNEYKVI----RILRESCWKTTGDMAA 123
           P+TR++ I P    TS   +   +  GF F    NEYKVI    + +R         +  
Sbjct: 186 PVTREFTILPELTTTSDWFNSARVQAGFSFQPKTNEYKVIIIWNKYVRRDNRLVFERVVL 245

Query: 122 EVFTLGSDSWR--EITTNVPFINFMEPCNVLVNGCLHWVAY 6
           E+ TLG+ SWR  E+   + F+  + P    VNG LHW+ +
Sbjct: 246 EIHTLGTPSWRNVEVDPQISFLKLLNP--TCVNGALHWIIF 284