BLASTX nr result

ID: Coptis25_contig00027481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027481
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267331.2| PREDICTED: uncharacterized protein LOC100267...   218   3e-55
emb|CBI37324.3| unnamed protein product [Vitis vinifera]              218   3e-55
gb|AAL73532.1|AF466200_11 hypothetical protein S250_18C08.21 [So...   201   4e-50
ref|XP_002445010.1| hypothetical protein SORBIDRAFT_07g002690 [S...   201   4e-50
ref|XP_002521107.1| catalytic, putative [Ricinus communis] gi|22...   200   1e-49

>ref|XP_002267331.2| PREDICTED: uncharacterized protein LOC100267131 [Vitis vinifera]
          Length = 705

 Score =  218 bits (556), Expect = 3e-55
 Identities = 101/140 (72%), Positives = 115/140 (82%)
 Frame = -2

Query: 420 KEPCVFPFQNFLLHYPGCISVDEDGNRLFLSDSNHHRIIIFDGNGKILDCIGSSPGFEDG 241
           KEP V   QN LL+YPGCISVDE GNRLFLSDSNHHRIIIF GNGKILDCIGS+PGFEDG
Sbjct: 197 KEPYVGSLQNLLLYYPGCISVDESGNRLFLSDSNHHRIIIFSGNGKILDCIGSAPGFEDG 256

Query: 240 EFESAKLLRPAASLYHAFEDCLYFVDSENHAIRRADIGGRTIETIYPPFRTGNNISGIWN 61
           EFESAKL RPAAS YHA EDCLYFVDSENHAIRRAD+G R +ET+YPP  T    +G+W+
Sbjct: 257 EFESAKLARPAASFYHADEDCLYFVDSENHAIRRADMGTRVLETLYPPCNTNKKKNGLWS 316

Query: 60  WVLDKLGIGREVAPKSKELD 1
           W+++KLG+ ++   K  E D
Sbjct: 317 WIVNKLGMEKDADTKPAEFD 336


>emb|CBI37324.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  218 bits (556), Expect = 3e-55
 Identities = 101/140 (72%), Positives = 115/140 (82%)
 Frame = -2

Query: 420 KEPCVFPFQNFLLHYPGCISVDEDGNRLFLSDSNHHRIIIFDGNGKILDCIGSSPGFEDG 241
           KEP V   QN LL+YPGCISVDE GNRLFLSDSNHHRIIIF GNGKILDCIGS+PGFEDG
Sbjct: 66  KEPYVGSLQNLLLYYPGCISVDESGNRLFLSDSNHHRIIIFSGNGKILDCIGSAPGFEDG 125

Query: 240 EFESAKLLRPAASLYHAFEDCLYFVDSENHAIRRADIGGRTIETIYPPFRTGNNISGIWN 61
           EFESAKL RPAAS YHA EDCLYFVDSENHAIRRAD+G R +ET+YPP  T    +G+W+
Sbjct: 126 EFESAKLARPAASFYHADEDCLYFVDSENHAIRRADMGTRVLETLYPPCNTNKKKNGLWS 185

Query: 60  WVLDKLGIGREVAPKSKELD 1
           W+++KLG+ ++   K  E D
Sbjct: 186 WIVNKLGMEKDADTKPAEFD 205


>gb|AAL73532.1|AF466200_11 hypothetical protein S250_18C08.21 [Sorghum bicolor]
          Length = 869

 Score =  201 bits (512), Expect = 4e-50
 Identities = 93/141 (65%), Positives = 114/141 (80%)
 Frame = -2

Query: 423 IKEPCVFPFQNFLLHYPGCISVDEDGNRLFLSDSNHHRIIIFDGNGKILDCIGSSPGFED 244
           +KEP V  F+N LL++P CISVDEDG+R+F+SDSNHHRIII + NG ILD IGSSPGFED
Sbjct: 334 VKEPSVGSFRNLLLYHPACISVDEDGDRIFISDSNHHRIIISNSNGMILDYIGSSPGFED 393

Query: 243 GEFESAKLLRPAASLYHAFEDCLYFVDSENHAIRRADIGGRTIETIYPPFRTGNNISGIW 64
           GEFESAK L PA+S YHA EDCL+ VDSENHA+R+AD G RT+ET+YP F   N  +GIW
Sbjct: 394 GEFESAKFLHPASSFYHAAEDCLFIVDSENHAVRKADFGRRTLETVYPVF---NKSNGIW 450

Query: 63  NWVLDKLGIGREVAPKSKELD 1
           +W+ DKLG+ +EVAP  ++ D
Sbjct: 451 SWITDKLGLRKEVAPTIQDFD 471


>ref|XP_002445010.1| hypothetical protein SORBIDRAFT_07g002690 [Sorghum bicolor]
           gi|241941360|gb|EES14505.1| hypothetical protein
           SORBIDRAFT_07g002690 [Sorghum bicolor]
          Length = 870

 Score =  201 bits (512), Expect = 4e-50
 Identities = 93/141 (65%), Positives = 114/141 (80%)
 Frame = -2

Query: 423 IKEPCVFPFQNFLLHYPGCISVDEDGNRLFLSDSNHHRIIIFDGNGKILDCIGSSPGFED 244
           +KEP V  F+N LL++P CISVDEDG+R+F+SDSNHHRIII + NG ILD IGSSPGFED
Sbjct: 334 VKEPSVGSFRNLLLYHPACISVDEDGDRIFISDSNHHRIIISNSNGMILDYIGSSPGFED 393

Query: 243 GEFESAKLLRPAASLYHAFEDCLYFVDSENHAIRRADIGGRTIETIYPPFRTGNNISGIW 64
           GEFESAK L PA+S YHA EDCL+ VDSENHA+R+AD G RT+ET+YP F   N  +GIW
Sbjct: 394 GEFESAKFLHPASSFYHAAEDCLFIVDSENHAVRKADFGRRTLETVYPVF---NKSNGIW 450

Query: 63  NWVLDKLGIGREVAPKSKELD 1
           +W+ DKLG+ +EVAP  ++ D
Sbjct: 451 SWITDKLGLRKEVAPTIQDFD 471


>ref|XP_002521107.1| catalytic, putative [Ricinus communis] gi|223539676|gb|EEF41258.1|
           catalytic, putative [Ricinus communis]
          Length = 767

 Score =  200 bits (508), Expect = 1e-49
 Identities = 94/141 (66%), Positives = 109/141 (77%), Gaps = 1/141 (0%)
 Frame = -2

Query: 420 KEPCVFPF-QNFLLHYPGCISVDEDGNRLFLSDSNHHRIIIFDGNGKILDCIGSSPGFED 244
           KEPC   F QN +L++PGC+S DE G+RLFLSDSNHHRIIIFDGNGKI+D IGS PGFED
Sbjct: 257 KEPCSSSFLQNLVLYFPGCVSADESGDRLFLSDSNHHRIIIFDGNGKIMDSIGSCPGFED 316

Query: 243 GEFESAKLLRPAASLYHAFEDCLYFVDSENHAIRRADIGGRTIETIYPPFRTGNNISGIW 64
           GEFESAKLLRPAAS YH  EDCLY VD+EN AIRRAD+  R +ET+YP      N S +W
Sbjct: 317 GEFESAKLLRPAASFYHNSEDCLYIVDAENQAIRRADMERRVLETLYPTCSISKNNSSVW 376

Query: 63  NWVLDKLGIGREVAPKSKELD 1
            W+++K+G GR    KSKE D
Sbjct: 377 TWIVNKMGFGRNSDMKSKEFD 397


Top