BLASTX nr result

ID: Coptis25_contig00026483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026483
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517183.1| conserved hypothetical protein [Ricinus comm...    79   1e-18
emb|CBI32367.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_002272356.1| PREDICTED: uncharacterized protein LOC100249...    89   1e-15
ref|XP_003541625.1| PREDICTED: uncharacterized protein LOC100806...    88   2e-15
emb|CAN62851.1| hypothetical protein VITISV_010155 [Vitis vinifera]    87   6e-15

>ref|XP_002517183.1| conserved hypothetical protein [Ricinus communis]
           gi|223543818|gb|EEF45346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score = 79.3 bits (194), Expect(2) = 1e-18
 Identities = 50/129 (38%), Positives = 69/129 (53%)
 Frame = +2

Query: 473 ESLQRSNETLGDWIRREVNTSKTQVFYRTYSPVHFRTI**VPMI**YALEVVIGILEGPV 652
           ++ +RS ET   WI  +VNTSKTQVF+RT++PVHFR             +   G      
Sbjct: 296 QAYKRSIETAVQWINDKVNTSKTQVFFRTFAPVHFR-----------GGDWRTGGSCHLE 344

Query: 653 TWRHCQRKSVPSGTWMHRKLVSDSLSEHLSKIHMTEMDVLNVTEMTMWRKDGCASLYYQG 832
           T       SVPS TW   ++V+D LS +  +    ++DVLN+T MT  RKD  +S+YY  
Sbjct: 345 TLPELGSSSVPSETWTQYQIVTDVLSAYSKEKQEMKLDVLNITSMTARRKDAHSSVYYLH 404

Query: 833 PKIGPVPLH 859
               P P+H
Sbjct: 405 SH--PAPMH 411



 Score = 40.4 bits (93), Expect(2) = 1e-18
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = +3

Query: 417 RRGSYFQEGAEVKMEMSVERAYR 485
           R G+YFQEGA+VKMEM+VE+AY+
Sbjct: 277 RGGTYFQEGADVKMEMNVEQAYK 299


>emb|CBI32367.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
 Frame = +2

Query: 380 WWSVGSLFCRKVKKGFLFPRRGRSEDGNECRESLQRSNETLGDWIRREVNTSKTQVFYRT 559
           WW+    + + ++ G  F  + + +      ++ +RS +TL DW+   VN S+TQVF+RT
Sbjct: 222 WWN----YEKTIRGGCYFQEKQKVKMEMSVDDAYKRSLKTLLDWVTSHVNMSETQVFFRT 277

Query: 560 YSPVHFRTI**VPMI**YALEVVIGILEGPVTWRHCQRKSVPSGTWMHRK----LVSDSL 727
           Y+PVHFR             +   G      T        VP  TW        ++SD  
Sbjct: 278 YAPVHFR-----------GGDWKSGGSCHLETLPDMSSSPVPPETWPQLDNAFDVLSDHS 326

Query: 728 SEHLSKIHMTEMDVLNVTEMTMWRKDGCASLYYQGPKIGPVPLH 859
           ++H +   + ++D+LNVT MT  RKDG +S+YY GP +GP PLH
Sbjct: 327 NQHSNNSQVMKLDLLNVTLMTSLRKDGHSSVYYLGPGLGPAPLH 370


>ref|XP_002272356.1| PREDICTED: uncharacterized protein LOC100249456 [Vitis vinifera]
          Length = 460

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
 Frame = +2

Query: 380 WWSVGSLFCRKVKKGFLFPRRGRSEDGNECRESLQRSNETLGDWIRREVNTSKTQVFYRT 559
           WW+    + + ++ G  F  + + +      ++ +RS +TL DW+   VN S+TQVF+RT
Sbjct: 263 WWN----YEKTIRGGCYFQEKQKVKMEMSVDDAYKRSLKTLLDWVTSHVNMSETQVFFRT 318

Query: 560 YSPVHFRTI**VPMI**YALEVVIGILEGPVTWRHCQRKSVPSGTWMHRK----LVSDSL 727
           Y+PVHFR             +   G      T        VP  TW        ++SD  
Sbjct: 319 YAPVHFR-----------GGDWKSGGSCHLETLPDMSSSPVPPETWPQLDNAFDVLSDHS 367

Query: 728 SEHLSKIHMTEMDVLNVTEMTMWRKDGCASLYYQGPKIGPVPLH 859
           ++H +   + ++D+LNVT MT  RKDG +S+YY GP +GP PLH
Sbjct: 368 NQHSNNSQVMKLDLLNVTLMTSLRKDGHSSVYYLGPGLGPAPLH 411


>ref|XP_003541625.1| PREDICTED: uncharacterized protein LOC100806510 [Glycine max]
          Length = 439

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
 Frame = +2

Query: 380 WWSVGSLFCRKVKKGFLFPRRGRSEDGNECRESLQRSNETLGDWIRREVNTSKTQVFYRT 559
           WW+    + + ++ G  F      +   +  E+ +RS +T+ +WI+  VN  KTQVF+RT
Sbjct: 261 WWN----YEKTIRGGCYFQEGVEIKLEMKVEEAYKRSIKTVLNWIQSSVNPKKTQVFFRT 316

Query: 560 YSPVHFRTI**VPMI**YALEVVIGILEGPVTWR---HCQRKS--------VPSGTWMHR 706
           Y+PVHFR                         WR   +C  ++        VP+  W   
Sbjct: 317 YAPVHFRG----------------------GDWRKGGNCNLETLPELGSSLVPNDNWSQF 354

Query: 707 KLVSDSLSEHLSKIHMTEMDVLNVTEMTMWRKDGCASLYYQGPKIGPVPLH 859
           K+ +  LS H +   + ++ +LNVT+MT  RKDG  S+YY GP  GP P H
Sbjct: 355 KIANSVLSAHTNTSEVLKLKILNVTQMTAQRKDGHPSIYYLGPNAGPAPPH 405


>emb|CAN62851.1| hypothetical protein VITISV_010155 [Vitis vinifera]
          Length = 463

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
 Frame = +2

Query: 380 WWSVGSLFCRKVKKGFLFPRRGRSEDGNECRESLQRSNETLGDWIRREVNTSKTQVFYRT 559
           WW+    + + ++ G  F  + + +      ++ +RS +TL DW+   VN S+TQVF+RT
Sbjct: 266 WWN----YEKTIRGGCYFQEKQKVKMEMSVDDAYKRSLKTLLDWVTSHVNMSETQVFFRT 321

Query: 560 YSPVHFRTI**VPMI**YALEVVIGILEGPVTWRHCQRKSVPSGTWMHRK----LVSDSL 727
           Y+PVHFR             +   G      T        VP  TW        ++SD  
Sbjct: 322 YAPVHFR-----------GGDWKSGGSCHLETLPDMSSSPVPPETWPQLXNAFDVLSDHS 370

Query: 728 SEHLSKIHMTEMDVLNVTEMTMWRKDGCASLYYQGPKIGPVPLH 859
           ++H +   + ++D+LNVT MT  RKDG +S+YY GP +GP  LH
Sbjct: 371 NZHSNNSQVMKLDLLNVTLMTSLRKDGHSSVYYLGPGLGPAXLH 414


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