BLASTX nr result
ID: Coptis25_contig00025937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00025937
(457 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera] 110 2e-33
gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica] 110 3e-33
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256... 102 2e-32
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] 102 2e-32
emb|CAN60474.1| hypothetical protein VITISV_028414 [Vitis vinifera] 108 3e-32
>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
Length = 1201
Score = 110 bits (276), Expect(3) = 2e-33
Identities = 53/93 (56%), Positives = 65/93 (69%)
Frame = -2
Query: 384 LIAEEQGSFVSGHQILDAVLVANEAIEDRNVSGILGLVCKIDLTKAYDHMSWEFLDYVMR 205
L++ Q +FV G QILDAVLVANEAI+ R S GLVCK+D+ KAYDH++W FL V+
Sbjct: 523 LVSNSQNAFVEGRQILDAVLVANEAIDSRKRSVGTGLVCKLDIEKAYDHVNWRFLMSVLE 582
Query: 204 RMGFGWKWRKWIRRCISLCSFLILINGVACWFF 106
+MGFG KWRKWI CIS +L+NG FF
Sbjct: 583 KMGFGPKWRKWIFCCISTVRMAVLVNGTPTDFF 615
Score = 40.8 bits (94), Expect(3) = 2e-33
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -1
Query: 109 FFRSSRGIR*GNPLSPPLFLLAVEVLGRMISKANE 5
FF + RG+R G+PLSP LF+L +E L +IS+A E
Sbjct: 614 FFSTFRGLRQGDPLSPYLFVLIMEALSSLISRAEE 648
Score = 36.2 bits (82), Expect(3) = 2e-33
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = -3
Query: 455 ISLVGSVYKIISKMLSMRLKAVISSLRRN 369
ISLVGS+YKII+K+L+ RLK V+ L N
Sbjct: 498 ISLVGSLYKIIAKVLANRLKGVMGKLVSN 526
>gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]
Length = 168
Score = 110 bits (275), Expect(3) = 3e-33
Identities = 47/95 (49%), Positives = 69/95 (72%)
Frame = -2
Query: 390 DFLIAEEQGSFVSGHQILDAVLVANEAIEDRNVSGILGLVCKIDLTKAYDHMSWEFLDYV 211
D +I+E Q SFV G QILD+VL+ANE ++ R SGI GL+CK+D+ KAYDH++W+ L ++
Sbjct: 27 DSVISESQNSFVGGRQILDSVLIANECLDSRIKSGIPGLICKLDIEKAYDHVNWDCLFFI 86
Query: 210 MRRMGFGWKWRKWIRRCISLCSFLILINGVACWFF 106
+ RMGFG KW W++ C+S + +++NG FF
Sbjct: 87 LDRMGFGRKWVCWMKACVSTVRYSVIVNGSPTGFF 121
Score = 42.0 bits (97), Expect(3) = 3e-33
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1
Query: 109 FFRSSRGIR*GNPLSPPLFLLAVEVLGRMISKANE 5
FF SSRG+R G+PLSP LFL+ +EVL M+ + E
Sbjct: 120 FFDSSRGLRQGDPLSPLLFLVIMEVLNPMLRRTEE 154
Score = 34.7 bits (78), Expect(3) = 3e-33
Identities = 14/26 (53%), Positives = 23/26 (88%)
Frame = -3
Query: 455 ISLVGSVYKIISKMLSMRLKAVISSL 378
ISL+GS+YK+++K+L+ RLK V+ S+
Sbjct: 4 ISLIGSIYKLLAKVLANRLKLVLDSV 29
>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
Length = 2667
Score = 102 bits (255), Expect(3) = 2e-32
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = -2
Query: 384 LIAEEQGSFVSGHQILDAVLVANEAIEDRNVSGILGLVCKIDLTKAYDHMSWEFLDYVMR 205
+I++ Q +FV G QILDAVL+ANEA++ R I GL+ K+D+ KA+DH++W FL VM
Sbjct: 542 VISDSQHAFVHGRQILDAVLIANEALDSRLKDNIPGLLLKMDIEKAFDHVNWNFLMEVMS 601
Query: 204 RMGFGWKWRKWIRRCISLCSFLILINGVACWFF 106
+MGFG +W WI+ C S SF ILING FF
Sbjct: 602 KMGFGHRWINWIKWCCSTTSFSILINGSPSGFF 634
Score = 47.8 bits (112), Expect(3) = 2e-32
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = -1
Query: 109 FFRSSRGIR*GNPLSPPLFLLAVEVLGRMISKA 11
FFRSSRG+R G+PLSP LFLLA+E L +++S+A
Sbjct: 633 FFRSSRGLRQGDPLSPYLFLLAMEALSQLLSRA 665
Score = 33.9 bits (76), Expect(3) = 2e-32
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 455 ISLVGSVYKIISKMLSMRLKAVISSL 378
ISLVGSVYK+++K+L+ RLK V+ +
Sbjct: 517 ISLVGSVYKLLAKVLANRLKTVMGEV 542
>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
Length = 1728
Score = 102 bits (255), Expect(3) = 2e-32
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = -2
Query: 384 LIAEEQGSFVSGHQILDAVLVANEAIEDRNVSGILGLVCKIDLTKAYDHMSWEFLDYVMR 205
+I++ Q +FV G QILDAVL+ANEA++ R I GL+ K+D+ KA+DH++W FL VM
Sbjct: 623 VISDSQHAFVHGRQILDAVLIANEALDSRLKDNIPGLLLKMDIEKAFDHVNWNFLMEVMS 682
Query: 204 RMGFGWKWRKWIRRCISLCSFLILINGVACWFF 106
+MGFG +W WI+ C S SF ILING FF
Sbjct: 683 KMGFGHRWINWIKWCCSTTSFSILINGSPSGFF 715
Score = 47.8 bits (112), Expect(3) = 2e-32
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = -1
Query: 109 FFRSSRGIR*GNPLSPPLFLLAVEVLGRMISKA 11
FFRSSRG+R G+PLSP LFLLA+E L +++S+A
Sbjct: 714 FFRSSRGLRQGDPLSPYLFLLAMEALSQLLSRA 746
Score = 33.9 bits (76), Expect(3) = 2e-32
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -3
Query: 455 ISLVGSVYKIISKMLSMRLKAVISSL 378
ISLVGSVYK+++K+L+ RLK V+ +
Sbjct: 598 ISLVGSVYKLLAKVLANRLKTVMGEV 623
>emb|CAN60474.1| hypothetical protein VITISV_028414 [Vitis vinifera]
Length = 757
Score = 108 bits (271), Expect(3) = 3e-32
Identities = 49/93 (52%), Positives = 67/93 (72%)
Frame = -2
Query: 384 LIAEEQGSFVSGHQILDAVLVANEAIEDRNVSGILGLVCKIDLTKAYDHMSWEFLDYVMR 205
+I+E Q +FV G QILDAVL+ANEA++ R + G++CK+D+ KAYDH+SW FL V++
Sbjct: 293 VISESQNAFVEGRQILDAVLIANEAVDSRLKDNVGGVLCKLDIEKAYDHVSWSFLLAVLK 352
Query: 204 RMGFGWKWRKWIRRCISLCSFLILINGVACWFF 106
+MGFG +W KWI CI+ F +LING FF
Sbjct: 353 KMGFGERWIKWIDWCIATVKFSVLINGSLSGFF 385
Score = 44.3 bits (103), Expect(3) = 3e-32
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1
Query: 124 GRLLVFFRSSRGIR*GNPLSPPLFLLAVEVLGRMISKA 11
G L FF+SSRG+R G+PLSP LF++A+EV M+ +A
Sbjct: 379 GSLSGFFQSSRGLRQGDPLSPYLFVIAMEVFSSMLRRA 416
Score = 30.4 bits (67), Expect(3) = 3e-32
Identities = 12/26 (46%), Positives = 22/26 (84%)
Frame = -3
Query: 455 ISLVGSVYKIISKMLSMRLKAVISSL 378
ISLVG++YK+++K+L+ R+K V+ +
Sbjct: 268 ISLVGNLYKLLAKVLANRIKKVMGKV 293