BLASTX nr result

ID: Coptis25_contig00024471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024471
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-42
ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266...   177   5e-42
ref|XP_002315934.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-41
ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256...   174   4e-41
emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]   173   1e-40

>ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|222851285|gb|EEE88832.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  180 bits (456), Expect = 1e-42
 Identities = 119/268 (44%), Positives = 144/268 (53%), Gaps = 14/268 (5%)
 Frame = -1

Query: 1353 MAIDLWSNMENSSLGISPRISFSHDICQA-EVVTIERH---RSDSLLLESNDFDFCISES 1186
            MAID+ S  E SS GISPRISFSHD+ Q  + V+IE H   R DS LL+S DFDFC   S
Sbjct: 1    MAIDVCS--EISSAGISPRISFSHDLNQTTDAVSIEDHYHRRLDSSLLDS-DFDFCFGNS 57

Query: 1185 FEQDSSCAEELFSDGKILPLEIKKQVLPPKPPTH---------PTSNENSKKESLKEIME 1033
            F Q+ S A+ELFS+GKILP+EIKK ++  K               S+E ++K+ LKE + 
Sbjct: 58   FVQELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLISQPQQNSSETTEKKQLKEFLS 117

Query: 1032 QXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSSS 853
                                       C +   + LI SL  LSRSNSTGSAP P +   
Sbjct: 118  MSLDADEKPASKSFWQFKRSNSLN---CDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQGM 174

Query: 852  L-KDNHNKHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXQKKNYGSYNNGVRISPLLNVP 676
            L K+     L K  S                          +  GSY NGVRISP+LN+P
Sbjct: 175  LSKETQKPQLQKQASVPSRKSSVPSSAAFYSYNSQQKPPLLRKCGSYGNGVRISPVLNIP 234

Query: 675  PPYISKGTVNLFGLGSLFCNGKEKNKKK 592
            PPYIS+GTVNLFGLGSLFCNGK K KK+
Sbjct: 235  PPYISRGTVNLFGLGSLFCNGKVKKKKR 262


>ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266297 [Vitis vinifera]
          Length = 252

 Score =  177 bits (450), Expect = 5e-42
 Identities = 112/249 (44%), Positives = 140/249 (56%), Gaps = 11/249 (4%)
 Frame = -1

Query: 1305 SPRISFSHDICQAEVVTIERHRSD----SLLLESNDFDFCISESFEQDSSCAEELFSDGK 1138
            SPRISFS+D CQA+V +I+  +S     S L  S DFDFC+S SFE +SS A+ELFS+G 
Sbjct: 10   SPRISFSNDFCQADVASIDHCKSRNSELSSLDSSPDFDFCVSTSFEHESSSADELFSNGI 69

Query: 1137 ILPLEIKKQVLPPK------PPTHPTSNENSKKESLKEIMEQXXXXXXXXXXXXXXXXXX 976
            ILP++I+++ + P+      P   P++NE+ KKES K I                     
Sbjct: 70   ILPIKIQERTVAPRSVASLPPLPSPSTNESLKKESSKGIAVSSCESQEKLQSSKSFWPFK 129

Query: 975  XXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSSSLKDNHNKHLPKTPSSNGXX 796
                    C N ++RSL+CSLPLLSRSNSTGS    KR+S         + K+ SS+   
Sbjct: 130  RSSSLN--CDNVHRRSLMCSLPLLSRSNSTGSVQNSKRTSKQNSQKQPSMAKSSSSSSSA 187

Query: 795  XXXXXXXXXXXXXXXXXXXQKKNYG-SYNNGVRISPLLNVPPPYISKGTVNLFGLGSLFC 619
                                KKNYG SY NGV ISP++NV P YISKGT NLFGLGSLF 
Sbjct: 188  SSTNFYTYPVPQKPPL----KKNYGGSYGNGVWISPVINVSPAYISKGTANLFGLGSLFR 243

Query: 618  NGKEKNKKK 592
            NGKEK  KK
Sbjct: 244  NGKEKKSKK 252


>ref|XP_002315934.1| predicted protein [Populus trichocarpa] gi|222864974|gb|EEF02105.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  175 bits (444), Expect = 3e-41
 Identities = 118/269 (43%), Positives = 143/269 (53%), Gaps = 16/269 (5%)
 Frame = -1

Query: 1353 MAIDLWSNMENSSLGISPRISFSHDICQA-EVVTIERH---RSDSLLLESNDFDFCISES 1186
            MAID+ S  E SS GISPRISFSHD+ Q  + V+IE H   R DS LL+S DFDFCI  S
Sbjct: 1    MAIDVCS--EISSAGISPRISFSHDLNQTTDAVSIEDHHHRRLDSSLLDS-DFDFCIGNS 57

Query: 1185 FEQDSSCAEELFSDGKILPLEIKKQVLPPK-----------PPTHPTSNENSKKESLKEI 1039
            F Q+ S A+ELFS+GKILP+EIKK  +  K            P H TS   ++K+ LKE 
Sbjct: 58   FVQELSSADELFSNGKILPVEIKKHSISSKGNNHQPKSLTSQPQHQTSTGTTEKKQLKEF 117

Query: 1038 MEQXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRS 859
            + +                          C +   + LI SL  LSRSNSTGSAP P + 
Sbjct: 118  LSESLDADEKPASKSFWQFKRSSSLN---CDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQ 174

Query: 858  SSL-KDNHNKHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXQKKNYGSYNNGVRISPLLN 682
            + L K+     L K  S                          +  GS+ NG RISP+LN
Sbjct: 175  AMLSKETQKPKLQKQASVPSRKPSVPSSAAFYSYNPQQKPPLLRKCGSHGNGFRISPVLN 234

Query: 681  VPPPYISKGTVNLFGLGSLFCNGKEKNKK 595
            +PPPYIS+G VN FGLGSLFCNGK K KK
Sbjct: 235  IPPPYISRGAVNPFGLGSLFCNGKVKRKK 263


>ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256597 [Vitis vinifera]
          Length = 250

 Score =  174 bits (442), Expect = 4e-41
 Identities = 122/270 (45%), Positives = 151/270 (55%), Gaps = 16/270 (5%)
 Frame = -1

Query: 1353 MAIDLWSNMENSSLGISPRISFSHDICQAEVVTIERHRSDSLLLESNDFDFCISESFEQD 1174
            MAI+L S  ++ S+ +SPRISFSHD+CQA+VV +E   S S    +NDFDFC+ ESF QD
Sbjct: 1    MAIELCS--DSCSMCMSPRISFSHDLCQADVVPVEHDPSQSNS-PTNDFDFCVYESFYQD 57

Query: 1173 SSCAEELFSDGKILPLEIKKQVLPPK-------------PPTHPTSNENSKKESLKEIME 1033
            +S A+ELF DGKILP++IKK++  PK             PP  PT N N KKES +EI  
Sbjct: 58   TSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPLPTQN-NRKKESSREIKR 116

Query: 1032 QXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSS- 856
                                       C +GY RSL C LPLLSRSNSTGS    KRS+ 
Sbjct: 117  TINEVYEKQNSKSFWRFKRSTSLN---CSSGYARSL-CPLPLLSRSNSTGSVSNAKRSAL 172

Query: 855  SLKDNHN-KHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXQKKNYGSYNNGVRISPLLNV 679
            S KD +N K+  K PS                         KK YGS++NGVRI+P+LNV
Sbjct: 173  SSKDGNNIKNWHKHPS-----VAPIKSPHSSSSTSYQKPPLKKTYGSHSNGVRINPVLNV 227

Query: 678  PPPYISKGTVNLFGLGSLFCNGKEK-NKKK 592
            P P       +LFGLGS+F NGK+K NK+K
Sbjct: 228  PTP-------SLFGLGSIFSNGKDKINKRK 250


>emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]
          Length = 250

 Score =  173 bits (439), Expect = 1e-40
 Identities = 122/270 (45%), Positives = 150/270 (55%), Gaps = 16/270 (5%)
 Frame = -1

Query: 1353 MAIDLWSNMENSSLGISPRISFSHDICQAEVVTIERHRSDSLLLESNDFDFCISESFEQD 1174
            MAI+L S  ++ S+ +SPRISFSHD+CQA+VV +E   S S    +NDFDFC+ ESF QD
Sbjct: 1    MAIELCS--DSCSMCMSPRISFSHDLCQADVVPVEHXPSQSNS-PTNDFDFCVYESFYQD 57

Query: 1173 SSCAEELFSDGKILPLEIKKQVLPPK-------------PPTHPTSNENSKKESLKEIME 1033
            +S A+ELF DGKILP++IKK++  PK             PP  PT N N KKES +EI  
Sbjct: 58   TSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPLPTQN-NRKKESSREIKR 116

Query: 1032 QXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSS- 856
                                       C +GY RSL C LPLLSRSNSTGS    KRS+ 
Sbjct: 117  TINEVYEKQNSKSFWRFKRSTSLN---CSSGYARSL-CPLPLLSRSNSTGSVSNAKRSAL 172

Query: 855  SLKDNHN-KHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXQKKNYGSYNNGVRISPLLNV 679
            S KD +N K+  K PS                         KK YGS++NGVRI+P+LNV
Sbjct: 173  SSKDGNNIKNWHKHPS-----VAPIKSPHSSSSTSYQKPPLKKTYGSHSNGVRINPVLNV 227

Query: 678  PPPYISKGTVNLFGLGSLFCNGKEK-NKKK 592
            P P       +LFGLGS+F NGK+K NK K
Sbjct: 228  PTP-------SLFGLGSIFSNGKDKINKXK 250


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