BLASTX nr result

ID: Coptis25_contig00024237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024237
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [...   104   4e-29
emb|CBI23671.3| unnamed protein product [Vitis vinifera]              104   4e-29
emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]   102   3e-28
ref|XP_003535429.1| PREDICTED: kinesin-like protein KIF11-like [...   101   7e-26
ref|XP_003555514.1| PREDICTED: kinesin-like protein KIF11-like [...   100   4e-24

>ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [Vitis vinifera]
          Length = 929

 Score =  104 bits (260), Expect(2) = 4e-29
 Identities = 47/69 (68%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 RICDYPDQKEKPISALNISSDRCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSR 29
           RI DYPD+K+KP+S L+I+ DR ++RVRT+IGYRDFSLDGVS+S +ED+D FY+KF++SR
Sbjct: 59  RIRDYPDRKDKPLSILHINPDRQTVRVRTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESR 118

Query: 28  ISGVKLGEK 2
           I+GVK+GEK
Sbjct: 119 INGVKMGEK 127



 Score = 48.9 bits (115), Expect(2) = 4e-29
 Identities = 23/36 (63%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = -1

Query: 312 RTPQSKHRLHFNSAKGTHPSPNP--ALKETALTEHP 211
           +TP SKHRLHFN  K T PSPNP    KET   EHP
Sbjct: 18  KTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHP 53


>emb|CBI23671.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  104 bits (260), Expect(2) = 4e-29
 Identities = 47/69 (68%), Positives = 63/69 (91%)
 Frame = -3

Query: 208 RICDYPDQKEKPISALNISSDRCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSR 29
           RI DYPD+K+KP+S L+I+ DR ++RVRT+IGYRDFSLDGVS+S +ED+D FY+KF++SR
Sbjct: 59  RIRDYPDRKDKPLSILHINPDRQTVRVRTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESR 118

Query: 28  ISGVKLGEK 2
           I+GVK+GEK
Sbjct: 119 INGVKMGEK 127



 Score = 48.9 bits (115), Expect(2) = 4e-29
 Identities = 23/36 (63%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = -1

Query: 312 RTPQSKHRLHFNSAKGTHPSPNP--ALKETALTEHP 211
           +TP SKHRLHFN  K T PSPNP    KET   EHP
Sbjct: 18  KTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHP 53


>emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]
          Length = 980

 Score =  102 bits (253), Expect(2) = 3e-28
 Identities = 46/69 (66%), Positives = 62/69 (89%)
 Frame = -3

Query: 208 RICDYPDQKEKPISALNISSDRCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSR 29
           RI DYPD+K+KP+S L+I+ DR ++RV T+IGYRDFSLDGVS+S +ED+D FY+KF++SR
Sbjct: 59  RIRDYPDRKDKPLSILHINPDRQTVRVLTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESR 118

Query: 28  ISGVKLGEK 2
           I+GVK+GEK
Sbjct: 119 INGVKMGEK 127



 Score = 48.9 bits (115), Expect(2) = 3e-28
 Identities = 23/36 (63%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = -1

Query: 312 RTPQSKHRLHFNSAKGTHPSPNP--ALKETALTEHP 211
           +TP SKHRLHFN  K T PSPNP    KET   EHP
Sbjct: 18  KTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHP 53


>ref|XP_003535429.1| PREDICTED: kinesin-like protein KIF11-like [Glycine max]
          Length = 756

 Score =  101 bits (252), Expect(2) = 7e-26
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = -3

Query: 208 RICDYPDQKEKPISALNISSDRCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSR 29
           RI DYPD+K+KP+S L  SS+  SIRVR + GYRDF+LDGVSVS +EDLD+FY+KF++SR
Sbjct: 60  RIRDYPDRKDKPLSVLQTSSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESR 119

Query: 28  ISGVKLGEK 2
           I GVKLG+K
Sbjct: 120 IHGVKLGDK 128



 Score = 41.2 bits (95), Expect(2) = 7e-26
 Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 6/40 (15%)
 Frame = -1

Query: 312 RTPQSKHRLHFN---SAKGTHPSPNP---ALKETALTEHP 211
           +TPQSKHRL+FN   SA  THPSPNP   A KE    EHP
Sbjct: 16  KTPQSKHRLNFNALKSAPQTHPSPNPNSVANKEPP-PEHP 54


>ref|XP_003555514.1| PREDICTED: kinesin-like protein KIF11-like [Glycine max]
          Length = 758

 Score =  100 bits (249), Expect(2) = 4e-24
 Identities = 46/69 (66%), Positives = 59/69 (85%)
 Frame = -3

Query: 208 RICDYPDQKEKPISALNISSDRCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSR 29
           RI DYPD+K+KP+S L  +S+  SIRVR + GYRDF+LDGVSVS +EDLD+FY+KF++SR
Sbjct: 56  RIRDYPDRKDKPLSVLQTNSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESR 115

Query: 28  ISGVKLGEK 2
           I GVKLG+K
Sbjct: 116 IHGVKLGDK 124



 Score = 36.6 bits (83), Expect(2) = 4e-24
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 312 RTPQSKHRLHFNSAKGT-HPSPNPALKETALTEHP 211
           +TPQSKHRL+FN  K    P+PN    +    EHP
Sbjct: 16  KTPQSKHRLNFNGLKSAPSPNPNSVANKEPPPEHP 50


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