BLASTX nr result

ID: Coptis25_contig00022908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022908
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH01342.1| WRKY4 transcription factor, partial [Gossypium hi...    54   9e-12
emb|CAN78720.1| hypothetical protein VITISV_035804 [Vitis vinifera]    56   1e-11
ref|XP_002279019.2| PREDICTED: probable WRKY transcription facto...    56   1e-11
emb|CBI26664.3| unnamed protein product [Vitis vinifera]               56   1e-11
ref|XP_003566323.1| PREDICTED: WRKY transcription factor 6-like ...    56   2e-11

>gb|AFH01342.1| WRKY4 transcription factor, partial [Gossypium hirsutum]
          Length = 252

 Score = 54.3 bits (129), Expect(2) = 9e-12
 Identities = 26/40 (65%), Positives = 27/40 (67%)
 Frame = -2

Query: 322 LIDGCQWTKYG*KMAKGNSCP*AYSWATMATKYLVHKQVQ 203
           + DGCQW KYG KMAKGN CP AY   TMA    V KQVQ
Sbjct: 31  ITDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQ 70



 Score = 41.2 bits (95), Expect(2) = 9e-12
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = -1

Query: 140 DDCTRLIATYESNHNHLLTPAAMSMTLISSIICFLLL 30
           DD T LI TYE NHNH L PAAM+M   ++    +LL
Sbjct: 74  DDRTILITTYEGNHNHPLPPAAMAMASTTAAAASMLL 110


>emb|CAN78720.1| hypothetical protein VITISV_035804 [Vitis vinifera]
          Length = 551

 Score = 56.2 bits (134), Expect(2) = 1e-11
 Identities = 27/38 (71%), Positives = 27/38 (71%)
 Frame = -2

Query: 316 DGCQWTKYG*KMAKGNSCP*AYSWATMATKYLVHKQVQ 203
           DGCQW KYG KMAKGN CP AY   TMAT   V KQVQ
Sbjct: 300 DGCQWRKYGQKMAKGNPCPRAYYRCTMATACPVRKQVQ 337



 Score = 38.9 bits (89), Expect(2) = 1e-11
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -1

Query: 140 DDCTRLIATYESNHNHLLTPAAMSMTLISSIICFLLL 30
           +D T LI TYE +HNH L PAAM+M   +S    +LL
Sbjct: 341 EDRTVLITTYEGHHNHPLPPAAMAMASTTSAAATMLL 377


>ref|XP_002279019.2| PREDICTED: probable WRKY transcription factor 42-like [Vitis
           vinifera]
          Length = 511

 Score = 56.2 bits (134), Expect(2) = 1e-11
 Identities = 27/38 (71%), Positives = 27/38 (71%)
 Frame = -2

Query: 316 DGCQWTKYG*KMAKGNSCP*AYSWATMATKYLVHKQVQ 203
           DGCQW KYG KMAKGN CP AY   TMAT   V KQVQ
Sbjct: 260 DGCQWRKYGQKMAKGNPCPRAYYRCTMATACPVRKQVQ 297



 Score = 38.9 bits (89), Expect(2) = 1e-11
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -1

Query: 140 DDCTRLIATYESNHNHLLTPAAMSMTLISSIICFLLL 30
           +D T LI TYE +HNH L PAAM+M   +S    +LL
Sbjct: 301 EDRTVLITTYEGHHNHPLPPAAMAMASTTSAAATMLL 337


>emb|CBI26664.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 56.2 bits (134), Expect(2) = 1e-11
 Identities = 27/38 (71%), Positives = 27/38 (71%)
 Frame = -2

Query: 316 DGCQWTKYG*KMAKGNSCP*AYSWATMATKYLVHKQVQ 203
           DGCQW KYG KMAKGN CP AY   TMAT   V KQVQ
Sbjct: 245 DGCQWRKYGQKMAKGNPCPRAYYRCTMATACPVRKQVQ 282



 Score = 38.9 bits (89), Expect(2) = 1e-11
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -1

Query: 140 DDCTRLIATYESNHNHLLTPAAMSMTLISSIICFLLL 30
           +D T LI TYE +HNH L PAAM+M   +S    +LL
Sbjct: 286 EDRTVLITTYEGHHNHPLPPAAMAMASTTSAAATMLL 322


>ref|XP_003566323.1| PREDICTED: WRKY transcription factor 6-like [Brachypodium
           distachyon]
          Length = 580

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 27/40 (67%), Positives = 28/40 (70%)
 Frame = -2

Query: 322 LIDGCQWTKYG*KMAKGNSCP*AYSWATMATKYLVHKQVQ 203
           + DGCQW KYG KMAKGN CP AY   TMAT   V KQVQ
Sbjct: 308 IADGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQ 347



 Score = 38.5 bits (88), Expect(2) = 2e-11
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = -1

Query: 140 DDCTRLIATYESNHNHLLTPAAMSMTLISSIICFLLL 30
           +D T LI TYE  HNH L PAAM+M   +S    +LL
Sbjct: 351 EDRTILITTYEGTHNHPLPPAAMAMASTTSAAASMLL 387


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