BLASTX nr result

ID: Coptis25_contig00022602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022602
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335271.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
gb|AFT92000.1| stress responsive A/B barrel domain family protei...   115   4e-24
gb|AFT91999.1| stress responsive A/B barrel domain family protei...   115   4e-24
ref|XP_002313655.1| predicted protein [Populus trichocarpa] gi|1...   112   3e-23
ref|XP_002268144.1| PREDICTED: uncharacterized protein At5g22580...   112   3e-23

>ref|XP_002335271.1| predicted protein [Populus trichocarpa]
           gi|224131636|ref|XP_002328071.1| predicted protein
           [Populus trichocarpa] gi|222833185|gb|EEE71662.1|
           predicted protein [Populus trichocarpa]
           gi|222837586|gb|EEE75951.1| predicted protein [Populus
           trichocarpa]
          Length = 110

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/99 (60%), Positives = 69/99 (69%)
 Frame = +3

Query: 39  AVAMGDWKHXXXXXXXXXXXXXXILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 218
           A AMG+ KH              I+KGMEKLVSEVD V+SFEWGQDT    MLTQGFTH 
Sbjct: 3   AGAMGEIKHLVVVKFKEGVAIEEIIKGMEKLVSEVDLVKSFEWGQDTEGPEMLTQGFTHS 62

Query: 219 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 335
           FSMTF   E++AAFQSHP+HV +S +FSAAIEKI +  F
Sbjct: 63  FSMTFDKKEDYAAFQSHPNHVEYSATFSAAIEKIAVLCF 101


>gb|AFT92000.1| stress responsive A/B barrel domain family protein [Populus alba x
           Populus tremula var. glandulosa]
           gi|407260787|gb|AFT92012.1| stress responsive A/B barrel
           domain family protein [Populus alba x Populus tremula
           var. glandulosa]
          Length = 110

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/99 (59%), Positives = 70/99 (70%)
 Frame = +3

Query: 39  AVAMGDWKHXXXXXXXXXXXXXXILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 218
           A AMG+ KH              I+KGMEKLVSEVD V+SFEWGQD+    MLTQGFTH 
Sbjct: 3   AEAMGEIKHLVVVKFKEGAVVEDIVKGMEKLVSEVDLVKSFEWGQDSEGPEMLTQGFTHS 62

Query: 219 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 335
           FSMTF   E++AAFQSHP+HV +S +FSAAIEKI++  F
Sbjct: 63  FSMTFDKKEDYAAFQSHPNHVEYSATFSAAIEKIVVLCF 101


>gb|AFT91999.1| stress responsive A/B barrel domain family protein [Populus
           tomentosa] gi|407260785|gb|AFT92011.1| stress responsive
           A/B barrel domain family protein [Populus tomentosa]
          Length = 110

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/99 (59%), Positives = 70/99 (70%)
 Frame = +3

Query: 39  AVAMGDWKHXXXXXXXXXXXXXXILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 218
           A AMG+ KH              I+KGMEKLVSEVD V+SFEWGQD+    MLTQGFTH 
Sbjct: 3   AEAMGEIKHLVVVKFKEGAVVEDIVKGMEKLVSEVDLVKSFEWGQDSEGPEMLTQGFTHS 62

Query: 219 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 335
           FSMTF   E++AAFQSHP+HV +S +FSAAIEKI++  F
Sbjct: 63  FSMTFDKKEDYAAFQSHPNHVEYSATFSAAIEKIVVLCF 101


>ref|XP_002313655.1| predicted protein [Populus trichocarpa] gi|118484440|gb|ABK94096.1|
           unknown [Populus trichocarpa]
           gi|222850063|gb|EEE87610.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/99 (58%), Positives = 68/99 (68%)
 Frame = +3

Query: 39  AVAMGDWKHXXXXXXXXXXXXXXILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 218
           A AMG+ KH              I+KGMEKLVSEVD V+SFEWGQD+    MLTQGFTH 
Sbjct: 3   AEAMGEIKHLVVVKFKEGVVVEDIVKGMEKLVSEVDLVKSFEWGQDSEGPEMLTQGFTHS 62

Query: 219 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 335
           FSMTF   E+  AFQSHP+HV +S +FSAAIEKI++  F
Sbjct: 63  FSMTFDKKEDHVAFQSHPNHVEYSATFSAAIEKIVVLCF 101


>ref|XP_002268144.1| PREDICTED: uncharacterized protein At5g22580 [Vitis vinifera]
           gi|147803505|emb|CAN68720.1| hypothetical protein
           VITISV_033679 [Vitis vinifera]
          Length = 105

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/96 (57%), Positives = 68/96 (70%)
 Frame = +3

Query: 48  MGDWKHXXXXXXXXXXXXXXILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHIFSM 227
           MGD+KH              I+KGMEKLV+++D+V+SFEWGQD  +  ML QGFTH F M
Sbjct: 1   MGDFKHLVVAKFKEGVAVEEIVKGMEKLVADIDAVKSFEWGQDLESQEMLRQGFTHAFLM 60

Query: 228 TFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 335
           TF +  +F AF SHP+HV FST+FSAAIEKI+L DF
Sbjct: 61  TFNNQGDFTAFLSHPNHVEFSTTFSAAIEKIVLLDF 96


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