BLASTX nr result

ID: Coptis25_contig00022027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022027
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocar...    61   8e-08
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    60   1e-07
ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trich...    60   2e-07
emb|CAN82921.1| hypothetical protein VITISV_033138 [Vitis vinifera]    60   2e-07
ref|XP_002332297.1| cc-nbs resistance protein [Populus trichocar...    59   4e-07

>ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832457|gb|EEE70934.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 566

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/71 (43%), Positives = 47/71 (66%)
 Frame = -1

Query: 214 ALAYVVLEQLTSIIRREVKKEVKLMVGVREEIGKLSSALTMLQAVLDDXXXXXXXXXXXK 35
           AL   +LEQLT+I+ ++V++EV L+VGV++ + KL S L  +Q+VL+D           +
Sbjct: 4   ALVSPILEQLTTIVAQQVQEEVNLVVGVKKHVDKLKSNLLAIQSVLEDADRKQVKDKAVR 63

Query: 34  LWLEKLKDVVY 2
            WL+KLKDV Y
Sbjct: 64  DWLDKLKDVCY 74


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/71 (43%), Positives = 48/71 (67%)
 Frame = -1

Query: 214 ALAYVVLEQLTSIIRREVKKEVKLMVGVREEIGKLSSALTMLQAVLDDXXXXXXXXXXXK 35
           AL  VVL+QLTSI++ E+++E +L+ G  EE+ KL++ALT ++AVL+D           +
Sbjct: 4   ALVSVVLQQLTSILQAEIQQEARLLFGGPEEVQKLTTALTAIRAVLNDAEKKQVKESSVQ 63

Query: 34  LWLEKLKDVVY 2
           +WLE LK + Y
Sbjct: 64  VWLEGLKAISY 74


>ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874921|gb|EEF12052.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 963

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/71 (47%), Positives = 46/71 (64%)
 Frame = -1

Query: 214 ALAYVVLEQLTSIIRREVKKEVKLMVGVREEIGKLSSALTMLQAVLDDXXXXXXXXXXXK 35
           AL  VVLEQL+SII +EV++EV+L+VGV  E+ KL+S    +QA+  D           K
Sbjct: 4   ALVSVVLEQLSSIIIQEVQREVRLVVGVENEVKKLTSNFQAIQAMFADAEERQLKDQLVK 63

Query: 34  LWLEKLKDVVY 2
            WL++LKDV Y
Sbjct: 64  HWLDQLKDVSY 74


>emb|CAN82921.1| hypothetical protein VITISV_033138 [Vitis vinifera]
          Length = 699

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 47/71 (66%)
 Frame = -1

Query: 214 ALAYVVLEQLTSIIRREVKKEVKLMVGVREEIGKLSSALTMLQAVLDDXXXXXXXXXXXK 35
           AL  +VLE+L S+++++++++V L+VGV+ E+  L S L  ++AVL D           K
Sbjct: 4   ALVSIVLERLASVLKQQIRQQVTLVVGVKSEVDNLKSTLQSIRAVLGDAEKRQFTEELVK 63

Query: 34  LWLEKLKDVVY 2
           +WLE+LKD+ Y
Sbjct: 64  VWLERLKDISY 74


>ref|XP_002332297.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832459|gb|EEE70936.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 571

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = -1

Query: 214 ALAYVVLEQLTSIIRREVKKEVKLMVGVREEIGKLSSALTMLQAVLDDXXXXXXXXXXXK 35
           AL   +LEQLT I+ +EV++EV L+VGV++++ KL S L  + +VL+D           +
Sbjct: 4   ALLSPILEQLTRIVAQEVQEEVNLVVGVKKQVDKLKSNLLAMHSVLEDADRKQVKDEAVR 63

Query: 34  LWLEKLKDVVY 2
            W++KLKDV Y
Sbjct: 64  DWVDKLKDVCY 74


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