BLASTX nr result

ID: Coptis25_contig00021854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021854
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Viti...   169   3e-53
emb|CBI16271.3| unnamed protein product [Vitis vinifera]              169   3e-53
emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]   169   3e-53
ref|XP_003606477.1| Defects in morphology protein-like protein [...   166   4e-52
ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glyc...   166   4e-52

>ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Vitis vinifera]
          Length = 442

 Score =  169 bits (429), Expect(2) = 3e-53
 Identities = 79/131 (60%), Positives = 100/131 (76%)
 Frame = +2

Query: 2   FVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKLQLMCYKYIWDN 181
           FV+GVWMVGVIDEIR+P T++  +P LVE KTR QA  PAE Q+RNG+LQLMCYK +WD+
Sbjct: 248 FVEGVWMVGVIDEIRMPETEANRNPILVETKTRAQARSPAEPQQRNGRLQLMCYKRLWDS 307

Query: 182 IVTNSFPTSPFYVYFGLNAQYILSEEVQDLAAASGFPAKTLDDLVVYYMNTCSTLSTARD 361
           +  NSFP+  FY +F LN  YILSEE+++    SGFPA+TLDDL+ Y+ N C  L  A D
Sbjct: 308 LAANSFPSRQFYDFFALNPHYILSEEIRENTVNSGFPAETLDDLLRYFSNMCCMLPPADD 367

Query: 362 ELLIRYEFQGD 394
           +LL+RYE+Q D
Sbjct: 368 QLLLRYEYQED 378



 Score = 65.1 bits (157), Expect(2) = 3e-53
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +3

Query: 486 RYEFQGDHSLLGEEKFAYDNAWLLSQLKCSLDFWFGERQASY 611
           RYE+Q DHSLLGE++F YD+ W   Q++C L+FW GER+A+Y
Sbjct: 372 RYEYQEDHSLLGEDRFMYDSDWANRQIRCCLEFWLGEREANY 413


>emb|CBI16271.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  169 bits (429), Expect(2) = 3e-53
 Identities = 79/131 (60%), Positives = 100/131 (76%)
 Frame = +2

Query: 2   FVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKLQLMCYKYIWDN 181
           FV+GVWMVGVIDEIR+P T++  +P LVE KTR QA  PAE Q+RNG+LQLMCYK +WD+
Sbjct: 185 FVEGVWMVGVIDEIRMPETEANRNPILVETKTRAQARSPAEPQQRNGRLQLMCYKRLWDS 244

Query: 182 IVTNSFPTSPFYVYFGLNAQYILSEEVQDLAAASGFPAKTLDDLVVYYMNTCSTLSTARD 361
           +  NSFP+  FY +F LN  YILSEE+++    SGFPA+TLDDL+ Y+ N C  L  A D
Sbjct: 245 LAANSFPSRQFYDFFALNPHYILSEEIRENTVNSGFPAETLDDLLRYFSNMCCMLPPADD 304

Query: 362 ELLIRYEFQGD 394
           +LL+RYE+Q D
Sbjct: 305 QLLLRYEYQED 315



 Score = 65.1 bits (157), Expect(2) = 3e-53
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +3

Query: 486 RYEFQGDHSLLGEEKFAYDNAWLLSQLKCSLDFWFGERQASY 611
           RYE+Q DHSLLGE++F YD+ W   Q++C L+FW GER+A+Y
Sbjct: 309 RYEYQEDHSLLGEDRFMYDSDWANRQIRCCLEFWLGEREANY 350


>emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]
          Length = 402

 Score =  169 bits (428), Expect(2) = 3e-53
 Identities = 79/131 (60%), Positives = 100/131 (76%)
 Frame = +2

Query: 2   FVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKLQLMCYKYIWDN 181
           FV+GVWMVGVIDEIR+P T++  +P LVE KTR QA  PAE Q+RNG+LQLMCYK +WD+
Sbjct: 208 FVEGVWMVGVIDEIRMPETEANRNPILVETKTRAQARSPAEPQQRNGRLQLMCYKRLWDS 267

Query: 182 IVTNSFPTSPFYVYFGLNAQYILSEEVQDLAAASGFPAKTLDDLVVYYMNTCSTLSTARD 361
           +  NSFP+  FY +F LN  YILSEE+++    SGFPA+TLDDL+ Y+ N C  L  A D
Sbjct: 268 LAANSFPSRQFYDFFALNPHYILSEEIRENTXNSGFPAETLDDLLRYFSNMCCMLPPADD 327

Query: 362 ELLIRYEFQGD 394
           +LL+RYE+Q D
Sbjct: 328 QLLLRYEYQED 338



 Score = 65.1 bits (157), Expect(2) = 3e-53
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +3

Query: 486 RYEFQGDHSLLGEEKFAYDNAWLLSQLKCSLDFWFGERQASY 611
           RYE+Q DHSLLGE++F YD+ W   Q++C L+FW GER+A+Y
Sbjct: 332 RYEYQEDHSLLGEDRFMYDSDWANRQIRCCLEFWLGEREANY 373


>ref|XP_003606477.1| Defects in morphology protein-like protein [Medicago truncatula]
           gi|357472389|ref|XP_003606479.1| Defects in morphology
           protein-like protein [Medicago truncatula]
           gi|355507532|gb|AES88674.1| Defects in morphology
           protein-like protein [Medicago truncatula]
           gi|355507534|gb|AES88676.1| Defects in morphology
           protein-like protein [Medicago truncatula]
          Length = 407

 Score =  166 bits (421), Expect(2) = 4e-52
 Identities = 75/131 (57%), Positives = 102/131 (77%)
 Frame = +2

Query: 2   FVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKLQLMCYKYIWDN 181
           F + +WMVG+IDE+R+P T++  +P L++ KTR + TLPAE Q+RNG+LQLMCYKY+WDN
Sbjct: 202 FAEDIWMVGIIDEVRMPLTENDHNPILIDTKTRARDTLPAEPQRRNGRLQLMCYKYMWDN 261

Query: 182 IVTNSFPTSPFYVYFGLNAQYILSEEVQDLAAASGFPAKTLDDLVVYYMNTCSTLSTARD 361
           +V ++FP+  F+ YFGLN Q IL E+++ L+A SGF A TLDD+V YY NT   LS A D
Sbjct: 262 LVADNFPSKDFFTYFGLNPQSILCEDLRVLSADSGFSATTLDDVVRYYRNTYMMLSPAND 321

Query: 362 ELLIRYEFQGD 394
           +LL+RYE+Q D
Sbjct: 322 QLLLRYEYQKD 332



 Score = 64.3 bits (155), Expect(2) = 4e-52
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +3

Query: 486 RYEFQGDHSLLGEEKFAYDNAWLLSQLKCSLDFWFGERQASYV 614
           RYE+Q DHSLL E+KFAYD  WL +Q++  ++FW GER+A+YV
Sbjct: 326 RYEYQKDHSLLCEDKFAYDAVWLKNQIRSCIEFWLGEREAAYV 368


>ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glycine max]
          Length = 388

 Score =  166 bits (420), Expect(2) = 4e-52
 Identities = 75/131 (57%), Positives = 99/131 (75%)
 Frame = +2

Query: 2   FVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKLQLMCYKYIWDN 181
           F + +WMVGVIDEIR+P T++  +P L++ KTR + TLPAE Q+RNG+LQLMCYKY+WDN
Sbjct: 184 FAEDIWMVGVIDEIRMPLTENDHNPILIDTKTRSRDTLPAEPQRRNGRLQLMCYKYLWDN 243

Query: 182 IVTNSFPTSPFYVYFGLNAQYILSEEVQDLAAASGFPAKTLDDLVVYYMNTCSTLSTARD 361
           +V + FP+  F+ YFGLN Q  L E+++ + A SGF A TLDD V YY NTC  L+ A D
Sbjct: 244 LVADDFPSEKFFTYFGLNPQNNLCEDLKVIGADSGFSASTLDDAVRYYRNTCRMLAPAHD 303

Query: 362 ELLIRYEFQGD 394
           +LL+RYE+Q D
Sbjct: 304 QLLLRYEYQKD 314



 Score = 64.7 bits (156), Expect(2) = 4e-52
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +3

Query: 486 RYEFQGDHSLLGEEKFAYDNAWLLSQLKCSLDFWFGERQASY 611
           RYE+Q DHSLLGE KFAYD  WL +QL+  L+FW GE++A+Y
Sbjct: 308 RYEYQKDHSLLGEVKFAYDRDWLKNQLRSCLEFWLGEQEATY 349


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