BLASTX nr result

ID: Coptis25_contig00020861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020861
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509865.1| hypothetical protein RCOM_1689130 [Ricinus c...   130   1e-28
emb|CBI34395.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002272901.1| PREDICTED: uncharacterized protein LOC100260...   126   2e-27
ref|XP_002298009.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002872569.1| transducin family protein [Arabidopsis lyrat...   124   1e-26

>ref|XP_002509865.1| hypothetical protein RCOM_1689130 [Ricinus communis]
           gi|223549764|gb|EEF51252.1| hypothetical protein
           RCOM_1689130 [Ricinus communis]
          Length = 1525

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/136 (48%), Positives = 84/136 (61%), Gaps = 16/136 (11%)
 Frame = +1

Query: 1   ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSGLEVWPMAMLCGHAA 180
           ++CIW  +PP H++T+TA LN P TLYTG SDGSI  W  S + S  E+ P+AMLCGHAA
Sbjct: 6   VACIWPDTPPSHKVTATASLNHPPTLYTGGSDGSIFQWNISFSGSNSEIKPVAMLCGHAA 65

Query: 181 TISGLHICSP--TTGDENLTNN--------------ALISASTDGVLCIWSXXXXXXXXX 312
            I+ L IC P   +GD+N +++              AL+SA  DGVLC+WS         
Sbjct: 66  PIADLSICYPVVVSGDDNESDHSINGSSTSISDNQGALLSACLDGVLCVWSRGSGHCRRR 125

Query: 313 XKMPPWVGSPSSLSTL 360
            K+PPWVGSPS L TL
Sbjct: 126 RKLPPWVGSPSILHTL 141


>emb|CBI34395.3| unnamed protein product [Vitis vinifera]
          Length = 1521

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
 Frame = +1

Query: 1   ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSGLEVWPMAMLCGHAA 180
           ++CIWS +PP H IT+ AVL +P +LYTG SDGSI+ W  S T S  E+ P+AMLCGHAA
Sbjct: 34  VACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPEIKPIAMLCGHAA 93

Query: 181 TISGLHICSPTTGDEN--------LTNNALISASTDGVLCIWSXXXXXXXXXXKMPPWVG 336
            ++ L IC P   + +          + ALISA TDGVLC WS          KMPPWVG
Sbjct: 94  PLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPWVG 153

Query: 337 SPSSLSTL 360
           SPS +  L
Sbjct: 154 SPSMIRAL 161


>ref|XP_002272901.1| PREDICTED: uncharacterized protein LOC100260315 [Vitis vinifera]
          Length = 1516

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 10/130 (7%)
 Frame = +1

Query: 1   ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSG--LEVWPMAMLCGH 174
           ++CIWS +PP H IT+ AVL +P +LYTG SDGSI+ W  S T S   +E+ P+AMLCGH
Sbjct: 6   VACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPVIEIKPIAMLCGH 65

Query: 175 AATISGLHICSPTTGDEN--------LTNNALISASTDGVLCIWSXXXXXXXXXXKMPPW 330
           AA ++ L IC P   + +          + ALISA TDGVLC WS          KMPPW
Sbjct: 66  AAPLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPW 125

Query: 331 VGSPSSLSTL 360
           VGSPS +  L
Sbjct: 126 VGSPSMIRAL 135


>ref|XP_002298009.1| predicted protein [Populus trichocarpa] gi|222845267|gb|EEE82814.1|
           predicted protein [Populus trichocarpa]
          Length = 1500

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 16/136 (11%)
 Frame = +1

Query: 1   ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSGLEVWPMAMLCGHAA 180
           ++CIW  +PP H++T++A LN P TLYTG SDGSI+ W  SS+ S  E+ P+AMLCGHAA
Sbjct: 6   VACIWPDTPPSHKVTASASLNHPPTLYTGGSDGSILCWNLSSSDSNTEIKPVAMLCGHAA 65

Query: 181 TISGLHICSP--TTGDENLTN--------------NALISASTDGVLCIWSXXXXXXXXX 312
            I+ L IC P   TG++  T               +ALISA   GVLC+WS         
Sbjct: 66  PIADLSICCPMVVTGEDTKTKCSSNGDGSSASDTYDALISACKFGVLCVWSRGSGHCRRR 125

Query: 313 XKMPPWVGSPSSLSTL 360
            K+PPWVGSP  + TL
Sbjct: 126 RKLPPWVGSPCFVRTL 141


>ref|XP_002872569.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318406|gb|EFH48828.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1468

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 23/143 (16%)
 Frame = +1

Query: 1   ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTH--------SGLEVWPM 156
           ++C+WS +PP H +T+TA L  P TLYTG SDGSII W+ SS+         S  E+ P+
Sbjct: 6   VACLWSRAPPSHRVTATASLTNPPTLYTGGSDGSIIWWSISSSSESNSVTRLSSSEIKPI 65

Query: 157 AMLCGHAATISGLHICSPTTGDENLTNN---------------ALISASTDGVLCIWSXX 291
           AMLCGH A I  L +C PTT   N   +               ALISA +DGVLC+WS  
Sbjct: 66  AMLCGHTAPIVDLAVCDPTTVSGNGVTSDCSDNGNADPFVNCCALISACSDGVLCVWSRS 125

Query: 292 XXXXXXXXKMPPWVGSPSSLSTL 360
                   K+PPWVGSPS L TL
Sbjct: 126 SGHCRRRRKLPPWVGSPSILCTL 148


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