BLASTX nr result
ID: Coptis25_contig00020861
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020861 (360 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509865.1| hypothetical protein RCOM_1689130 [Ricinus c... 130 1e-28 emb|CBI34395.3| unnamed protein product [Vitis vinifera] 129 2e-28 ref|XP_002272901.1| PREDICTED: uncharacterized protein LOC100260... 126 2e-27 ref|XP_002298009.1| predicted protein [Populus trichocarpa] gi|2... 126 2e-27 ref|XP_002872569.1| transducin family protein [Arabidopsis lyrat... 124 1e-26 >ref|XP_002509865.1| hypothetical protein RCOM_1689130 [Ricinus communis] gi|223549764|gb|EEF51252.1| hypothetical protein RCOM_1689130 [Ricinus communis] Length = 1525 Score = 130 bits (327), Expect = 1e-28 Identities = 66/136 (48%), Positives = 84/136 (61%), Gaps = 16/136 (11%) Frame = +1 Query: 1 ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSGLEVWPMAMLCGHAA 180 ++CIW +PP H++T+TA LN P TLYTG SDGSI W S + S E+ P+AMLCGHAA Sbjct: 6 VACIWPDTPPSHKVTATASLNHPPTLYTGGSDGSIFQWNISFSGSNSEIKPVAMLCGHAA 65 Query: 181 TISGLHICSP--TTGDENLTNN--------------ALISASTDGVLCIWSXXXXXXXXX 312 I+ L IC P +GD+N +++ AL+SA DGVLC+WS Sbjct: 66 PIADLSICYPVVVSGDDNESDHSINGSSTSISDNQGALLSACLDGVLCVWSRGSGHCRRR 125 Query: 313 XKMPPWVGSPSSLSTL 360 K+PPWVGSPS L TL Sbjct: 126 RKLPPWVGSPSILHTL 141 >emb|CBI34395.3| unnamed protein product [Vitis vinifera] Length = 1521 Score = 129 bits (324), Expect = 2e-28 Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 8/128 (6%) Frame = +1 Query: 1 ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSGLEVWPMAMLCGHAA 180 ++CIWS +PP H IT+ AVL +P +LYTG SDGSI+ W S T S E+ P+AMLCGHAA Sbjct: 34 VACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPEIKPIAMLCGHAA 93 Query: 181 TISGLHICSPTTGDEN--------LTNNALISASTDGVLCIWSXXXXXXXXXXKMPPWVG 336 ++ L IC P + + + ALISA TDGVLC WS KMPPWVG Sbjct: 94 PLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPWVG 153 Query: 337 SPSSLSTL 360 SPS + L Sbjct: 154 SPSMIRAL 161 >ref|XP_002272901.1| PREDICTED: uncharacterized protein LOC100260315 [Vitis vinifera] Length = 1516 Score = 126 bits (316), Expect = 2e-27 Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 10/130 (7%) Frame = +1 Query: 1 ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSG--LEVWPMAMLCGH 174 ++CIWS +PP H IT+ AVL +P +LYTG SDGSI+ W S T S +E+ P+AMLCGH Sbjct: 6 VACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPVIEIKPIAMLCGH 65 Query: 175 AATISGLHICSPTTGDEN--------LTNNALISASTDGVLCIWSXXXXXXXXXXKMPPW 330 AA ++ L IC P + + + ALISA TDGVLC WS KMPPW Sbjct: 66 AAPLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPW 125 Query: 331 VGSPSSLSTL 360 VGSPS + L Sbjct: 126 VGSPSMIRAL 135 >ref|XP_002298009.1| predicted protein [Populus trichocarpa] gi|222845267|gb|EEE82814.1| predicted protein [Populus trichocarpa] Length = 1500 Score = 126 bits (316), Expect = 2e-27 Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 16/136 (11%) Frame = +1 Query: 1 ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTHSGLEVWPMAMLCGHAA 180 ++CIW +PP H++T++A LN P TLYTG SDGSI+ W SS+ S E+ P+AMLCGHAA Sbjct: 6 VACIWPDTPPSHKVTASASLNHPPTLYTGGSDGSILCWNLSSSDSNTEIKPVAMLCGHAA 65 Query: 181 TISGLHICSP--TTGDENLTN--------------NALISASTDGVLCIWSXXXXXXXXX 312 I+ L IC P TG++ T +ALISA GVLC+WS Sbjct: 66 PIADLSICCPMVVTGEDTKTKCSSNGDGSSASDTYDALISACKFGVLCVWSRGSGHCRRR 125 Query: 313 XKMPPWVGSPSSLSTL 360 K+PPWVGSP + TL Sbjct: 126 RKLPPWVGSPCFVRTL 141 >ref|XP_002872569.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] gi|297318406|gb|EFH48828.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] Length = 1468 Score = 124 bits (310), Expect = 1e-26 Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 23/143 (16%) Frame = +1 Query: 1 ISCIWSPSPPLHEITSTAVLNQPQTLYTGASDGSIISWAFSSTH--------SGLEVWPM 156 ++C+WS +PP H +T+TA L P TLYTG SDGSII W+ SS+ S E+ P+ Sbjct: 6 VACLWSRAPPSHRVTATASLTNPPTLYTGGSDGSIIWWSISSSSESNSVTRLSSSEIKPI 65 Query: 157 AMLCGHAATISGLHICSPTTGDENLTNN---------------ALISASTDGVLCIWSXX 291 AMLCGH A I L +C PTT N + ALISA +DGVLC+WS Sbjct: 66 AMLCGHTAPIVDLAVCDPTTVSGNGVTSDCSDNGNADPFVNCCALISACSDGVLCVWSRS 125 Query: 292 XXXXXXXXKMPPWVGSPSSLSTL 360 K+PPWVGSPS L TL Sbjct: 126 SGHCRRRRKLPPWVGSPSILCTL 148