BLASTX nr result

ID: Coptis25_contig00020089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020089
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329797.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-66
ref|XP_002305781.1| predicted protein [Populus trichocarpa] gi|2...   254   1e-65
gb|AAF16758.1|AC010155_11 F3M18.23 [Arabidopsis thaliana]             253   2e-65
ref|NP_174156.1| receptor like protein 4 [Arabidopsis thaliana] ...   253   2e-65
ref|XP_002509445.1| serine-threonine protein kinase, plant-type,...   253   2e-65

>ref|XP_002329797.1| predicted protein [Populus trichocarpa] gi|222870859|gb|EEF07990.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  256 bits (654), Expect = 3e-66
 Identities = 118/156 (75%), Positives = 133/156 (85%)
 Frame = +3

Query: 195 LRISCGARTNVQTPPTNTLWFKDFAYTGGIPANASRSSYITPPLNTLRYFPLSDGPTNCY 374
           +RISCGAR NV T PTNTLWFKDFAYTGGIPANA+  SYI+PPL TLRYFPLS GP NCY
Sbjct: 1   MRISCGARLNVHTAPTNTLWFKDFAYTGGIPANATLPSYISPPLKTLRYFPLSSGPNNCY 60

Query: 375 NIGRVPQGHMYSVRIFFGLIKLPDFDNEPLFDISLQGTQIYSLNSGWSQVDDQSFTEGIV 554
           NI  VP GH Y+VR+FFGL   P+FDNEPLFDIS++GTQIYSL SGW+  DDQ FTE +V
Sbjct: 61  NINNVPSGH-YAVRVFFGLDGHPNFDNEPLFDISVEGTQIYSLKSGWTNQDDQVFTEALV 119

Query: 555 FVSDGTVSACFHSTGHGDPSILSIEILQIDDKGYYF 662
           F++DGT S CFHSTGHGDP+ILSIEILQ+DD+ YYF
Sbjct: 120 FLNDGTASLCFHSTGHGDPAILSIEILQVDDRAYYF 155


>ref|XP_002305781.1| predicted protein [Populus trichocarpa] gi|222848745|gb|EEE86292.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  254 bits (649), Expect = 1e-65
 Identities = 117/156 (75%), Positives = 135/156 (86%)
 Frame = +3

Query: 195 LRISCGARTNVQTPPTNTLWFKDFAYTGGIPANASRSSYITPPLNTLRYFPLSDGPTNCY 374
           +RISCGAR NV T PTNTLW+KDFAYTGGIPANA+R SYI+PPL TLRYFPLS GP NCY
Sbjct: 1   MRISCGARLNVHTAPTNTLWYKDFAYTGGIPANATRPSYISPPLKTLRYFPLSSGPNNCY 60

Query: 375 NIGRVPQGHMYSVRIFFGLIKLPDFDNEPLFDISLQGTQIYSLNSGWSQVDDQSFTEGIV 554
           NI RVP+GH Y+VR+FFGL    +FDNEPLFDIS++GTQIYSL SGW+  DDQ FTE +V
Sbjct: 61  NINRVPKGH-YTVRVFFGLDGHRNFDNEPLFDISIEGTQIYSLKSGWTNHDDQVFTEALV 119

Query: 555 FVSDGTVSACFHSTGHGDPSILSIEILQIDDKGYYF 662
           F++DGT S CFHSTGHGDP+ILSIEILQ++D+ YYF
Sbjct: 120 FLTDGTASICFHSTGHGDPAILSIEILQMEDRAYYF 155


>gb|AAF16758.1|AC010155_11 F3M18.23 [Arabidopsis thaliana]
          Length = 697

 Score =  253 bits (647), Expect = 2e-65
 Identities = 116/162 (71%), Positives = 134/162 (82%)
 Frame = +3

Query: 177 KPEPFALRISCGARTNVQTPPTNTLWFKDFAYTGGIPANASRSSYITPPLNTLRYFPLSD 356
           +P P+ALRISCGAR NV+TPPT  LWFKD AYTGG+PANA+  +YITPPL TLRYFP+S+
Sbjct: 23  RPAPYALRISCGARKNVRTPPTYALWFKDIAYTGGVPANATTPTYITPPLKTLRYFPISE 82

Query: 357 GPTNCYNIGRVPQGHMYSVRIFFGLIKLPDFDNEPLFDISLQGTQIYSLNSGWSQVDDQS 536
           GP NCYNI RVP+GH YSVRIFFGL+  P FD EPLFDIS++GTQI SL SGWS  DDQ 
Sbjct: 83  GPNNCYNIVRVPKGH-YSVRIFFGLVDQPSFDKEPLFDISIEGTQISSLKSGWSSQDDQV 141

Query: 537 FTEGIVFVSDGTVSACFHSTGHGDPSILSIEILQIDDKGYYF 662
           F E ++F+  GT + CFHSTGHGDP+ILSIEILQ+DDK Y F
Sbjct: 142 FAEALIFLLGGTATICFHSTGHGDPAILSIEILQVDDKAYSF 183


>ref|NP_174156.1| receptor like protein 4 [Arabidopsis thaliana]
           gi|332192839|gb|AEE30960.1| receptor like protein 4
           [Arabidopsis thaliana]
          Length = 626

 Score =  253 bits (647), Expect = 2e-65
 Identities = 116/162 (71%), Positives = 134/162 (82%)
 Frame = +3

Query: 177 KPEPFALRISCGARTNVQTPPTNTLWFKDFAYTGGIPANASRSSYITPPLNTLRYFPLSD 356
           +P P+ALRISCGAR NV+TPPT  LWFKD AYTGG+PANA+  +YITPPL TLRYFP+S+
Sbjct: 23  RPAPYALRISCGARKNVRTPPTYALWFKDIAYTGGVPANATTPTYITPPLKTLRYFPISE 82

Query: 357 GPTNCYNIGRVPQGHMYSVRIFFGLIKLPDFDNEPLFDISLQGTQIYSLNSGWSQVDDQS 536
           GP NCYNI RVP+GH YSVRIFFGL+  P FD EPLFDIS++GTQI SL SGWS  DDQ 
Sbjct: 83  GPNNCYNIVRVPKGH-YSVRIFFGLVDQPSFDKEPLFDISIEGTQISSLKSGWSSQDDQV 141

Query: 537 FTEGIVFVSDGTVSACFHSTGHGDPSILSIEILQIDDKGYYF 662
           F E ++F+  GT + CFHSTGHGDP+ILSIEILQ+DDK Y F
Sbjct: 142 FAEALIFLLGGTATICFHSTGHGDPAILSIEILQVDDKAYSF 183


>ref|XP_002509445.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223549344|gb|EEF50832.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 629

 Score =  253 bits (647), Expect = 2e-65
 Identities = 117/166 (70%), Positives = 139/166 (83%), Gaps = 4/166 (2%)
 Frame = +3

Query: 177 KPEPFALRISCGARTNVQTPPTNTLWFKDFAYTGGIPANASRSSYITPPLNTLRYFPLSD 356
           KP P+ +RISCGAR NV +PPTNTLW+KDFAYTGGIP NAS +SY+ PPL+TLRYFPLS+
Sbjct: 24  KPGPWVMRISCGARVNVHSPPTNTLWYKDFAYTGGIPTNASLTSYVAPPLSTLRYFPLSE 83

Query: 357 GPTNCYNIGRVPQGHMYSVRIFFGLIKL----PDFDNEPLFDISLQGTQIYSLNSGWSQV 524
           GP NCYNI RVP+GH YSVR+F+ L+      P+ DNEPLFDIS++GTQIYSL SGWS  
Sbjct: 84  GPNNCYNIKRVPKGH-YSVRVFYALVAHHDPDPNSDNEPLFDISVEGTQIYSLQSGWSSH 142

Query: 525 DDQSFTEGIVFVSDGTVSACFHSTGHGDPSILSIEILQIDDKGYYF 662
           DD+ FTE  VF++DGT S CFHSTGHGDP+ILSIEILQ+DD+ Y+F
Sbjct: 143 DDRVFTEAQVFLTDGTASICFHSTGHGDPAILSIEILQVDDRSYFF 188


Top